RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PKHD1P08F94 4074 aa10.37□□□□□ -0.75
USP39-206ENST00000448971 IGHV4-4A0A075B6R2 117 aa10.37□□□□□ -0.75
USP39-206ENST00000448971 LORP23490 312 aaPredicted RBP10.37□□□□□ -0.75
USP39-206ENST00000448971 GNG5P63218 68 aa10.37□□□□□ -0.75
USP39-206ENST00000448971 CD300CQ08708 224 aa10.37□□□□□ -0.75
USP39-206ENST00000448971 ZNF493Q6ZR52 646 aa10.37□□□□□ -0.75
USP39-206ENST00000448971 GOLT1AQ6ZVE7 132 aa10.37□□□□□ -0.75
USP39-206ENST00000448971 RNASE8Q8TDE3 154 aaKnown RBP10.37□□□□□ -0.75
USP39-206ENST00000448971 PLAC8L1A1L4L8 177 aa10.36□□□□□ -0.75
USP39-206ENST00000448971 SNURFLB1AK76 121 aa10.36□□□□□ -0.75
USP39-206ENST00000448971 DEFB130BP0DP73 79 aa10.36□□□□□ -0.75
USP39-206ENST00000448971 DEFB130AP0DP74 79 aa10.36□□□□□ -0.75
USP39-206ENST00000448971 TCTAP57738 103 aa10.36□□□□□ -0.75
USP39-206ENST00000448971 ZNF726P1Q15940 193 aa10.36□□□□□ -0.75
USP39-206ENST00000448971 PRR9Q5T870 116 aa10.36□□□□□ -0.75
USP39-206ENST00000448971 Q6ZNX1 250 aa10.36□□□□□ -0.75
USP39-206ENST00000448971 ZFAND2AQ8N6M9 145 aa10.36□□□□□ -0.75
USP39-206ENST00000448971 C5orf17Q8NAS9 161 aa10.36□□□□□ -0.75
USP39-206ENST00000448971 ST6GAL2Q96JF0 529 aa10.36□□□□□ -0.75
USP39-206ENST00000448971 TIMM8BQ9Y5J9 83 aaPredicted RBP10.36□□□□□ -0.75
USP39-206ENST00000448971 DNAH2Q9P225 4427 aa10.36□□□□□ -0.75
USP39-206ENST00000448971 TRBV7-9A0A0J9YWB2 115 aa10.35□□□□□ -0.75
USP39-206ENST00000448971 MAP1LC3B2A6NCE7 125 aa10.35□□□□□ -0.75
USP39-206ENST00000448971 CBY3A6NI87 242 aa10.35□□□□□ -0.75
USP39-206ENST00000448971 RGS13O14921 159 aa10.35□□□□□ -0.75
USP39-206ENST00000448971 NMBP08949 121 aa10.35□□□□□ -0.75
USP39-206ENST00000448971 FGF8P55075 233 aaPredicted RBP10.35□□□□□ -0.75
USP39-206ENST00000448971 EIF5AP63241 154 aaKnown RBP10.35□□□□□ -0.75
USP39-206ENST00000448971 TCTE3Q8IZS6 198 aa10.35□□□□□ -0.75
USP39-206ENST00000448971 MAP1LC3BQ9GZQ8 125 aa10.35□□□□□ -0.75
USP39-206ENST00000448971 NOP10Q9NPE3 64 aaKnown RBP10.35□□□□□ -0.75
USP39-206ENST00000448971 MUC4Q99102 2169 aa10.35□□□□□ -0.75
USP39-206ENST00000448971 GGTLC3B5MD39 225 aa10.34□□□□□ -0.75
USP39-206ENST00000448971 K7EQM0 130 aa10.34□□□□□ -0.75
USP39-206ENST00000448971 UBE2G2P60604 165 aa10.34□□□□□ -0.75
USP39-206ENST00000448971 TMUB2Q71RG4 321 aa10.34□□□□□ -0.75
USP39-206ENST00000448971 ARL6IP6Q8N6S5 226 aa10.34□□□□□ -0.75
USP39-206ENST00000448971 ZNF680Q8NEM1 530 aa10.34□□□□□ -0.75
USP39-206ENST00000448971 TMED6Q8WW62 240 aa10.34□□□□□ -0.75
USP39-206ENST00000448971 LENEPQ9Y5L5 61 aa10.34□□□□□ -0.75
USP39-206ENST00000448971 TRAV8-1A0A0A6YYK1 113 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 SERTM2A0A1B0GWG4 89 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 F6UZH7 168 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 FAM229AH3BQW9 127 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 TCRAP04437 139 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 SEC11BP0C7V7 166 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 TPT1P13693 172 aaKnown RBP10.33□□□□□ -0.76
USP39-206ENST00000448971 SUMO1P63165 101 aaKnown RBP10.33□□□□□ -0.76
USP39-206ENST00000448971 AKAP14Q86UN6 197 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 EIF4E3Q8N5X7 224 aaKnown RBP10.33□□□□□ -0.76
USP39-206ENST00000448971 STOML3Q8TAV4 291 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 SUN5Q8TC36 379 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 NDFIP1Q9BT67 221 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 NDUFAF3Q9BU61 184 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 TMPRSS5Q9H3S3 457 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 APLNQ9ULZ1 77 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 DNAH17Q9UFH2 4485 aa10.33□□□□□ -0.76
USP39-206ENST00000448971 IGHV1OR15-1A0A075B7D0 117 aa10.32□□□□□ -0.76
USP39-206ENST00000448971 A0A1W2PRE2 83 aa10.32□□□□□ -0.76
USP39-206ENST00000448971 ZNF324O75467 553 aaPredicted RBP10.32□□□□□ -0.76
USP39-206ENST00000448971 FAM213BQ8TBF2 198 aa10.32□□□□□ -0.76
USP39-206ENST00000448971 SGK494Q96LW2 274 aa10.32□□□□□ -0.76
USP39-206ENST00000448971 UMAD1C9J7I0 102 aa10.31□□□□□ -0.76
USP39-206ENST00000448971 IFNA7P01567 189 aa10.31□□□□□ -0.76
USP39-206ENST00000448971 ATP5G1P05496 136 aa10.31□□□□□ -0.76
USP39-206ENST00000448971 ATP5G3P48201 142 aa10.31□□□□□ -0.76
USP39-206ENST00000448971 FHITP49789 147 aa10.31□□□□□ -0.76
USP39-206ENST00000448971 MUC21Q5SSG8 566 aa10.31□□□□□ -0.76
USP39-206ENST00000448971 CYB561D1Q8N8Q1 229 aa10.31□□□□□ -0.76
USP39-206ENST00000448971 LINC00467Q9BRT7 94 aa10.31□□□□□ -0.76
USP39-206ENST00000448971 ATG101Q9BSB4 218 aa10.31□□□□□ -0.76
USP39-206ENST00000448971 TREM1Q9NP99 234 aa10.31□□□□□ -0.76
USP39-206ENST00000448971 NAGKQ9UJ70 344 aa10.31□□□□□ -0.76
USP39-206ENST00000448971 A0A1B0GV50 99 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 GAGE12BA1L429 117 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 F5H768 121 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 GAGE7O76087 117 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 C1QBP02746 253 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 GAGE12FP0CL80 117 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 GAGE12GP0CL81 117 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 GAGE12IP0CL82 117 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 ANXA2RQ3ZCQ2 193 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 ZFP69Q49AA0 526 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 Q6AWC8 147 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 Q6ZQT7 251 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 GSN-AS1Q9NRJ2 163 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 EPDR1Q9UM22 224 aa10.3□□□□□ -0.76
USP39-206ENST00000448971 DYNC1H1Q14204 4646 aaKnown RBP10.29□□□□□ -0.76
USP39-206ENST00000448971 FLI1Q01543 452 aaPredicted RBP10.29□□□□□ -0.76
USP39-206ENST00000448971 ZNF415Q09FC8 603 aa10.29□□□□□ -0.76
USP39-206ENST00000448971 IBA57Q5T440 356 aaKnown RBP10.29□□□□□ -0.76
USP39-206ENST00000448971 TMEM88Q6PEY1 159 aa10.29□□□□□ -0.76
USP39-206ENST00000448971 FAM159AQ6UWV7 190 aa10.29□□□□□ -0.76
USP39-206ENST00000448971 TMEM75Q8N9X5 138 aa10.29□□□□□ -0.76
USP39-206ENST00000448971 C11orf72Q8NBR9 251 aa10.29□□□□□ -0.76
USP39-206ENST00000448971 FAM210BQ96KR6 192 aa10.29□□□□□ -0.76
USP39-206ENST00000448971 TP53TG3Q9ULZ0 132 aa10.29□□□□□ -0.76
USP39-206ENST00000448971 TRGV1A0A0A0MS02 117 aa10.28□□□□□ -0.76
USP39-206ENST00000448971 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
USP39-206ENST00000448971 FAM74A7A6NL05 159 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms