RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 CST9LP1Q5W188 147 aa11.73□□□□□ -0.53
SF3A1-204ENST00000447376 ZNF767PQ75MW2 155 aa11.73□□□□□ -0.53
SF3A1-204ENST00000447376 CYB561D1Q8N8Q1 229 aa11.73□□□□□ -0.53
SF3A1-204ENST00000447376 FAM19A4Q96LR4 140 aa11.73□□□□□ -0.53
SF3A1-204ENST00000447376 TCEAL7Q9BRU2 100 aa11.73□□□□□ -0.53
SF3A1-204ENST00000447376 TRAV1-1A0A0B4J248 108 aa11.72□□□□□ -0.53
SF3A1-204ENST00000447376 A0A1B0GV50 99 aa11.72□□□□□ -0.53
SF3A1-204ENST00000447376 C7orf71A4D174 169 aa11.72□□□□□ -0.53
SF3A1-204ENST00000447376 LY6G6CO95867 125 aa11.72□□□□□ -0.53
SF3A1-204ENST00000447376 GNG5P63218 68 aa11.72□□□□□ -0.53
SF3A1-204ENST00000447376 TMEM263Q8WUH6 116 aaKnown RBP11.72□□□□□ -0.53
SF3A1-204ENST00000447376 HIST1H2BAQ96A08 127 aa11.72□□□□□ -0.53
SF3A1-204ENST00000447376 PYGO2Q9BRQ0 406 aa11.72□□□□□ -0.53
SF3A1-204ENST00000447376 ATG101Q9BSB4 218 aa11.72□□□□□ -0.53
SF3A1-204ENST00000447376 NDFIP1Q9BT67 221 aa11.72□□□□□ -0.53
SF3A1-204ENST00000447376 TIMM8BQ9Y5J9 83 aaPredicted RBP11.72□□□□□ -0.53
SF3A1-204ENST00000447376 SNURFLB1AK76 121 aa11.71□□□□□ -0.53
SF3A1-204ENST00000447376 KLLNB2CW77 178 aa11.71□□□□□ -0.53
SF3A1-204ENST00000447376 RNASE4P34096 147 aaKnown RBP11.71□□□□□ -0.53
SF3A1-204ENST00000447376 Q8TAT8 98 aa11.71□□□□□ -0.53
SF3A1-204ENST00000447376 LINC00476Q8WZB0 136 aa11.71□□□□□ -0.53
SF3A1-204ENST00000447376 PAGE4O60829 102 aa11.7□□□□□ -0.54
SF3A1-204ENST00000447376 HTN3P15516 51 aa11.7□□□□□ -0.54
SF3A1-204ENST00000447376 ALKAL2Q6UX46 152 aa11.7□□□□□ -0.54
SF3A1-204ENST00000447376 NDUFAF3Q9BU61 184 aa11.7□□□□□ -0.54
SF3A1-204ENST00000447376 MANBALQ9NQG1 85 aa11.7□□□□□ -0.54
SF3A1-204ENST00000447376 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
SF3A1-204ENST00000447376 IGHV4-4A0A075B6R2 117 aa11.69□□□□□ -0.54
SF3A1-204ENST00000447376 PEX7O00628 323 aa11.69□□□□□ -0.54
SF3A1-204ENST00000447376 RGS13O14921 159 aa11.69□□□□□ -0.54
SF3A1-204ENST00000447376 AZU1P20160 251 aa11.69□□□□□ -0.54
SF3A1-204ENST00000447376 BLOC1S1P78537 153 aa11.69□□□□□ -0.54
SF3A1-204ENST00000447376 FLI1Q01543 452 aaPredicted RBP11.69□□□□□ -0.54
SF3A1-204ENST00000447376 KIR3DS1Q14943 382 aa11.69□□□□□ -0.54
SF3A1-204ENST00000447376 ZFAND2AQ8N6M9 145 aa11.69□□□□□ -0.54
SF3A1-204ENST00000447376 TMEM75Q8N9X5 138 aa11.69□□□□□ -0.54
SF3A1-204ENST00000447376 ZNF680Q8NEM1 530 aa11.69□□□□□ -0.54
SF3A1-204ENST00000447376 TRAV8-1A0A0A6YYK1 113 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 CBY3A6NI87 242 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 IFNA1P01562 189 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 PRM2P04554 102 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 DEFB130BP0DP73 79 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 DEFB130AP0DP74 79 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 BTN1A1Q13410 526 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 SAPCD1Q5SSQ6 148 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 FAM210BQ96KR6 192 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 LYSTQ99698 3801 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 TREM1Q9NP99 234 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 GNG13Q9P2W3 67 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 PSG8Q9UQ74 426 aa11.68□□□□□ -0.54
SF3A1-204ENST00000447376 LGALS9CQ6DKI2 356 aa11.67□□□□□ -0.54
SF3A1-204ENST00000447376 EIF4E3Q8N5X7 224 aaKnown RBP11.67□□□□□ -0.54
SF3A1-204ENST00000447376 RNASE8Q8TDE3 154 aaKnown RBP11.67□□□□□ -0.54
SF3A1-204ENST00000447376 TXNDC17Q9BRA2 123 aa11.67□□□□□ -0.54
SF3A1-204ENST00000447376 DYNC2H1Q8NCM8 4307 aaKnown RBP11.67□□□□□ -0.54
SF3A1-204ENST00000447376 UBE2G1P62253 170 aa11.66□□□□□ -0.54
SF3A1-204ENST00000447376 PRNTQ86SH4 94 aa11.66□□□□□ -0.54
SF3A1-204ENST00000447376 SGK494Q96LW2 274 aa11.66□□□□□ -0.54
SF3A1-204ENST00000447376 NOP10Q9NPE3 64 aaKnown RBP11.66□□□□□ -0.54
SF3A1-204ENST00000447376 ZNF324O75467 553 aaPredicted RBP11.65□□□□□ -0.54
SF3A1-204ENST00000447376 ATP5G1P05496 136 aa11.65□□□□□ -0.54
SF3A1-204ENST00000447376 S100A9P06702 114 aaKnown RBP11.65□□□□□ -0.54
SF3A1-204ENST00000447376 TAGLN2P37802 199 aaKnown RBP11.65□□□□□ -0.54
SF3A1-204ENST00000447376 ATP5G3P48201 142 aa11.65□□□□□ -0.54
SF3A1-204ENST00000447376 CCL20P78556 96 aa11.65□□□□□ -0.54
SF3A1-204ENST00000447376 FMC1Q96HJ9 113 aa11.65□□□□□ -0.54
SF3A1-204ENST00000447376 LINC00467Q9BRT7 94 aa11.65□□□□□ -0.54
SF3A1-204ENST00000447376 APLNQ9ULZ1 77 aa11.65□□□□□ -0.54
SF3A1-204ENST00000447376 TRAV21A0A0B4J279 112 aa11.64□□□□□ -0.55
SF3A1-204ENST00000447376 PLAC8L1A1L4L8 177 aa11.64□□□□□ -0.55
SF3A1-204ENST00000447376 IGLV2-11P01706 119 aa11.64□□□□□ -0.55
SF3A1-204ENST00000447376 AKR1C3P42330 323 aa11.64□□□□□ -0.55
SF3A1-204ENST00000447376 ANXA2RQ3ZCQ2 193 aa11.64□□□□□ -0.55
SF3A1-204ENST00000447376 SMUG1Q53HV7 270 aa11.64□□□□□ -0.55
SF3A1-204ENST00000447376 PRR9Q5T870 116 aa11.64□□□□□ -0.55
SF3A1-204ENST00000447376 Q6AWC8 147 aa11.64□□□□□ -0.55
SF3A1-204ENST00000447376 IGHV1OR15-1A0A075B7D0 117 aa11.63□□□□□ -0.55
SF3A1-204ENST00000447376 TRAV34A0A0B4J273 112 aa11.63□□□□□ -0.55
SF3A1-204ENST00000447376 FAM159AQ6UWV7 190 aa11.63□□□□□ -0.55
SF3A1-204ENST00000447376 LINC00479Q96M42 142 aa11.63□□□□□ -0.55
SF3A1-204ENST00000447376 ZFP30Q9Y2G7 519 aa11.63□□□□□ -0.55
SF3A1-204ENST00000447376 KLF12Q9Y4X4 402 aa11.63□□□□□ -0.55
SF3A1-204ENST00000447376 ALMS1Q8TCU4 4167 aa11.62□□□□□ -0.55
SF3A1-204ENST00000447376 F5H768 121 aa11.62□□□□□ -0.55
SF3A1-204ENST00000447376 P0DMU3 169 aa11.62□□□□□ -0.55
SF3A1-204ENST00000447376 FAM231AP0DMU4 169 aa11.62□□□□□ -0.55
SF3A1-204ENST00000447376 FAM231CP0DMU5 169 aa11.62□□□□□ -0.55
SF3A1-204ENST00000447376 TMEM183BQ1AE95 376 aa11.62□□□□□ -0.55
SF3A1-204ENST00000447376 TVP23CQ96ET8 276 aa11.62□□□□□ -0.55
SF3A1-204ENST00000447376 TRBV6-1A0A0K0K1D8 114 aa11.61□□□□□ -0.55
SF3A1-204ENST00000447376 PDE6DO43924 150 aa11.61□□□□□ -0.55
SF3A1-204ENST00000447376 GCGP01275 180 aa11.61□□□□□ -0.55
SF3A1-204ENST00000447376 BCL2P10415 239 aa11.61□□□□□ -0.55
SF3A1-204ENST00000447376 MEF2BQ02080 365 aaPredicted RBP11.61□□□□□ -0.55
SF3A1-204ENST00000447376 ZNF415Q09FC8 603 aa11.61□□□□□ -0.55
SF3A1-204ENST00000447376 DAZ2Q13117 558 aaKnown RBP11.61□□□□□ -0.55
SF3A1-204ENST00000447376 IBA57Q5T440 356 aaKnown RBP11.61□□□□□ -0.55
SF3A1-204ENST00000447376 Q86TA4 180 aa11.61□□□□□ -0.55
SF3A1-204ENST00000447376 C15orf53Q8NAA6 179 aa11.61□□□□□ -0.55
SF3A1-204ENST00000447376 VAX2Q9UIW0 290 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms