RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 DEFB1P60022 68 aa10.99□□□□□ -0.65
ERCC3-203ENST00000445889 C15orf32Q32M92 178 aa10.99□□□□□ -0.65
ERCC3-203ENST00000445889 LCNL1Q6ZST4 164 aa10.99□□□□□ -0.65
ERCC3-203ENST00000445889 CHAC1Q9BUX1 264 aa10.99□□□□□ -0.65
ERCC3-203ENST00000445889 TMEM8BA6NDV4 472 aa10.99□□□□□ -0.65
ERCC3-203ENST00000445889 FABP5P3A8MUU1 101 aa10.99□□□□□ -0.65
ERCC3-203ENST00000445889 NDUFA3O95167 84 aa10.99□□□□□ -0.65
ERCC3-203ENST00000445889 RNF5Q99942 180 aa10.99□□□□□ -0.65
ERCC3-203ENST00000445889 IGKV3D-20A0A0C4DH25 116 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 IGKCP01834 107 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 EFNA4P52798 201 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 NPBQ8NG41 125 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 TRBV25-1A0A075B6N4 114 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 FCER1GP30273 86 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 IGF2-ASQ6U949 168 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 CLEC19AQ6UXS0 136 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 NEGR1Q7Z3B1 354 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 VMO1Q7Z5L0 202 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 S100A7AQ86SG5 101 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 SRSF8Q9BRL6 282 aaKnown RBP10.98□□□□□ -0.65
ERCC3-203ENST00000445889 IGHV7-81A0A0B4J1V7 117 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 TEX48A0A1B0GUV7 120 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 CEACAM3P40198 252 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 MAPKAPK5-AS1Q8N8E1 139 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 OR11H6Q8NGC7 330 aa10.98□□□□□ -0.65
ERCC3-203ENST00000445889 CCL21O00585 134 aa10.97□□□□□ -0.65
ERCC3-203ENST00000445889 IGF1P05019 195 aa10.97□□□□□ -0.65
ERCC3-203ENST00000445889 ZFP36P26651 326 aaKnown RBP10.97□□□□□ -0.65
ERCC3-203ENST00000445889 LY6G5BQ8NDX9 201 aa10.97□□□□□ -0.65
ERCC3-203ENST00000445889 AGPAT4-IT1Q9H0P7 198 aa10.97□□□□□ -0.65
ERCC3-203ENST00000445889 MRPL35Q9NZE8 188 aaKnown RBP10.97□□□□□ -0.65
ERCC3-203ENST00000445889 TTC9CQ8N5M4 171 aa10.96□□□□□ -0.65
ERCC3-203ENST00000445889 SMIM17P0DL12 118 aa10.96□□□□□ -0.66
ERCC3-203ENST00000445889 OR5A1Q8NGJ0 315 aa10.96□□□□□ -0.66
ERCC3-203ENST00000445889 SPG11Q96JI7 2443 aa10.95□□□□□ -0.66
ERCC3-203ENST00000445889 IGKV3-7A0A075B6H7 116 aa10.95□□□□□ -0.66
ERCC3-203ENST00000445889 PRTN3P24158 256 aa10.95□□□□□ -0.66
ERCC3-203ENST00000445889 AMTNQ6UX39 209 aa10.95□□□□□ -0.66
ERCC3-203ENST00000445889 NXT2Q9NPJ8 142 aaKnown RBP10.95□□□□□ -0.66
ERCC3-203ENST00000445889 IGHV3OR16-10A0A075B7F0 116 aa10.94□□□□□ -0.66
ERCC3-203ENST00000445889 ATP6V0E1O15342 81 aa10.94□□□□□ -0.66
ERCC3-203ENST00000445889 BUB3O43684 328 aa10.94□□□□□ -0.66
ERCC3-203ENST00000445889 DPM2O94777 84 aa10.94□□□□□ -0.66
ERCC3-203ENST00000445889 FOXC1Q12948 553 aa10.94□□□□□ -0.66
ERCC3-203ENST00000445889 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.94□□□□□ -0.66
ERCC3-203ENST00000445889 GTSF1LQ9H1H1 148 aa10.94□□□□□ -0.66
ERCC3-203ENST00000445889 ODF3BA8MYP8 253 aa10.93□□□□□ -0.66
ERCC3-203ENST00000445889 TIMD4Q96H15 378 aa10.93□□□□□ -0.66
ERCC3-203ENST00000445889 ZMAT4Q9H898 229 aa10.93□□□□□ -0.66
ERCC3-203ENST00000445889 MSRB2Q9Y3D2 182 aa10.93□□□□□ -0.66
ERCC3-203ENST00000445889 WFDC2Q14508 124 aa10.93□□□□□ -0.66
ERCC3-203ENST00000445889 SFTA2Q6UW10 78 aa10.93□□□□□ -0.66
ERCC3-203ENST00000445889 COX8CQ7Z4L0 72 aa10.93□□□□□ -0.66
ERCC3-203ENST00000445889 Q8N9W7 124 aa10.93□□□□□ -0.66
ERCC3-203ENST00000445889 PSMG3-AS1Q96PY0 264 aa10.93□□□□□ -0.66
ERCC3-203ENST00000445889 H3BMG7 143 aa10.92□□□□□ -0.66
ERCC3-203ENST00000445889 H3BVH4 76 aa10.92□□□□□ -0.66
ERCC3-203ENST00000445889 SPANXN1Q5VSR9 72 aa10.92□□□□□ -0.66
ERCC3-203ENST00000445889 CEND1Q8N111 149 aa10.92□□□□□ -0.66
ERCC3-203ENST00000445889 MYOZ3Q8TDC0 251 aa10.92□□□□□ -0.66
ERCC3-203ENST00000445889 CRYBG3Q68DQ2 2970 aa10.92□□□□□ -0.66
ERCC3-203ENST00000445889 NCOR2Q9Y618 2525 aa10.92□□□□□ -0.66
ERCC3-203ENST00000445889 TMEM219Q86XT9 240 aa10.92□□□□□ -0.66
ERCC3-203ENST00000445889 VKORC1Q9BQB6 163 aa10.92□□□□□ -0.66
ERCC3-203ENST00000445889 CLPSL1A2RUU4 121 aa10.91□□□□□ -0.66
ERCC3-203ENST00000445889 M0R381 172 aa10.91□□□□□ -0.66
ERCC3-203ENST00000445889 TCF15Q12870 199 aa10.91□□□□□ -0.66
ERCC3-203ENST00000445889 SH2D6Q7Z4S9 175 aa10.91□□□□□ -0.66
ERCC3-203ENST00000445889 CHD8Q9HCK8 2581 aa10.91□□□□□ -0.66
ERCC3-203ENST00000445889 Q8N8P6 123 aa10.91□□□□□ -0.66
ERCC3-203ENST00000445889 PHLDA1Q8WV24 401 aaPredicted RBP10.91□□□□□ -0.66
ERCC3-203ENST00000445889 PRR9Q5T870 116 aa10.91□□□□□ -0.66
ERCC3-203ENST00000445889 CCDC140Q96MF4 163 aa10.91□□□□□ -0.66
ERCC3-203ENST00000445889 HIST1H4GQ99525 98 aa10.91□□□□□ -0.66
ERCC3-203ENST00000445889 CNFNQ9BYD5 112 aa10.91□□□□□ -0.66
ERCC3-203ENST00000445889 ZFAND3Q9H8U3 227 aa10.91□□□□□ -0.66
ERCC3-203ENST00000445889 IGLV2-18A0A075B6J9 118 aa10.9□□□□□ -0.66
ERCC3-203ENST00000445889 TRAV8-2A0A0B4J237 113 aa10.9□□□□□ -0.66
ERCC3-203ENST00000445889 SMAGPQ0VAQ4 97 aa10.9□□□□□ -0.66
ERCC3-203ENST00000445889 LINC01559Q495D7 138 aa10.9□□□□□ -0.66
ERCC3-203ENST00000445889 GLMPQ8WWB7 406 aa10.9□□□□□ -0.66
ERCC3-203ENST00000445889 LAGE3Q14657 143 aa10.9□□□□□ -0.66
ERCC3-203ENST00000445889 TMEM78Q5T7P6 136 aa10.9□□□□□ -0.66
ERCC3-203ENST00000445889 ZNF502Q8TBZ5 544 aa10.9□□□□□ -0.66
ERCC3-203ENST00000445889 HIGD1BQ9P298 99 aa10.9□□□□□ -0.66
ERCC3-203ENST00000445889 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.9□□□□□ -0.673e-7■■■■■ 27.4
ERCC3-203ENST00000445889 IGHV7-4-1A0A0J9YVY3 117 aa10.89□□□□□ -0.67
ERCC3-203ENST00000445889 ATP5LO75964 103 aa10.89□□□□□ -0.67
ERCC3-203ENST00000445889 ETDBQ3ZM63 59 aa10.89□□□□□ -0.67
ERCC3-203ENST00000445889 WFDC12Q8WWY7 111 aa10.89□□□□□ -0.67
ERCC3-203ENST00000445889 TMEM190Q8WZ59 177 aa10.89□□□□□ -0.67
ERCC3-203ENST00000445889 ZNF479Q96JC4 524 aa10.89□□□□□ -0.67
ERCC3-203ENST00000445889 ZNF48Q96MX3 618 aaPredicted RBP10.89□□□□□ -0.67
ERCC3-203ENST00000445889 A0A1W2PPR1 153 aa10.89□□□□□ -0.67
ERCC3-203ENST00000445889 IGLL5B9A064 214 aa10.89□□□□□ -0.67
ERCC3-203ENST00000445889 C8orf86Q6ZUL3 223 aa10.89□□□□□ -0.67
ERCC3-203ENST00000445889 Q8N6K4 173 aa10.89□□□□□ -0.67
ERCC3-203ENST00000445889 NRACQ8N912 160 aa10.89□□□□□ -0.67
ERCC3-203ENST00000445889 HIF1ANQ9NWT6 349 aa10.89□□□□□ -0.67
ERCC3-203ENST00000445889 AZU1P20160 251 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms