RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 NDFIP1Q9BT67 221 aa7.85□□□□□ -1.15
HLA-F-221ENST00000444621 PKD1P98161 4303 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 TRGV2A0A075B6R0 118 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 IGHV1OR15-1A0A075B7D0 117 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 GAGE12BA1L429 117 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 PLAC8L1A1L4L8 177 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 HMGB3O15347 200 aaKnown RBP7.84□□□□□ -1.15
HLA-F-221ENST00000444621 ZNF324O75467 553 aaPredicted RBP7.84□□□□□ -1.15
HLA-F-221ENST00000444621 GAGE7O76087 117 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 NUDT3O95989 172 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 GAGE12FP0CL80 117 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 GAGE12GP0CL81 117 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 GAGE12IP0CL82 117 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 STAG3L2P0CL84 134 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 STAG3L3P0CL85 134 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 ARL14EPLP0DKL9 152 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 CD300CQ08708 224 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 DAZ2Q13117 558 aaKnown RBP7.84□□□□□ -1.15
HLA-F-221ENST00000444621 BTN1A1Q13410 526 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 Q5BKY6 102 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 AKR1C8PQ5T2L2 129 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 FAM159AQ6UWV7 190 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 ST6GAL2Q96JF0 529 aa7.84□□□□□ -1.15
HLA-F-221ENST00000444621 HSPG2P98160 4391 aa7.83□□□□□ -1.16
HLA-F-221ENST00000444621 ARPC5O15511 151 aa7.83□□□□□ -1.16
HLA-F-221ENST00000444621 GCHFRP30047 84 aa7.83□□□□□ -1.16
HLA-F-221ENST00000444621 CCL18P55774 89 aa7.83□□□□□ -1.16
HLA-F-221ENST00000444621 FAM3BP58499 235 aaPredicted RBP7.83□□□□□ -1.16
HLA-F-221ENST00000444621 ZNF415Q09FC8 603 aa7.83□□□□□ -1.16
HLA-F-221ENST00000444621 RPL7L1Q6DKI1 246 aaKnown RBP7.83□□□□□ -1.16
HLA-F-221ENST00000444621 GSN-AS1Q9NRJ2 163 aa7.83□□□□□ -1.16
HLA-F-221ENST00000444621 TRGV1A0A0A0MS02 117 aa7.82□□□□□ -1.16
HLA-F-221ENST00000444621 CTXND1A0A1B0GTU2 59 aa7.82□□□□□ -1.16
HLA-F-221ENST00000444621 FBLL1A6NHQ2 334 aaKnown RBP7.82□□□□□ -1.16
HLA-F-221ENST00000444621 IBA57Q5T440 356 aaKnown RBP7.82□□□□□ -1.16
HLA-F-221ENST00000444621 GOLT1AQ6ZVE7 132 aa7.82□□□□□ -1.16
HLA-F-221ENST00000444621 ZFAND2AQ8N6M9 145 aa7.82□□□□□ -1.16
HLA-F-221ENST00000444621 C5orf17Q8NAS9 161 aa7.82□□□□□ -1.16
HLA-F-221ENST00000444621 Q8TAT8 98 aa7.82□□□□□ -1.16
HLA-F-221ENST00000444621 STOML3Q8TAV4 291 aa7.82□□□□□ -1.16
HLA-F-221ENST00000444621 NKX6-2Q9C056 277 aaPredicted RBP7.82□□□□□ -1.16
HLA-F-221ENST00000444621 TRGV11A0A075B6L2 103 aa7.81□□□□□ -1.16
HLA-F-221ENST00000444621 TRAV21A0A0B4J279 112 aa7.81□□□□□ -1.16
HLA-F-221ENST00000444621 A0A0D9SG52 128 aa7.81□□□□□ -1.16
HLA-F-221ENST00000444621 A0A1B0GVY2 172 aa7.81□□□□□ -1.16
HLA-F-221ENST00000444621 RNF222A6NCQ9 220 aa7.81□□□□□ -1.16
HLA-F-221ENST00000444621 EIF3GO75821 320 aaKnown RBP eCLIP7.81□□□□□ -1.16
HLA-F-221ENST00000444621 PPT1P50897 306 aa7.81□□□□□ -1.16
HLA-F-221ENST00000444621 SUMO1P63165 101 aaKnown RBP7.81□□□□□ -1.16
HLA-F-221ENST00000444621 EIF5AP63241 154 aaKnown RBP7.81□□□□□ -1.16
HLA-F-221ENST00000444621 LGALS9BQ3B8N2 356 aa7.81□□□□□ -1.16
HLA-F-221ENST00000444621 ZFP69Q49AA0 526 aa7.81□□□□□ -1.16
HLA-F-221ENST00000444621 KCNS1Q96KK3 526 aa7.81□□□□□ -1.16
HLA-F-221ENST00000444621 SH3BGRL3Q9H299 93 aa7.81□□□□□ -1.16
HLA-F-221ENST00000444621 TREM1Q9NP99 234 aa7.81□□□□□ -1.16
HLA-F-221ENST00000444621 KANTRA0A1W2PQU2 76 aa7.8□□□□□ -1.16
HLA-F-221ENST00000444621 A0A1W2PRE2 83 aa7.8□□□□□ -1.16
HLA-F-221ENST00000444621 IFNA7P01567 189 aa7.8□□□□□ -1.16
HLA-F-221ENST00000444621 TCL1AP56279 114 aa7.8□□□□□ -1.16
HLA-F-221ENST00000444621 SLAQ13239 276 aa7.8□□□□□ -1.16
HLA-F-221ENST00000444621 SOHLH1Q5JUK2 328 aa7.8□□□□□ -1.16
HLA-F-221ENST00000444621 Q6AWC8 147 aa7.8□□□□□ -1.16
HLA-F-221ENST00000444621 LINC00336Q6ZUF6 198 aa7.8□□□□□ -1.16
HLA-F-221ENST00000444621 LINC00612Q8N6U2 182 aa7.8□□□□□ -1.16
HLA-F-221ENST00000444621 SPXQ9BT56 116 aa7.8□□□□□ -1.16
HLA-F-221ENST00000444621 NAGKQ9UJ70 344 aa7.8□□□□□ -1.16
HLA-F-221ENST00000444621 TRAV26-1A0A087WT03 109 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 HMSDA8MTL9 139 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 F6UZH7 168 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 H3BNG1 76 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 SPINK4O60575 86 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 PFDN1O60925 122 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 TCRAP04437 139 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 ZNF345Q14585 488 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 MUC21Q5SSG8 566 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 SAPCD1Q5SSQ6 148 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 Q6ZTI0 123 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 SUN5Q8TC36 379 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 EPDR1Q9UM22 224 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 KLF12Q9Y4X4 402 aa7.79□□□□□ -1.16
HLA-F-221ENST00000444621 A0A0J9YY99 117 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 M0R2N4 97 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 GNG5P63218 68 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 TMEM183BQ1AE95 376 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 PRR9Q5T870 116 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 SSX7Q7RTT5 188 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 TMEM183AQ8IXX5 376 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 KCNRGQ8N5I3 272 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 CYB561D1Q8N8Q1 229 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 C11orf72Q8NBR9 251 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 C18orf15Q96N68 181 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 SDF2L1Q9HCN8 221 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 TP53TG3Q9ULZ0 132 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 PSG8Q9UQ74 426 aa7.78□□□□□ -1.16
HLA-F-221ENST00000444621 UMAD1C9J7I0 102 aa7.77□□□□□ -1.17
HLA-F-221ENST00000444621 SMLR1H3BR10 107 aa7.77□□□□□ -1.17
HLA-F-221ENST00000444621 FLI1Q01543 452 aaPredicted RBP7.77□□□□□ -1.17
HLA-F-221ENST00000444621 SMUG1Q53HV7 270 aa7.77□□□□□ -1.17
HLA-F-221ENST00000444621 PRNTQ86SH4 94 aa7.77□□□□□ -1.17
HLA-F-221ENST00000444621 TMEM75Q8N9X5 138 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms