RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 BCL6BQ8N143 479 aaPredicted RBP7□□□□□ -1.29
HDAC6-209ENST00000440653 NPFFR1Q9GZQ6 430 aa7□□□□□ -1.29
HDAC6-209ENST00000440653 LINC00587B1AMM8 73 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 K7EMT4 169 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 SCGB1D1O95968 90 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 GPX1P07203 203 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 FRMD6-AS1P0C7T7 363 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 CTAG1AP78358 180 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 KIAA1644Q3SXP7 199 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 GDF5OSQ5U4N7 250 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 TEX43Q6ZNM6 134 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 C9orf47Q6ZRZ4 202 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 C8orf49Q96NF6 230 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 RCHY1Q96PM5 261 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 CNFNQ9BYD5 112 aa6.99□□□□□ -1.29
HDAC6-209ENST00000440653 DAZ1Q9NQZ3 744 aaKnown RBP6.99□□□□□ -1.29
HDAC6-209ENST00000440653 IGHV3-35A0A0C4DH35 117 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 FABP5P3A8MUU1 101 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 OVOL1O14753 267 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 TGFAP01135 160 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 ARMS2P0C7Q2 107 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 DDTP30046 118 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 ZNF138P52744 262 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 DEFB112Q30KQ8 113 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 CDPF1Q6NVV7 123 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 RNASEKQ6P5S7 137 aaKnown RBP6.98□□□□□ -1.29
HDAC6-209ENST00000440653 Q6ZWC4 215 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 MRPL52Q86TS9 123 aaKnown RBP6.98□□□□□ -1.29
HDAC6-209ENST00000440653 FER1L6-AS1Q8NA97 138 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 OR4X2Q8NGF9 303 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 C16orf92Q96LL3 132 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 ZNF747Q9BV97 191 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 SSBP4Q9BWG4 385 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-209ENST00000440653 NRN1Q9NPD7 142 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 UFC1Q9Y3C8 167 aa6.98□□□□□ -1.29
HDAC6-209ENST00000440653 IGHV7-4-1A0A0J9YVY3 117 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 F2Z2F3 143 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 AVPP01185 164 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 ELANEP08246 267 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 OR5AL1P0C617 328 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 IGLC6P0CF74 106 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 PSMB8P28062 276 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 CRIP1P50238 77 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 FOXE3Q13461 319 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 FAM106AQ4KMX7 169 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 SHISA2Q6UWI4 295 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 TMEM86BQ8N661 226 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 Q8TAT8 98 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 VGLL1Q99990 258 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 PEF1Q9UBV8 284 aaKnown RBP6.97□□□□□ -1.29
HDAC6-209ENST00000440653 LAMTOR2Q9Y2Q5 125 aa6.97□□□□□ -1.29
HDAC6-209ENST00000440653 IGHV3OR16-8A0A075B7F1 116 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 TRAV8-2A0A0B4J237 113 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 C20orf202A1L168 122 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 ZNF705FA8MVS1 300 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-209ENST00000440653 M0R2Z0 102 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 SOCS3O14543 225 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 NUPR1O60356 82 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 IGHV4-59P01825 116 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 ZNF705DP0CH99 300 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-209ENST00000440653 ZNF705BP0CI00 300 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-209ENST00000440653 PMCHL1Q16048 86 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 LBHQ53QV2 105 aaPredicted RBP6.96□□□□□ -1.3
HDAC6-209ENST00000440653 Q6YL49 198 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 REC114Q7Z4M0 266 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 GPHB5Q86YW7 130 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 ZNF738Q8NE65 137 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 OR10J6PQ8NGY7 276 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 MYOZ3Q8TDC0 251 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 LINC00477Q96M19 166 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 C20orf144Q9BQM9 153 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 VAMP8Q9BV40 100 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 LINC00527Q9UJ94 153 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 PCLOQ9Y6V0 5065 aa6.96□□□□□ -1.3
HDAC6-209ENST00000440653 FAM181BA6NEQ2 426 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 PPBPP02775 128 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 LGALS1P09382 135 aaKnown RBP6.95□□□□□ -1.3
HDAC6-209ENST00000440653 MED14OSP0DP75 135 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 NTF3P20783 257 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 ID1P41134 155 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 KRTDAPP60985 99 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 BLCAPP62952 87 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 LYZL1Q6UWQ5 148 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 NIT1Q86X76 327 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 ORMDL3Q8N138 153 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 RNF182Q8N6D2 247 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 RNF152Q8N8N0 203 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 NDUFAF3Q9BU61 184 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 TMEM191AQ9H0A3 160 aa6.95□□□□□ -1.3
HDAC6-209ENST00000440653 IGHV3-66A0A0C4DH42 116 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 LGALS9O00182 355 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 ZNF207O43670 478 aaKnown RBP6.94□□□□□ -1.3
HDAC6-209ENST00000440653 TRBV12-3P01733 135 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 IGHV3-11P01762 117 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 HLA-DMBP28068 263 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 CACNG7P62955 275 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 FAM104BQ5XKR9 115 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 UNQ9165/PRO28630Q6UXU0 137 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 SMIM15Q7Z3B0 74 aa6.94□□□□□ -1.3
HDAC6-209ENST00000440653 ZNF664Q8N3J9 261 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms