RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ZNF680Q8NEM1 530 aa16.66■□□□□ 0.26
VARS-217ENST00000440048 ARPC5LQ9BPX5 153 aa16.66■□□□□ 0.26
VARS-217ENST00000440048 GSN-AS1Q9NRJ2 163 aa16.66■□□□□ 0.26
VARS-217ENST00000440048 CTXND1A0A1B0GTU2 59 aa16.65■□□□□ 0.26
VARS-217ENST00000440048 F5H768 121 aa16.65■□□□□ 0.26
VARS-217ENST00000440048 P0DMU3 169 aa16.65■□□□□ 0.26
VARS-217ENST00000440048 FAM231AP0DMU4 169 aa16.65■□□□□ 0.26
VARS-217ENST00000440048 FAM231CP0DMU5 169 aa16.65■□□□□ 0.26
VARS-217ENST00000440048 DAZ2Q13117 558 aaKnown RBP16.65■□□□□ 0.26
VARS-217ENST00000440048 IGHV1OR15-1A0A075B7D0 117 aa16.64■□□□□ 0.25
VARS-217ENST00000440048 GAGE12BA1L429 117 aa16.64■□□□□ 0.25
VARS-217ENST00000440048 GAGE7O76087 117 aa16.64■□□□□ 0.25
VARS-217ENST00000440048 GAGE12FP0CL80 117 aa16.64■□□□□ 0.25
VARS-217ENST00000440048 GAGE12GP0CL81 117 aa16.64■□□□□ 0.25
VARS-217ENST00000440048 GAGE12IP0CL82 117 aa16.64■□□□□ 0.25
VARS-217ENST00000440048 IQCF2Q8IXL9 164 aa16.64■□□□□ 0.25
VARS-217ENST00000440048 TP53TG3Q9ULZ0 132 aa16.64■□□□□ 0.25
VARS-217ENST00000440048 TRAV8-1A0A0A6YYK1 113 aa16.63■□□□□ 0.25
VARS-217ENST00000440048 C5orf17Q8NAS9 161 aa16.63■□□□□ 0.25
VARS-217ENST00000440048 GGTLC3B5MD39 225 aa16.62■□□□□ 0.25
VARS-217ENST00000440048 SUMO1P63165 101 aaKnown RBP16.62■□□□□ 0.25
VARS-217ENST00000440048 Q6AWC8 147 aa16.62■□□□□ 0.25
VARS-217ENST00000440048 Q6ZTI0 123 aa16.62■□□□□ 0.25
VARS-217ENST00000440048 TVP23CQ96ET8 276 aa16.62■□□□□ 0.25
VARS-217ENST00000440048 A0A0D9SG52 128 aa16.61■□□□□ 0.25
VARS-217ENST00000440048 SERTM2A0A1B0GWG4 89 aa16.61■□□□□ 0.25
VARS-217ENST00000440048 TCRAP04437 139 aa16.61■□□□□ 0.25
VARS-217ENST00000440048 TCL1AP56279 114 aa16.61■□□□□ 0.25
VARS-217ENST00000440048 MUC21Q5SSG8 566 aa16.61■□□□□ 0.25
VARS-217ENST00000440048 IBA57Q5T440 356 aaKnown RBP16.61■□□□□ 0.25
VARS-217ENST00000440048 POM121L12Q8N7R1 296 aa16.61■□□□□ 0.25
VARS-217ENST00000440048 C15orf53Q8NAA6 179 aa16.61■□□□□ 0.25
VARS-217ENST00000440048 TMPRSS5Q9H3S3 457 aa16.61■□□□□ 0.25
VARS-217ENST00000440048 KLF12Q9Y4X4 402 aa16.61■□□□□ 0.25
VARS-217ENST00000440048 FGF8P55075 233 aaPredicted RBP16.6■□□□□ 0.25
VARS-217ENST00000440048 SGK494Q96LW2 274 aa16.6■□□□□ 0.25
VARS-217ENST00000440048 BIRC6Q9NR09 4857 aa16.6■□□□□ 0.25
VARS-217ENST00000440048 A0A1W2PRE2 83 aa16.59■□□□□ 0.25
VARS-217ENST00000440048 BCL2L11O43521 198 aa16.59■□□□□ 0.25
VARS-217ENST00000440048 TREM1Q9NP99 234 aa16.59■□□□□ 0.25
VARS-217ENST00000440048 EPDR1Q9UM22 224 aa16.59■□□□□ 0.25
VARS-217ENST00000440048 FRAS1Q86XX4 4008 aa16.58■□□□□ 0.25
VARS-217ENST00000440048 TRGV1A0A0A0MS02 117 aa16.58■□□□□ 0.24
VARS-217ENST00000440048 KANTRA0A1W2PQU2 76 aa16.58■□□□□ 0.24
VARS-217ENST00000440048 F6UZH7 168 aa16.58■□□□□ 0.24
VARS-217ENST00000440048 DNAH10Q8IVF4 4471 aa16.58■□□□□ 0.24
VARS-217ENST00000440048 MAP1LC3B2A6NCE7 125 aa16.57■□□□□ 0.24
VARS-217ENST00000440048 K7EQM0 130 aa16.57■□□□□ 0.24
VARS-217ENST00000440048 SPINK4O60575 86 aa16.57■□□□□ 0.24
VARS-217ENST00000440048 UBE2G2P60604 165 aa16.57■□□□□ 0.24
VARS-217ENST00000440048 ZNF471Q9BX82 626 aaPredicted RBP16.57■□□□□ 0.24
VARS-217ENST00000440048 MAP1LC3BQ9GZQ8 125 aa16.57■□□□□ 0.24
VARS-217ENST00000440048 SEC11BP0C7V7 166 aa16.56■□□□□ 0.24
VARS-217ENST00000440048 HOXA5P20719 270 aa16.56■□□□□ 0.24
VARS-217ENST00000440048 ZNF415Q09FC8 603 aa16.56■□□□□ 0.24
VARS-217ENST00000440048 OR5I1Q13606 314 aa16.56■□□□□ 0.24
VARS-217ENST00000440048 FAM159AQ6UWV7 190 aa16.56■□□□□ 0.24
VARS-217ENST00000440048 Q6ZNX1 250 aa16.56■□□□□ 0.24
VARS-217ENST00000440048 UBE2DNLQ8IWF7 75 aa16.56■□□□□ 0.24
VARS-217ENST00000440048 CYB561D1Q8N8Q1 229 aa16.56■□□□□ 0.24
VARS-217ENST00000440048 PSG8Q9UQ74 426 aa16.56■□□□□ 0.24
VARS-217ENST00000440048 MUC4Q99102 2169 aa16.55■□□□□ 0.24
VARS-217ENST00000440048 TRGV2A0A075B6R0 118 aa16.55■□□□□ 0.24
VARS-217ENST00000440048 NUDT3O95989 172 aa16.55■□□□□ 0.24
VARS-217ENST00000440048 IGLV2-11P01706 119 aa16.55■□□□□ 0.24
VARS-217ENST00000440048 FHITP49789 147 aa16.55■□□□□ 0.24
VARS-217ENST00000440048 TMUB2Q71RG4 321 aa16.55■□□□□ 0.24
VARS-217ENST00000440048 C18orf15Q96N68 181 aa16.55■□□□□ 0.24
VARS-217ENST00000440048 ATG101Q9BSB4 218 aa16.55■□□□□ 0.24
VARS-217ENST00000440048 NDFIP1Q9BT67 221 aa16.55■□□□□ 0.24
VARS-217ENST00000440048 NAGKQ9UJ70 344 aa16.55■□□□□ 0.24
VARS-217ENST00000440048 NACAE9PAV3 2078 aa16.55■□□□□ 0.24
VARS-217ENST00000440048 TRAV21A0A0B4J279 112 aa16.54■□□□□ 0.24
VARS-217ENST00000440048 FAM74A7A6NL05 159 aa16.54■□□□□ 0.24
VARS-217ENST00000440048 TMEM183BQ1AE95 376 aa16.54■□□□□ 0.24
VARS-217ENST00000440048 RNF212Q495C1 297 aa16.54■□□□□ 0.24
VARS-217ENST00000440048 TMEM183AQ8IXX5 376 aa16.54■□□□□ 0.24
VARS-217ENST00000440048 MRPL16Q9NX20 251 aaKnown RBP16.54■□□□□ 0.24
VARS-217ENST00000440048 MDFICQ9P1T7 246 aa16.54■□□□□ 0.24
VARS-217ENST00000440048 TRAV26-1A0A087WT03 109 aa16.53■□□□□ 0.24
VARS-217ENST00000440048 PFDN1O60925 122 aa16.53■□□□□ 0.24
VARS-217ENST00000440048 FLI1Q01543 452 aaPredicted RBP16.53■□□□□ 0.24
VARS-217ENST00000440048 LGALS9BQ3B8N2 356 aa16.53■□□□□ 0.24
VARS-217ENST00000440048 TDRG1Q3Y452 100 aa16.53■□□□□ 0.24
VARS-217ENST00000440048 TMEM75Q8N9X5 138 aa16.53■□□□□ 0.24
VARS-217ENST00000440048 C8orf49Q96NF6 230 aa16.53■□□□□ 0.24
VARS-217ENST00000440048 TRGV11A0A075B6L2 103 aa16.52■□□□□ 0.24
VARS-217ENST00000440048 UMAD1C9J7I0 102 aa16.52■□□□□ 0.24
VARS-217ENST00000440048 IFNA7P01567 189 aa16.52■□□□□ 0.24
VARS-217ENST00000440048 PRNTQ86SH4 94 aa16.52■□□□□ 0.24
VARS-217ENST00000440048 TCTE3Q8IZS6 198 aa16.52■□□□□ 0.24
VARS-217ENST00000440048 STOML3Q8TAV4 291 aa16.52■□□□□ 0.24
VARS-217ENST00000440048 NKX6-2Q9C056 277 aaPredicted RBP16.52■□□□□ 0.24
VARS-217ENST00000440048 FBLL1A6NHQ2 334 aaKnown RBP16.51■□□□□ 0.23
VARS-217ENST00000440048 ZNF80P51504 273 aaPredicted RBP16.51■□□□□ 0.23
VARS-217ENST00000440048 EIF5AP63241 154 aaKnown RBP16.51■□□□□ 0.23
VARS-217ENST00000440048 FAM213BQ8TBF2 198 aa16.51■□□□□ 0.23
VARS-217ENST00000440048 LINC00479Q96M42 142 aa16.51■□□□□ 0.23
VARS-217ENST00000440048 TRAV34A0A0B4J273 112 aa16.5■□□□□ 0.23
VARS-217ENST00000440048 A0A0J9YY99 117 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms