RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 FAM74A7A6NL05 159 aa8.44□□□□□ -1.06
HSPG2-206ENST00000439717 H2AFB1P0C5Y9 115 aa8.44□□□□□ -1.06
HSPG2-206ENST00000439717 PRR9Q5T870 116 aa8.44□□□□□ -1.06
HSPG2-206ENST00000439717 CYB561D1Q8N8Q1 229 aa8.44□□□□□ -1.06
HSPG2-206ENST00000439717 SFT2D1Q8WV19 159 aa8.44□□□□□ -1.06
HSPG2-206ENST00000439717 ATG101Q9BSB4 218 aa8.44□□□□□ -1.06
HSPG2-206ENST00000439717 LYSTQ99698 3801 aa8.44□□□□□ -1.06
HSPG2-206ENST00000439717 TRAV8-1A0A0A6YYK1 113 aa8.43□□□□□ -1.06
HSPG2-206ENST00000439717 PPT1P50897 306 aa8.43□□□□□ -1.06
HSPG2-206ENST00000439717 TCTAP57738 103 aa8.43□□□□□ -1.06
HSPG2-206ENST00000439717 UBE2G2P60604 165 aa8.43□□□□□ -1.06
HSPG2-206ENST00000439717 EIF4E3Q8N5X7 224 aaKnown RBP8.43□□□□□ -1.06
HSPG2-206ENST00000439717 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
HSPG2-206ENST00000439717 ZNF680Q8NEM1 530 aa8.43□□□□□ -1.06
HSPG2-206ENST00000439717 C2CD4CQ8TF44 421 aa8.43□□□□□ -1.06
HSPG2-206ENST00000439717 TCEAL7Q9BRU2 100 aa8.43□□□□□ -1.06
HSPG2-206ENST00000439717 NDFIP1Q9BT67 221 aa8.43□□□□□ -1.06
HSPG2-206ENST00000439717 TIMM8BQ9Y5J9 83 aaPredicted RBP8.43□□□□□ -1.06
HSPG2-206ENST00000439717 RGS13O14921 159 aa8.42□□□□□ -1.06
HSPG2-206ENST00000439717 IFNA7P01567 189 aa8.42□□□□□ -1.06
HSPG2-206ENST00000439717 SULT1A2P50226 295 aa8.42□□□□□ -1.06
HSPG2-206ENST00000439717 DAD1P61803 113 aa8.42□□□□□ -1.06
HSPG2-206ENST00000439717 ANXA2RQ3ZCQ2 193 aa8.42□□□□□ -1.06
HSPG2-206ENST00000439717 Q6AWC8 147 aa8.42□□□□□ -1.06
HSPG2-206ENST00000439717 ZNF767PQ75MW2 155 aa8.42□□□□□ -1.06
HSPG2-206ENST00000439717 HIST1H2BAQ96A08 127 aa8.42□□□□□ -1.06
HSPG2-206ENST00000439717 TREM1Q9NP99 234 aa8.42□□□□□ -1.06
HSPG2-206ENST00000439717 PSG8Q9UQ74 426 aa8.42□□□□□ -1.06
HSPG2-206ENST00000439717 IGHV1OR15-1A0A075B7D0 117 aa8.41□□□□□ -1.06
HSPG2-206ENST00000439717 DEFB131BA0A096LNP1 70 aa8.41□□□□□ -1.06
HSPG2-206ENST00000439717 TRAV1-1A0A0B4J248 108 aa8.41□□□□□ -1.06
HSPG2-206ENST00000439717 CBY3A6NI87 242 aa8.41□□□□□ -1.06
HSPG2-206ENST00000439717 SNURFLB1AK76 121 aa8.41□□□□□ -1.06
HSPG2-206ENST00000439717 F6UZH7 168 aa8.41□□□□□ -1.06
HSPG2-206ENST00000439717 TEX46H3BTG2 121 aa8.41□□□□□ -1.06
HSPG2-206ENST00000439717 PEX7O00628 323 aa8.41□□□□□ -1.06
HSPG2-206ENST00000439717 IGLV2-11P01706 119 aa8.41□□□□□ -1.06
HSPG2-206ENST00000439717 FLI1Q01543 452 aaPredicted RBP8.41□□□□□ -1.06
HSPG2-206ENST00000439717 SAPCD1Q5SSQ6 148 aa8.41□□□□□ -1.06
HSPG2-206ENST00000439717 TVP23CQ96ET8 276 aa8.41□□□□□ -1.06
HSPG2-206ENST00000439717 TENM2Q9NT68 2774 aa8.41□□□□□ -1.06
HSPG2-206ENST00000439717 TRAV21A0A0B4J279 112 aa8.4□□□□□ -1.06
HSPG2-206ENST00000439717 LCE6AA0A183 80 aa8.4□□□□□ -1.06
HSPG2-206ENST00000439717 PAGE4O60829 102 aa8.4□□□□□ -1.06
HSPG2-206ENST00000439717 DAZ2Q13117 558 aaKnown RBP8.4□□□□□ -1.06
HSPG2-206ENST00000439717 IBA57Q5T440 356 aaKnown RBP8.4□□□□□ -1.06
HSPG2-206ENST00000439717 CST9LP1Q5W188 147 aa8.4□□□□□ -1.06
HSPG2-206ENST00000439717 SGK494Q96LW2 274 aa8.4□□□□□ -1.06
HSPG2-206ENST00000439717 NOP10Q9NPE3 64 aaKnown RBP8.4□□□□□ -1.06
HSPG2-206ENST00000439717 KMT2CQ8NEZ4 4911 aaKnown RBP8.39□□□□□ -1.07
HSPG2-206ENST00000439717 A0A1B0GV50 99 aa8.39□□□□□ -1.07
HSPG2-206ENST00000439717 IGLL5B9A064 214 aa8.39□□□□□ -1.07
HSPG2-206ENST00000439717 DEFB130BP0DP73 79 aa8.39□□□□□ -1.07
HSPG2-206ENST00000439717 DEFB130AP0DP74 79 aa8.39□□□□□ -1.07
HSPG2-206ENST00000439717 FAM159AQ6UWV7 190 aa8.39□□□□□ -1.07
HSPG2-206ENST00000439717 Q6ZQT7 251 aa8.39□□□□□ -1.07
HSPG2-206ENST00000439717 PRNTQ86SH4 94 aa8.39□□□□□ -1.07
HSPG2-206ENST00000439717 C11orf72Q8NBR9 251 aa8.39□□□□□ -1.07
HSPG2-206ENST00000439717 FAM210BQ96KR6 192 aa8.39□□□□□ -1.07
HSPG2-206ENST00000439717 MANBALQ9NQG1 85 aa8.39□□□□□ -1.07
HSPG2-206ENST00000439717 ATP5G3P48201 142 aa8.38□□□□□ -1.07
HSPG2-206ENST00000439717 TCL1AP56279 114 aa8.38□□□□□ -1.07
HSPG2-206ENST00000439717 TDRG1Q3Y452 100 aa8.38□□□□□ -1.07
HSPG2-206ENST00000439717 SMUG1Q53HV7 270 aa8.38□□□□□ -1.07
HSPG2-206ENST00000439717 LINC00612Q8N6U2 182 aa8.38□□□□□ -1.07
HSPG2-206ENST00000439717 FMC1Q96HJ9 113 aa8.38□□□□□ -1.07
HSPG2-206ENST00000439717 LINC00479Q96M42 142 aa8.38□□□□□ -1.07
HSPG2-206ENST00000439717 GSN-AS1Q9NRJ2 163 aa8.38□□□□□ -1.07
HSPG2-206ENST00000439717 KLF12Q9Y4X4 402 aa8.38□□□□□ -1.07
HSPG2-206ENST00000439717 TRGV11A0A075B6L2 103 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 IGHV4-4A0A075B6R2 117 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 TRAV34A0A0B4J273 112 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 TRBV6-1A0A0K0K1D8 114 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 GCGP01275 180 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 S100A9P06702 114 aaKnown RBP8.37□□□□□ -1.07
HSPG2-206ENST00000439717 ZNF415Q09FC8 603 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 PLECQ15149 4684 aaKnown RBP8.37□□□□□ -1.07
HSPG2-206ENST00000439717 MUC21Q5SSG8 566 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 KCNS1Q96KK3 526 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 C8orf49Q96NF6 230 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 TXNDC17Q9BRA2 123 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 TP53TG3Q9ULZ0 132 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 APLNQ9ULZ1 77 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 ZFP30Q9Y2G7 519 aa8.37□□□□□ -1.07
HSPG2-206ENST00000439717 ALMS1Q8TCU4 4167 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 SPINK4O60575 86 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 ATP5G1P05496 136 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 PFN1P07737 140 aaKnown RBP8.36□□□□□ -1.07
HSPG2-206ENST00000439717 HTN3P15516 51 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 NKX2-5P52952 324 aaPredicted RBP8.36□□□□□ -1.07
HSPG2-206ENST00000439717 UBE2G1P62253 170 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 CCL20P78556 96 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 TMEM183BQ1AE95 376 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 LGALS9BQ3B8N2 356 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 COX8CQ7Z4L0 72 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 Q86TA4 180 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 LINC00476Q8WZB0 136 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 C18orf15Q96N68 181 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 NDUFAF3Q9BU61 184 aa8.36□□□□□ -1.07
HSPG2-206ENST00000439717 SDF2L1Q9HCN8 221 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms