RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 LENEPQ9Y5L5 61 aa16.91■□□□□ 0.3
CPNE1-217ENST00000439669 AKR1C8PQ5T2L2 129 aa16.9■□□□□ 0.3
CPNE1-217ENST00000439669 ARL6IP6Q8N6S5 226 aa16.9■□□□□ 0.3
CPNE1-217ENST00000439669 TMED6Q8WW62 240 aa16.9■□□□□ 0.3
CPNE1-217ENST00000439669 ST6GAL2Q96JF0 529 aa16.9■□□□□ 0.3
CPNE1-217ENST00000439669 TMEM167BQ9NRX6 74 aa16.9■□□□□ 0.3
CPNE1-217ENST00000439669 Q6ZTI0 123 aa16.89■□□□□ 0.29
CPNE1-217ENST00000439669 SSX7Q7RTT5 188 aa16.89■□□□□ 0.29
CPNE1-217ENST00000439669 TP53TG3Q9ULZ0 132 aa16.89■□□□□ 0.29
CPNE1-217ENST00000439669 MUC21Q5SSG8 566 aa16.88■□□□□ 0.29
CPNE1-217ENST00000439669 C5orf17Q8NAS9 161 aa16.88■□□□□ 0.29
CPNE1-217ENST00000439669 SUN5Q8TC36 379 aa16.88■□□□□ 0.29
CPNE1-217ENST00000439669 TRGV1A0A0A0MS02 117 aa16.87■□□□□ 0.29
CPNE1-217ENST00000439669 TRAV8-1A0A0A6YYK1 113 aa16.87■□□□□ 0.29
CPNE1-217ENST00000439669 CTXND1A0A1B0GTU2 59 aa16.87■□□□□ 0.29
CPNE1-217ENST00000439669 NUDT3O95989 172 aa16.87■□□□□ 0.29
CPNE1-217ENST00000439669 TCL1AP56279 114 aa16.87■□□□□ 0.29
CPNE1-217ENST00000439669 OR5I1Q13606 314 aa16.87■□□□□ 0.29
CPNE1-217ENST00000439669 IBA57Q5T440 356 aaKnown RBP16.87■□□□□ 0.29
CPNE1-217ENST00000439669 CYTL1Q9NRR1 136 aa16.87■□□□□ 0.29
CPNE1-217ENST00000439669 KLF12Q9Y4X4 402 aa16.87■□□□□ 0.29
CPNE1-217ENST00000439669 TRGV2A0A075B6R0 118 aa16.86■□□□□ 0.29
CPNE1-217ENST00000439669 ZNF726P1Q15940 193 aa16.86■□□□□ 0.29
CPNE1-217ENST00000439669 TMPRSS5Q9H3S3 457 aa16.86■□□□□ 0.29
CPNE1-217ENST00000439669 VPS13DQ5THJ4 4388 aa16.86■□□□□ 0.29
CPNE1-217ENST00000439669 KMT2AQ03164 3969 aa16.86■□□□□ 0.29
CPNE1-217ENST00000439669 SERTM2A0A1B0GWG4 89 aa16.85■□□□□ 0.29
CPNE1-217ENST00000439669 ZNF415Q09FC8 603 aa16.85■□□□□ 0.29
CPNE1-217ENST00000439669 ZNF345Q14585 488 aa16.85■□□□□ 0.29
CPNE1-217ENST00000439669 Q6AWC8 147 aa16.85■□□□□ 0.29
CPNE1-217ENST00000439669 SGK494Q96LW2 274 aa16.85■□□□□ 0.29
CPNE1-217ENST00000439669 TREM1Q9NP99 234 aa16.85■□□□□ 0.29
CPNE1-217ENST00000439669 NAGKQ9UJ70 344 aa16.85■□□□□ 0.29
CPNE1-217ENST00000439669 GGTLC3B5MD39 225 aa16.84■□□□□ 0.29
CPNE1-217ENST00000439669 F6UZH7 168 aa16.84■□□□□ 0.29
CPNE1-217ENST00000439669 K7EQM0 130 aa16.84■□□□□ 0.29
CPNE1-217ENST00000439669 TCRAP04437 139 aa16.84■□□□□ 0.29
CPNE1-217ENST00000439669 SUMO1P63165 101 aaKnown RBP16.84■□□□□ 0.29
CPNE1-217ENST00000439669 KCNRGQ8N5I3 272 aa16.84■□□□□ 0.29
CPNE1-217ENST00000439669 ATG101Q9BSB4 218 aa16.84■□□□□ 0.29
CPNE1-217ENST00000439669 NDFIP1Q9BT67 221 aa16.84■□□□□ 0.29
CPNE1-217ENST00000439669 HOXA5P20719 270 aa16.83■□□□□ 0.28
CPNE1-217ENST00000439669 RNF212Q495C1 297 aa16.83■□□□□ 0.28
CPNE1-217ENST00000439669 FAM159AQ6UWV7 190 aa16.83■□□□□ 0.28
CPNE1-217ENST00000439669 OR11H4Q8NGC9 324 aa16.83■□□□□ 0.28
CPNE1-217ENST00000439669 TRAV26-1A0A087WT03 109 aa16.82■□□□□ 0.28
CPNE1-217ENST00000439669 SPINK4O60575 86 aa16.82■□□□□ 0.28
CPNE1-217ENST00000439669 FGF8P55075 233 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-217ENST00000439669 TVP23CQ96ET8 276 aa16.82■□□□□ 0.28
CPNE1-217ENST00000439669 MRPL16Q9NX20 251 aaKnown RBP16.82■□□□□ 0.28
CPNE1-217ENST00000439669 A0A0J9YY99 117 aa16.81■□□□□ 0.28
CPNE1-217ENST00000439669 HMSDA8MTL9 139 aa16.81■□□□□ 0.28
CPNE1-217ENST00000439669 M0R2N4 97 aa16.81■□□□□ 0.28
CPNE1-217ENST00000439669 UBE2G2P60604 165 aa16.81■□□□□ 0.28
CPNE1-217ENST00000439669 TMEM183BQ1AE95 376 aa16.81■□□□□ 0.28
CPNE1-217ENST00000439669 TMEM183AQ8IXX5 376 aa16.81■□□□□ 0.28
CPNE1-217ENST00000439669 EPDR1Q9UM22 224 aa16.81■□□□□ 0.28
CPNE1-217ENST00000439669 IGLV2-18A0A075B6J9 118 aa16.8■□□□□ 0.28
CPNE1-217ENST00000439669 TRGV11A0A075B6L2 103 aa16.8■□□□□ 0.28
CPNE1-217ENST00000439669 TRAV21A0A0B4J279 112 aa16.8■□□□□ 0.28
CPNE1-217ENST00000439669 A0A1W2PRE2 83 aa16.8■□□□□ 0.28
CPNE1-217ENST00000439669 MAP1LC3B2A6NCE7 125 aa16.8■□□□□ 0.28
CPNE1-217ENST00000439669 CYB561D1Q8N8Q1 229 aa16.8■□□□□ 0.28
CPNE1-217ENST00000439669 MAP1LC3BQ9GZQ8 125 aa16.8■□□□□ 0.28
CPNE1-217ENST00000439669 EPPK1P58107 5090 aaKnown RBP16.79■□□□□ 0.28
CPNE1-217ENST00000439669 A0A0D9SG52 128 aa16.79■□□□□ 0.28
CPNE1-217ENST00000439669 KANTRA0A1W2PQU2 76 aa16.79■□□□□ 0.28
CPNE1-217ENST00000439669 C18orf15Q96N68 181 aa16.79■□□□□ 0.28
CPNE1-217ENST00000439669 ZNF471Q9BX82 626 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-217ENST00000439669 MDFICQ9P1T7 246 aa16.79■□□□□ 0.28
CPNE1-217ENST00000439669 PSG8Q9UQ74 426 aa16.79■□□□□ 0.28
CPNE1-217ENST00000439669 BCL2L11O43521 198 aa16.78■□□□□ 0.28
CPNE1-217ENST00000439669 IFNA7P01567 189 aa16.78■□□□□ 0.28
CPNE1-217ENST00000439669 LGALS9BQ3B8N2 356 aa16.78■□□□□ 0.28
CPNE1-217ENST00000439669 PRNTQ86SH4 94 aa16.78■□□□□ 0.28
CPNE1-217ENST00000439669 IGHV3-53P01767 116 aa16.77■□□□□ 0.28
CPNE1-217ENST00000439669 CCL18P55774 89 aa16.77■□□□□ 0.28
CPNE1-217ENST00000439669 FLI1Q01543 452 aaPredicted RBP16.77■□□□□ 0.28
CPNE1-217ENST00000439669 TMEM75Q8N9X5 138 aa16.77■□□□□ 0.28
CPNE1-217ENST00000439669 C8orf49Q96NF6 230 aa16.77■□□□□ 0.28
CPNE1-217ENST00000439669 DNAH6Q9C0G6 4158 aa16.76■□□□□ 0.27
CPNE1-217ENST00000439669 FAM3BP58499 235 aaPredicted RBP16.76■□□□□ 0.27
CPNE1-217ENST00000439669 STOML3Q8TAV4 291 aa16.76■□□□□ 0.27
CPNE1-217ENST00000439669 IGLV2-11P01706 119 aa16.75■□□□□ 0.27
CPNE1-217ENST00000439669 TDRG1Q3Y452 100 aa16.75■□□□□ 0.27
CPNE1-217ENST00000439669 ZFP69Q49AA0 526 aa16.75■□□□□ 0.27
CPNE1-217ENST00000439669 SDF2L1Q9HCN8 221 aa16.75■□□□□ 0.27
CPNE1-217ENST00000439669 NACAE9PAV3 2078 aa16.74■□□□□ 0.27
CPNE1-217ENST00000439669 FBLL1A6NHQ2 334 aaKnown RBP16.74■□□□□ 0.27
CPNE1-217ENST00000439669 FAM74A7A6NL05 159 aa16.74■□□□□ 0.27
CPNE1-217ENST00000439669 GNRH2O43555 120 aa16.74■□□□□ 0.27
CPNE1-217ENST00000439669 PFDN1O60925 122 aa16.74■□□□□ 0.27
CPNE1-217ENST00000439669 SEC11BP0C7V7 166 aa16.74■□□□□ 0.27
CPNE1-217ENST00000439669 FHITP49789 147 aa16.74■□□□□ 0.27
CPNE1-217ENST00000439669 SPXQ9BT56 116 aa16.74■□□□□ 0.27
CPNE1-217ENST00000439669 TRAV34A0A0B4J273 112 aa16.73■□□□□ 0.27
CPNE1-217ENST00000439669 H3BNG1 76 aa16.73■□□□□ 0.27
CPNE1-217ENST00000439669 PEX7O00628 323 aa16.73■□□□□ 0.27
CPNE1-217ENST00000439669 GCGP01275 180 aa16.73■□□□□ 0.27
CPNE1-217ENST00000439669 PPT1P50897 306 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms