RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 DGAT2L7PQ6IED9 249 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 C9orf139Q6ZV77 190 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 C18orf32Q8TCD1 76 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 C11orf52Q96A22 123 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 GAGE12BA1L429 117 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 TEX22C9J3V5 150 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 IGHV4-59P01825 116 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 C11orf71Q6IPW1 123 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 Q86TA4 180 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 GTSCR1Q86UQ5 136 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 SYT8Q8NBV8 401 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 C20orf144Q9BQM9 153 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 PRRC2AP48634 2157 aaKnown RBP9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 I3L2K1 104 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 LEPP41159 167 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 PSMG4Q5JS54 123 aa9.1□□□□□ -0.95
TRAPPC9-202ENST00000438773 RPL13AP40429 203 aaKnown RBP9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 OR10J3Q5JRS4 329 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 C1orf159Q96HA4 380 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 DAZ1Q9NQZ3 744 aaKnown RBP9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 TET2Q6N021 2002 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 A0A1B0GW15 77 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 D6R8Y8 96 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 H3BRN7 92 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 PATE2Q6UY27 113 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 ORMDL3Q8N138 153 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 OR11H12B2RN74 326 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 OVOL1O14753 267 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 FSTL3O95633 263 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 SYNJ2BPP57105 145 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 TMEM170BQ5T4T1 132 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 OR11H1Q8NG94 326 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 MRPL16Q9NX20 251 aaKnown RBP9.09□□□□□ -0.95
TRAPPC9-202ENST00000438773 TRAV21A0A0B4J279 112 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 INS-IGF2F8WCM5 200 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 SYS1-DBNDD2H3BUS1 97 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 BLCAPP62952 87 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 RNF182Q8N6D2 247 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 TMEM190Q8WZ59 177 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 TP73-AS1Q9UF72 201 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 COX11Q9Y6N1 276 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 LAMA5O15230 3695 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 IL17RELQ6ZVW7 336 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 C17orf77Q96MU5 243 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 MGAQ8IWI9 3026 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 IGLV11-55A0A075B6I3 123 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 ATP5L2Q7Z4Y8 100 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 AMN1Q8IY45 258 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 TMEM14CQ9P0S9 112 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 V9GYV3 84 aa9.08□□□□□ -0.96
TRAPPC9-202ENST00000438773 CRXO43186 299 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC9-202ENST00000438773 ERCC8Q13216 396 aa9.07□□□□□ -0.96
TRAPPC9-202ENST00000438773 Q8N976 141 aa9.07□□□□□ -0.96
TRAPPC9-202ENST00000438773 ORAOV1Q8WV07 137 aa9.07□□□□□ -0.96
TRAPPC9-202ENST00000438773 FCN3O75636 299 aa9.07□□□□□ -0.96
TRAPPC9-202ENST00000438773 CD7P09564 240 aa9.07□□□□□ -0.96
TRAPPC9-202ENST00000438773 ARMS2P0C7Q2 107 aa9.07□□□□□ -0.96
TRAPPC9-202ENST00000438773 EMP1P54849 157 aa9.07□□□□□ -0.96
TRAPPC9-202ENST00000438773 SH2D1AO60880 128 aa9.07□□□□□ -0.96
TRAPPC9-202ENST00000438773 ZNF56Q15929 161 aa9.07□□□□□ -0.96
TRAPPC9-202ENST00000438773 KLHL30-AS1Q8NEE0 82 aa9.07□□□□□ -0.96
TRAPPC9-202ENST00000438773 IFI27L1Q96BM0 104 aa9.07□□□□□ -0.96
TRAPPC9-202ENST00000438773 IFI27P40305 119 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC9-202ENST00000438773 LYZL1Q6UWQ5 148 aa9.06□□□□□ -0.96
TRAPPC9-202ENST00000438773 BCL6BQ8N143 479 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC9-202ENST00000438773 RNASE8Q8TDE3 154 aaKnown RBP9.06□□□□□ -0.96
TRAPPC9-202ENST00000438773 PTPRBP23467 1997 aa9.06□□□□□ -0.96
TRAPPC9-202ENST00000438773 IGHV3-64A0A075B6Q5 118 aa9.06□□□□□ -0.96
TRAPPC9-202ENST00000438773 HIST2H2BCQ6DN03 193 aa9.06□□□□□ -0.96
TRAPPC9-202ENST00000438773 LINC00173Q6ZV60 143 aa9.06□□□□□ -0.96
TRAPPC9-202ENST00000438773 DYNAPQ8N1N2 210 aa9.06□□□□□ -0.96
TRAPPC9-202ENST00000438773 TMEM95Q3KNT9 176 aa9.06□□□□□ -0.96
TRAPPC9-202ENST00000438773 PRSS46E5RG02 174 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 HOXA3O43365 443 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 HERVK_113P61574 105 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 K7EMI3 77 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 FAM167A-AS1Q96KT0 104 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 CST9LQ9H4G1 147 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 TMEM213A2RRL7 107 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 ODF3BA8MYP8 253 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 CCL25O15444 150 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 DUSP14O95147 198 aaKnown RBP9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 GAGE1Q13065 139 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 FAM231BA6NCW3 169 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 CTSGP08311 255 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 C5orf56Q8N8D9 126 aa9.05□□□□□ -0.96
TRAPPC9-202ENST00000438773 NDUFA4O00483 81 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 NSUN5P1Q3KNT7 163 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 DUX3Q96PT4 197 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 SCGB3A1Q96QR1 104 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 ST20Q9HBF5 79 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 MTORP42345 2549 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 CRYGCP07315 174 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 ESDP10768 282 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 C8orf86Q6ZUL3 223 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 LINC00477Q96M19 166 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 ZNF256Q9Y2P7 627 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 IGKV3OR2-268A0A0C4DH90 116 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms