RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 BAGE2Q86Y30 109 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 APRG1Q8IVJ8 170 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 OR10J6PQ8NGY7 276 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 OCC1Q8TAD7 63 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 Q8TAT8 98 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 MLST8Q9BVC4 326 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 GPR61Q9BZJ8 451 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 SAV1Q9H4B6 383 aaPredicted RBP5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 SDF2L1Q9HCN8 221 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 FBLL1A6NHQ2 334 aaKnown RBP5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 H3BMM0 161 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 K7EN84 100 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 APOC3P02656 99 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 CT45A10P0DMU9 189 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 ZNF138P52744 262 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 CMC4P56277 68 aaPredicted RBP5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 RPL23P62829 140 aaKnown RBP5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 KRTAP21-3Q3LHN1 58 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 ACTL10Q5JWF8 245 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 EBLN2Q6P2I7 272 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 FOXI2Q6ZQN5 318 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 LINC01551Q86U37 167 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 TMEM183AQ8IXX5 376 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 NHLRC2Q8NBF2 726 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 FAM19A4Q96LR4 140 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 LINC00477Q96M19 166 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 FAM110AQ9BQ89 295 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 NIPSNAP3BQ9BS92 247 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 ZNF492Q9P255 531 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 NAT8Q9UHE5 227 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 ZFP30Q9Y2G7 519 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 LY96Q9Y6Y9 160 aa5.19□□□□□ -1.58
LSM3P3-201ENST00000436601 TENM1Q9UKZ4 2725 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 RBMY1BA6NDE4 496 aaKnown RBP5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 RBMY1EA6NEQ0 496 aaKnown RBP5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 A8MTW9 85 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 OR11H12B2RN74 326 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 PRYO14603 147 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 DUSP14O95147 198 aaKnown RBP5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 GCGP01275 180 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 IGKV3-20P01619 116 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 RBMY1DP0C7P1 496 aaKnown RBP5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 HLA-DRB4P13762 266 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 S100A1P23297 94 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 CRIP1P50238 77 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 KRTAP10-11P60412 298 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 EGFEM1PQ0D2K5 195 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 OR5I1Q13606 314 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 SAPCD1Q5SSQ6 148 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 TMEM78Q5T7P6 136 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 AMTNQ6UX39 209 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 LINC00322Q6ZN03 302 aaPredicted RBP5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 COX8CQ7Z4L0 72 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 ZC2HC1AQ96GY0 325 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 C8orf49Q96NF6 230 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 WFDC10AQ9H1F0 79 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 HLA-DRB4X5D2U9 266 aa5.18□□□□□ -1.58
LSM3P3-201ENST00000436601 TRBV7-9A0A0J9YWB2 115 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 G3V4G9 280 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 MGST1P10620 155 aaKnown RBP5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 CRISP2P16562 243 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 ZNF80P51504 273 aaPredicted RBP5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 PNRC1Q12796 327 aaPredicted RBP5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 ADIRFQ15847 76 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 PRR9Q5T870 116 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 ATRAIDQ6UW56 229 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 TRPT1Q86TN4 253 aaKnown RBP5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 SVBPQ8N300 66 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 DEFB125Q8N687 156 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 ZFAND2AQ8N6M9 145 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 OR4B1Q8NGF8 309 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 ISOC2Q96AB3 205 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 SMIM12Q96EX1 92 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 LENEPQ9Y5L5 61 aa5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 SETD2Q9BYW2 2564 aaPredicted RBP5.17□□□□□ -1.58
LSM3P3-201ENST00000436601 ATRQ13535 2644 aa5.16□□□□□ -1.58
LSM3P3-201ENST00000436601 C7orf77A4D0Y5 90 aa5.16□□□□□ -1.58
LSM3P3-201ENST00000436601 C19orf71A6NCJ1 209 aa5.16□□□□□ -1.58
LSM3P3-201ENST00000436601 KLLNB2CW77 178 aa5.16□□□□□ -1.58
LSM3P3-201ENST00000436601 M0R036 132 aa5.16□□□□□ -1.58
LSM3P3-201ENST00000436601 Q6ZQT7 251 aa5.16□□□□□ -1.58
LSM3P3-201ENST00000436601 GTSCR1Q86UQ5 136 aa5.16□□□□□ -1.58
LSM3P3-201ENST00000436601 ODF3Q96PU9 254 aa5.16□□□□□ -1.58
LSM3P3-201ENST00000436601 NDFIP1Q9BT67 221 aa5.16□□□□□ -1.58
LSM3P3-201ENST00000436601 M0R2Z0 102 aa5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 CRXO43186 299 aaPredicted RBP5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 SNAPINO95295 136 aa5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 RNASE4P34096 147 aaKnown RBP5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 LEPP41159 167 aa5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 FXYD7P58549 80 aa5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 SPINK13Q1W4C9 94 aa5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 SMUG1Q53HV7 270 aa5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 PRR27Q6MZM9 219 aa5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 FAM231DQ6ZW35 169 aa5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 STHQ8IWL8 128 aa5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 SFRP2Q96HF1 295 aa5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 RNASE7Q9H1E1 156 aaKnown RBP5.15□□□□□ -1.59
LSM3P3-201ENST00000436601 TRAV12-2A0A075B6T6 113 aa5.14□□□□□ -1.59
LSM3P3-201ENST00000436601 FABP5P3A8MUU1 101 aa5.14□□□□□ -1.59
LSM3P3-201ENST00000436601 B4DEV8 164 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms