RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 LINC00479Q96M42 142 aa12.24□□□□□ -0.45
NEDD4-202ENST00000435532 SHISA2Q6UWI4 295 aa12.24□□□□□ -0.45
NEDD4-202ENST00000435532 TMEM131Q92545 1883 aa12.24□□□□□ -0.45
NEDD4-202ENST00000435532 SMKR1H3BMG3 65 aa12.24□□□□□ -0.45
NEDD4-202ENST00000435532 LURAP1LQ8IV03 231 aa12.24□□□□□ -0.45
NEDD4-202ENST00000435532 CTAG1AP78358 180 aa12.24□□□□□ -0.45
NEDD4-202ENST00000435532 GUSBP1Q15486 140 aa12.24□□□□□ -0.45
NEDD4-202ENST00000435532 PLXNB3Q9ULL4 1909 aa12.24□□□□□ -0.45
NEDD4-202ENST00000435532 ANGP03950 147 aaKnown RBP12.23□□□□□ -0.45
NEDD4-202ENST00000435532 MRPL23Q16540 153 aaKnown RBP12.23□□□□□ -0.45
NEDD4-202ENST00000435532 APRG1Q8IVJ8 170 aa12.23□□□□□ -0.45
NEDD4-202ENST00000435532 CITED2Q99967 270 aaPredicted RBP12.23□□□□□ -0.45
NEDD4-202ENST00000435532 U3KQE9 123 aa12.23□□□□□ -0.45
NEDD4-202ENST00000435532 TYMSP04818 313 aa12.23□□□□□ -0.45
NEDD4-202ENST00000435532 GATD1Q8NB37 220 aa12.23□□□□□ -0.45
NEDD4-202ENST00000435532 WFDC11Q8NEX6 87 aa12.23□□□□□ -0.45
NEDD4-202ENST00000435532 TP53TG1Q9Y2A0 90 aa12.23□□□□□ -0.45
NEDD4-202ENST00000435532 ERG28Q9UKR5 140 aa12.23□□□□□ -0.45
NEDD4-202ENST00000435532 Q8N8P6 123 aa12.22□□□□□ -0.45
NEDD4-202ENST00000435532 A0A0J9YY99 117 aa12.22□□□□□ -0.45
NEDD4-202ENST00000435532 C5orf30Q96GV9 206 aa12.22□□□□□ -0.45
NEDD4-202ENST00000435532 C2orf70A6NJV1 201 aa12.22□□□□□ -0.45
NEDD4-202ENST00000435532 INAFM1C9JVW0 142 aa12.22□□□□□ -0.45
NEDD4-202ENST00000435532 INS-IGF2F8WCM5 200 aa12.22□□□□□ -0.45
NEDD4-202ENST00000435532 GPHB5Q86YW7 130 aa12.22□□□□□ -0.45
NEDD4-202ENST00000435532 BCL6BQ8N143 479 aaPredicted RBP12.22□□□□□ -0.45
NEDD4-202ENST00000435532 SDHAF1A6NFY7 115 aa12.22□□□□□ -0.45
NEDD4-202ENST00000435532 FXYD5Q96DB9 178 aa12.22□□□□□ -0.45
NEDD4-202ENST00000435532 IGKV2D-24A0A075B6R9 120 aa12.21□□□□□ -0.45
NEDD4-202ENST00000435532 ATXN8Q156A1 80 aa12.21□□□□□ -0.45
NEDD4-202ENST00000435532 FAM104BQ5XKR9 115 aa12.21□□□□□ -0.45
NEDD4-202ENST00000435532 GSN-AS1Q9NRJ2 163 aa12.21□□□□□ -0.45
NEDD4-202ENST00000435532 A0A096LPF7 62 aa12.21□□□□□ -0.45
NEDD4-202ENST00000435532 I3L2K1 104 aa12.21□□□□□ -0.45
NEDD4-202ENST00000435532 LMO4P61968 165 aa12.21□□□□□ -0.45
NEDD4-202ENST00000435532 TMEM213A2RRL7 107 aa12.21□□□□□ -0.46
NEDD4-202ENST00000435532 C16orf54Q6UWD8 224 aa12.21□□□□□ -0.46
NEDD4-202ENST00000435532 OBSL1O75147 1896 aa12.21□□□□□ -0.46
NEDD4-202ENST00000435532 Q6YL49 198 aa12.21□□□□□ -0.46
NEDD4-202ENST00000435532 NHP2Q9NX24 153 aaKnown RBP12.2□□□□□ -0.46
NEDD4-202ENST00000435532 FSTL3O95633 263 aa12.2□□□□□ -0.46
NEDD4-202ENST00000435532 IGLV1-47P01700 117 aa12.2□□□□□ -0.46
NEDD4-202ENST00000435532 AKAP6Q13023 2319 aa12.2□□□□□ -0.46
NEDD4-202ENST00000435532 NPC2P61916 151 aa12.2□□□□□ -0.46
NEDD4-202ENST00000435532 FAM231DQ6ZW35 169 aa12.2□□□□□ -0.46
NEDD4-202ENST00000435532 IGHV3-38A0A0C4DH36 116 aa12.19□□□□□ -0.46
NEDD4-202ENST00000435532 HLA-DRB4P13762 266 aa12.19□□□□□ -0.46
NEDD4-202ENST00000435532 HLA-DRB4X5D2U9 266 aa12.19□□□□□ -0.46
NEDD4-202ENST00000435532 ZFHX2Q9C0A1 2572 aaPredicted RBP12.19□□□□□ -0.46
NEDD4-202ENST00000435532 WISP2O76076 250 aa12.19□□□□□ -0.46
NEDD4-202ENST00000435532 DOCK9Q9BZ29 2069 aa12.19□□□□□ -0.46
NEDD4-202ENST00000435532 A0A1B0GWB2 263 aa12.19□□□□□ -0.46
NEDD4-202ENST00000435532 HSD52Q0P140 79 aa12.19□□□□□ -0.46
NEDD4-202ENST00000435532 IGKV1OR2-108A0A075B7D4 117 aa12.19□□□□□ -0.46
NEDD4-202ENST00000435532 PIEZO1Q92508 2521 aa12.19□□□□□ -0.46
NEDD4-202ENST00000435532 FNDC4Q9H6D8 234 aaPredicted RBP12.18□□□□□ -0.46
NEDD4-202ENST00000435532 COL4A3Q01955 1670 aa12.18□□□□□ -0.46
NEDD4-202ENST00000435532 F8W735 103 aaPredicted RBP12.18□□□□□ -0.46
NEDD4-202ENST00000435532 HEATR5AQ86XA9 2040 aa12.18□□□□□ -0.46
NEDD4-202ENST00000435532 K7EIM0 57 aa12.18□□□□□ -0.46
NEDD4-202ENST00000435532 PRR20EP86478 221 aa12.18□□□□□ -0.46
NEDD4-202ENST00000435532 PRR20CP86479 221 aa12.18□□□□□ -0.46
NEDD4-202ENST00000435532 PRR20DP86480 221 aa12.18□□□□□ -0.46
NEDD4-202ENST00000435532 PRR20BP86481 221 aa12.18□□□□□ -0.46
NEDD4-202ENST00000435532 PRR20AP86496 221 aa12.18□□□□□ -0.46
NEDD4-202ENST00000435532 TTC32Q5I0X7 151 aa12.18□□□□□ -0.46
NEDD4-202ENST00000435532 C2orf66Q6UXQ4 117 aa12.18□□□□□ -0.46
NEDD4-202ENST00000435532 ZNF48Q96MX3 618 aaPredicted RBP12.18□□□□□ -0.46
NEDD4-202ENST00000435532 C1orf43Q9BWL3 253 aa12.18□□□□□ -0.46
NEDD4-202ENST00000435532 CRYGCP07315 174 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 PMVKQ15126 192 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 LAMTOR3Q9UHA4 124 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 SPCS1Q9Y6A9 102 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 F6UB75 175 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 HIST1H2BKO60814 126 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 HIST1H2BJP06899 126 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 HIST1H2BOP23527 126 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 HIST1H2BBP33778 126 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 HIST1H2BDP58876 126 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 HIST1H2BCP62807 126 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 HIST2H2BEQ16778 126 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.17□□□□□ -0.46
NEDD4-202ENST00000435532 HIST1H2BHQ93079 126 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 DNAJC30Q96LL9 226 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 HIST1H2BNQ99877 126 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 HIST1H2BMQ99879 126 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 MEGF9Q9H1U4 602 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 KLF12Q9Y4X4 402 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 C10orf126Q8N4M7 172 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 ORAOV1Q8WV07 137 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 RITA1Q96K30 269 aa12.17□□□□□ -0.46
NEDD4-202ENST00000435532 DYNAPQ8N1N2 210 aa12.16□□□□□ -0.46
NEDD4-202ENST00000435532 LY6G6DO95868 133 aa12.16□□□□□ -0.46
NEDD4-202ENST00000435532 CTSGP08311 255 aa12.16□□□□□ -0.46
NEDD4-202ENST00000435532 NEGR1Q7Z3B1 354 aa12.16□□□□□ -0.46
NEDD4-202ENST00000435532 CHAC1Q9BUX1 264 aa12.16□□□□□ -0.46
NEDD4-202ENST00000435532 AGPAT4-IT1Q9H0P7 198 aa12.16□□□□□ -0.46
NEDD4-202ENST00000435532 ZGRF1Q86YA3 2104 aa12.16□□□□□ -0.46
NEDD4-202ENST00000435532 UBE2CO00762 179 aa12.16□□□□□ -0.46
NEDD4-202ENST00000435532 HERVK_113P63121 156 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms