RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 IAH1Q2TAA2 248 aaPredicted RBP3.87□□□□□ -1.79
HDAC9-213ENST00000433709 SOHLH1Q5JUK2 328 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 LCN15Q6UWW0 184 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 ZNF493Q6ZR52 646 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 BPIFA4PQ86YQ2 179 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 FAM24BQ8N5W8 94 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 C15orf53Q8NAA6 179 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 OR1L4Q8NGR5 311 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 MITD1Q8WV92 249 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 IGF2BP2-AS1Q96M15 143 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 PFDN5Q99471 154 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 NIPSNAP3BQ9BS92 247 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 SHANK2-AS3Q9BTD1 123 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 RSG1Q9BU20 258 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 SLC25A39Q9BZJ4 359 aaPredicted RBP3.87□□□□□ -1.79
HDAC9-213ENST00000433709 C20orf85Q9H1P6 137 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 SLC25A22Q9H936 323 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 KCNIP2Q9NS61 270 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 GSKIPQ9P0R6 139 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 XCL2Q9UBD3 114 aa3.87□□□□□ -1.79
HDAC9-213ENST00000433709 LYRM1O43325 122 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 SSSCA1O60232 199 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 ATP6V1G1O75348 118 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 MPDU1O75352 247 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 LINC00869P0C866 280 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 RBMY1A1P0DJD3 496 aaKnown RBP3.86□□□□□ -1.79
HDAC9-213ENST00000433709 RBMY1CP0DJD4 496 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 IL7P13232 177 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 S100A11P31949 105 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 RBMY1FQ15415 496 aaKnown RBP3.86□□□□□ -1.79
HDAC9-213ENST00000433709 FAM78BQ5VT40 261 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 TMEM14EPQ6UXP3 125 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 ACOT7LQ6ZUV0 252 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 STX12Q86Y82 276 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 APLNQ9ULZ1 77 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 PXMP4Q9Y6I8 212 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 COL7A1Q02388 2944 aa3.86□□□□□ -1.79
HDAC9-213ENST00000433709 PRKDCP78527 4128 aaKnown RBP3.85□□□□□ -1.79
HDAC9-213ENST00000433709 FAM240BA0A1B0GVZ2 78 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 A8MTW9 85 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 H3BP45 60 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 H3BRN7 92 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 DEFB4AO15263 64 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 COX7A2P2O60397 106 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 TCRBP04435 133 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 BCAP31P51572 246 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 CAV2P51636 162 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 TAS2R60P59551 318 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 DAD1P61803 113 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 RHOBP62745 196 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 CXCL6P80162 114 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 EWSR1Q01844 656 aaKnown RBP eCLIP3.85□□□□□ -1.79
HDAC9-213ENST00000433709 FGL1Q08830 312 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 PSG3Q16557 428 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 C12orf74Q32Q52 190 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 C10orf113Q5VZT2 155 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 UBE2DNLQ8IWF7 75 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 ZNF738Q8NE65 137 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 OR10J6PQ8NGY7 276 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 ZNF431Q8TF32 576 aaPredicted RBP3.85□□□□□ -1.79
HDAC9-213ENST00000433709 C2orf50Q96LR7 162 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 SLC25A31Q9H0C2 315 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 ARL6Q9H0F7 186 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 ARV1Q9H2C2 271 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 PRELID1Q9Y255 219 aa3.85□□□□□ -1.79
HDAC9-213ENST00000433709 IGKV1OR2-108A0A075B7D4 117 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 FAM25EA8MYX2 175 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 BOLA2-SMG1P6H3BVE0 249 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 H7BYZ3 331 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 AGPAT2O15120 278 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 METTL15P1P0C7V9 234 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 PET100P0DJ07 73 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 CDKN1BP46527 198 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 RPL29P47914 159 aaKnown RBP3.84□□□□□ -1.79
HDAC9-213ENST00000433709 CAMLGP49069 296 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 SULT1A1P50225 295 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 CNN1P51911 297 aaKnown RBP3.84□□□□□ -1.79
HDAC9-213ENST00000433709 DEFA1P59665 94 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 DEFA3P59666 94 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 PDE6HQ13956 83 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 FAM222AQ5U5X8 452 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 LINC00305Q7Z4B0 112 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 ZNF709Q8N972 641 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 OR8A1Q8NGG7 326 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 C16orf74Q96GX8 76 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 LINC01587Q99440 93 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 UQCC1Q9NVA1 299 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 CELA1Q9UNI1 258 aa3.84□□□□□ -1.79
HDAC9-213ENST00000433709 YTHDF2Q9Y5A9 579 aaKnown RBP3.84□□□□□ -1.79
HDAC9-213ENST00000433709 TIMM8BQ9Y5J9 83 aaPredicted RBP3.84□□□□□ -1.79
HDAC9-213ENST00000433709 LINC00854A0A1B0GVQ3 168 aa3.83□□□□□ -1.8
HDAC9-213ENST00000433709 C7orf66A4D0T2 115 aa3.83□□□□□ -1.8
HDAC9-213ENST00000433709 C17orf112F2Z3M2 114 aa3.83□□□□□ -1.8
HDAC9-213ENST00000433709 ATP5G1P05496 136 aa3.83□□□□□ -1.8
HDAC9-213ENST00000433709 SNRPCP09234 159 aaKnown RBP3.83□□□□□ -1.8
HDAC9-213ENST00000433709 HIST1H1EP10412 219 aaKnown RBP3.83□□□□□ -1.8
HDAC9-213ENST00000433709 CXCL3P19876 107 aa3.83□□□□□ -1.8
HDAC9-213ENST00000433709 LEPP41159 167 aa3.83□□□□□ -1.8
HDAC9-213ENST00000433709 ATP5G3P48201 142 aa3.83□□□□□ -1.8
HDAC9-213ENST00000433709 EMP1P54849 157 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms