RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 PCDH15Q96QU1 1955 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 C19orf71A6NCJ1 209 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 MEIS3P1A6NDR6 274 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 DPM2O94777 84 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 NPYP01303 97 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 S100A3P33764 101 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 SNRPD2P62316 118 aaKnown RBP2.84□□□□□ -1.95
USP54-206ENST00000433394 RPL38P63173 70 aaKnown RBP2.84□□□□□ -1.95
USP54-206ENST00000433394 PSG9Q00887 426 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 EIF3IQ13347 325 aaKnown RBP2.84□□□□□ -1.95
USP54-206ENST00000433394 IBA57Q5T440 356 aaKnown RBP2.84□□□□□ -1.95
USP54-206ENST00000433394 COMMD6Q7Z4G1 85 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 DEFB125Q8N687 156 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 OR8B12Q8NGG6 310 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 RAB2BQ8WUD1 216 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 CCL13Q99616 98 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 OR8D2Q9GZM6 311 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 CCDC167Q9P0B6 97 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 NAT8Q9UHE5 227 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 AK3Q9UIJ7 227 aa2.84□□□□□ -1.95
USP54-206ENST00000433394 SOX21Q9Y651 276 aaPredicted RBP2.84□□□□□ -1.95
USP54-206ENST00000433394 ZFHX2Q9C0A1 2572 aaPredicted RBP2.83□□□□□ -1.96
USP54-206ENST00000433394 SPTBP11277 2137 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 TMED7-TICAM2A0A0A6YYA0 188 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 TRGV4A0A0C4DH28 118 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 IGHV1-69-2A0A0G2JMI3 117 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 HLA-DRB1P01911 266 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 CSN2P05814 226 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 SCTP09683 121 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 AKAIN1P0CW23 69 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 CCL3P10147 92 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 SRIP30626 198 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 SSR2P43308 183 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 FXYD7P58549 80 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 DEFA1P59665 94 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 CCSMST1Q4G0I0 132 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 OR2T4Q8NH00 348 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 GNPNAT1Q96EK6 184 aaPredicted RBP2.83□□□□□ -1.96
USP54-206ENST00000433394 ADAT3Q96EY9 351 aaPredicted RBP2.83□□□□□ -1.96
USP54-206ENST00000433394 NMNAT3Q96T66 252 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 PRADC1Q9BSG0 188 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 SPANXDQ9BXN6 97 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 NDUFB11Q9NX14 153 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 SCN3BQ9NY72 215 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 TAAR3PQ9P1P4 343 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 PXMP4Q9Y6I8 212 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 MAP1BP46821 2468 aaKnown RBP2.83□□□□□ -1.96
USP54-206ENST00000433394 CCDC88CQ9P219 2028 aa2.83□□□□□ -1.96
USP54-206ENST00000433394 NINQ8N4C6 2090 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 ODF3BA8MYP8 253 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 FNDC10F2Z333 226 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 C3orf84H3BNL1 204 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 CCL25O15444 150 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 BCL2P10415 239 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 RPS4Y1P22090 263 aaKnown RBP2.82□□□□□ -1.96
USP54-206ENST00000433394 PEBP1P30086 187 aaKnown RBP2.82□□□□□ -1.96
USP54-206ENST00000433394 FUSP35637 526 aaKnown RBP eCLIP2.82□□□□□ -1.96
USP54-206ENST00000433394 HINT1P49773 126 aaPredicted RBP2.82□□□□□ -1.96
USP54-206ENST00000433394 S100A10P60903 97 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 AKR1C1Q04828 323 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 DEFB133Q30KQ1 61 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 BCL2L15Q5TBC7 163 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 GLT8D1Q68CQ7 371 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 SLC48A1Q6P1K1 146 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 RPS27LQ71UM5 84 aaKnown RBP2.82□□□□□ -1.96
USP54-206ENST00000433394 DEFB107AQ8IZN7 70 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 NUP35Q8NFH5 326 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 OR51A4Q8NGJ6 313 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 CCL4L1Q8NHW4 92 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 TMEM106AQ96A25 262 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 SNHG12Q9BXW3 62 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 TCEAL2Q9H3H9 227 aaPredicted RBP2.82□□□□□ -1.96
USP54-206ENST00000433394 OR5AC2Q9NZP5 309 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 KLK5Q9Y337 293 aaPredicted RBP2.82□□□□□ -1.96
USP54-206ENST00000433394 MED31Q9Y3C7 131 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 WDFY4Q6ZS81 3184 aa2.82□□□□□ -1.96
USP54-206ENST00000433394 CNTRLQ7Z7A1 2325 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 CEP295Q9C0D2 2601 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 C9JCJ5 164 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 H0YGG7 62 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 FXYD1O00168 92 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 GPX1P07203 203 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 CSRP1P21291 193 aaKnown RBP2.81□□□□□ -1.96
USP54-206ENST00000433394 CD24P25063 80 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 XCL1P47992 114 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 DEFA3P59666 94 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 ZNF181Q2M3W8 571 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 C12orf74Q32Q52 190 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.81□□□□□ -1.96
USP54-206ENST00000433394 OR52R1Q8NGF1 315 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 OR51T1Q8NGJ9 327 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 CXorf21Q9HAI6 301 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 BCL2L10Q9HD36 194 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 BOKQ9UMX3 212 aaPredicted RBP2.81□□□□□ -1.96
USP54-206ENST00000433394 CYSLTR1Q9Y271 337 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 NUP210LQ5VU65 1888 aa2.81□□□□□ -1.96
USP54-206ENST00000433394 SPTBN4Q9H254 2564 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 ACACAQ13085 2346 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 SCN3AQ9NY46 2000 aa2.8□□□□□ -1.96
USP54-206ENST00000433394 TRBV19A0A075B6N1 114 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms