RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MAGOHBQ96A72 148 aaKnown RBP1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 ROPN1LQ96C74 230 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 MRPL57Q9BQC6 102 aaKnown RBP1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR2H1Q9GZK4 316 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 XAGE1AQ9HD64 81 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 RASL12Q9NYN1 266 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 ATPIF1Q9UII2 106 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 PCTPQ9UKL6 214 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 HILPDAQ9Y5L2 63 aa1.24□□□□□ -2.21
HMGB1P27-201ENST00000431429 SACSQ9NZJ4 4579 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 TGIF2-C20orf24A0A0A6YYL0 155 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 FUOMA2VDF0 154 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 GGT3PA6NGU5 568 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 IGLV1-51P01701 117 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 C1QCP02747 245 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 UCHL1P09936 223 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 TAS2R20P59543 309 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 NCALDP61601 193 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 LSM6P62312 80 aaKnown RBP1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 IFITM2Q01629 132 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 ZNF90Q03938 601 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 DEFB136Q30KP8 78 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 C10orf128Q5T292 105 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 LINC00322Q6ZN03 302 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 ZCCHC23Q6ZST2 131 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 HIST2H3AQ71DI3 136 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 LYG2Q86SG7 212 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 C10orf111Q8N326 155 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR5D16Q8NGK9 328 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR13C8Q8NGS7 320 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR2T4Q8NH00 348 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 DEFB104AQ8WTQ1 72 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 ITFG2Q969R8 447 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 NABP2Q9BQ15 211 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 TXNDC17Q9BRA2 123 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 C6orf62Q9GZU0 229 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 FKBP14Q9NWM8 211 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 NDUFB11Q9NX14 153 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 ANGPT4Q9Y264 503 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 NDUFAF1Q9Y375 327 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 DNAH9Q9NYC9 4486 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 SORL1Q92673 2214 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 KMT2AQ03164 3969 aa1.23□□□□□ -2.21
HMGB1P27-201ENST00000431429 KIAA1109Q2LD37 5005 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 HERC1Q15751 4861 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 hADV38S2A0JD32 116 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 ARRDC5A6NEK1 342 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 PRORSD1PA6NEY8 169 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 TMEM210A6NLX4 147 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 I3L521 148 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 M0R2N4 97 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 APOC1P02654 83 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 RPS17P08708 135 aaKnown RBP1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 SCTP09683 121 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 FGF6P10767 208 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 ALOX5APP20292 161 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 PSMB8P28062 276 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 PHBP35232 272 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 RANP62826 216 aaKnown RBP1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 HBA1P69905 142 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 CAV1Q03135 178 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 PRB3Q04118 309 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 FABP9Q0Z7S8 132 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 GUK1Q16774 197 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 ACOT6Q3I5F7 207 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 C10orf99Q6UWK7 81 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 Q6ZTI0 123 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 UBE2DNLQ8IWF7 75 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 FAM216BQ8N7L0 139 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 TCTEX1D1Q8N7M0 179 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 ZNF676Q8N7Q3 588 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 OR1L8Q8NGR8 309 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 RASSF5Q8WWW0 418 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 SLC7A6Q92536 515 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 SPTSSAQ969W0 71 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 PPP3R2Q96LZ3 170 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 ADAT1Q9BUB4 502 aaKnown RBP1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 TMEM133Q9H2Q1 129 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 RSL24D1Q9UHA3 163 aaKnown RBP1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 HHLA3Q9XRX5 114 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 AMMECR1Q9Y4X0 333 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 LSM5Q9Y4Y9 91 aaKnown RBP1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 TIMM22Q9Y584 194 aa1.22□□□□□ -2.21
HMGB1P27-201ENST00000431429 IGHV3-64A0A075B6Q5 118 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 TRAV10A0A0B4J240 114 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 A0A1B0GV50 99 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 A0A1B0GWA3 101 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 FAM159BA6NKW6 160 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 SMIM23A6NLE4 172 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 ZNF705FA8MVS1 300 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 C5orf58C9J3I9 102 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 FNDC10F2Z333 226 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 H3BRN7 92 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 BUB1B-PAK6H3BSN5 160 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 HMGN4O00479 90 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 CHP2O43745 196 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 TCRBP04435 133 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 CDKN2CP42773 168 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 SULT1A1P50225 295 aa1.21□□□□□ -2.22
HMGB1P27-201ENST00000431429 SERPINB9P50453 376 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms