RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 GOLT1AQ6ZVE7 132 aa9.11□□□□□ -0.95
VRK3-203ENST00000424804 ZNF492Q9P255 531 aa9.11□□□□□ -0.95
VRK3-203ENST00000424804 TIMM8BQ9Y5J9 83 aaPredicted RBP9.11□□□□□ -0.95
VRK3-203ENST00000424804 CBY3A6NI87 242 aa9.1□□□□□ -0.95
VRK3-203ENST00000424804 RGS13O14921 159 aa9.1□□□□□ -0.95
VRK3-203ENST00000424804 PRR9Q5T870 116 aa9.1□□□□□ -0.95
VRK3-203ENST00000424804 ZNF493Q6ZR52 646 aa9.1□□□□□ -0.95
VRK3-203ENST00000424804 SSX7Q7RTT5 188 aa9.1□□□□□ -0.95
VRK3-203ENST00000424804 ZNF575Q86XF7 245 aa9.1□□□□□ -0.95
VRK3-203ENST00000424804 RNASE8Q8TDE3 154 aaKnown RBP9.1□□□□□ -0.95
VRK3-203ENST00000424804 ARPC5LQ9BPX5 153 aa9.1□□□□□ -0.95
VRK3-203ENST00000424804 PYGO2Q9BRQ0 406 aa9.1□□□□□ -0.95
VRK3-203ENST00000424804 GAGE12BA1L429 117 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 KLLNB2CW77 178 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 F5H768 121 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 GAGE7O76087 117 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 CXorf1O96002 111 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 GAGE12FP0CL80 117 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 GAGE12GP0CL81 117 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 GAGE12IP0CL82 117 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 FGF8P55075 233 aaPredicted RBP9.09□□□□□ -0.95
VRK3-203ENST00000424804 Q6ZQT7 251 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 ZFAND2AQ8N6M9 145 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 OR11H4Q8NGC9 324 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 FAM19A4Q96LR4 140 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 SGK494Q96LW2 274 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 ZNF471Q9BX82 626 aaPredicted RBP9.09□□□□□ -0.95
VRK3-203ENST00000424804 CYTL1Q9NRR1 136 aa9.09□□□□□ -0.95
VRK3-203ENST00000424804 hCG_2014768A0A024R1R8 64 aa9.08□□□□□ -0.96
VRK3-203ENST00000424804 TRAV8-1A0A0A6YYK1 113 aa9.08□□□□□ -0.96
VRK3-203ENST00000424804 CTXND1A0A1B0GTU2 59 aa9.08□□□□□ -0.96
VRK3-203ENST00000424804 KANTRA0A1W2PQU2 76 aa9.08□□□□□ -0.96
VRK3-203ENST00000424804 RBAKDNA6NC62 111 aa9.08□□□□□ -0.96
VRK3-203ENST00000424804 PFDN1O60925 122 aa9.08□□□□□ -0.96
VRK3-203ENST00000424804 CRISP2P16562 243 aa9.08□□□□□ -0.96
VRK3-203ENST00000424804 MUC21Q5SSG8 566 aa9.08□□□□□ -0.96
VRK3-203ENST00000424804 KCNRGQ8N5I3 272 aa9.08□□□□□ -0.96
VRK3-203ENST00000424804 EIF4E3Q8N5X7 224 aaKnown RBP9.08□□□□□ -0.96
VRK3-203ENST00000424804 TMPRSS5Q9H3S3 457 aa9.08□□□□□ -0.96
VRK3-203ENST00000424804 TMEM167BQ9NRX6 74 aa9.08□□□□□ -0.96
VRK3-203ENST00000424804 F6UZH7 168 aa9.07□□□□□ -0.96
VRK3-203ENST00000424804 ATP5G1P05496 136 aa9.07□□□□□ -0.96
VRK3-203ENST00000424804 ATP5G3P48201 142 aa9.07□□□□□ -0.96
VRK3-203ENST00000424804 UBE2G2P60604 165 aa9.07□□□□□ -0.96
VRK3-203ENST00000424804 SUMO1P63165 101 aaKnown RBP9.07□□□□□ -0.96
VRK3-203ENST00000424804 ZNF726P1Q15940 193 aa9.07□□□□□ -0.96
VRK3-203ENST00000424804 UBE2DNLQ8IWF7 75 aa9.07□□□□□ -0.96
VRK3-203ENST00000424804 GSN-AS1Q9NRJ2 163 aa9.07□□□□□ -0.96
VRK3-203ENST00000424804 NAGKQ9UJ70 344 aa9.07□□□□□ -0.96
VRK3-203ENST00000424804 IGHV1OR15-1A0A075B7D0 117 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 A0A0D9SG52 128 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 HMSDA8MTL9 139 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 BCL2L11O43521 198 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 ZNF324O75467 553 aaPredicted RBP9.06□□□□□ -0.96
VRK3-203ENST00000424804 NMBP08949 121 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 OR5I1Q13606 314 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 ZNF345Q14585 488 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 C1orf134Q5TEV5 83 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 C5orf17Q8NAS9 161 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 ZNF680Q8NEM1 530 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 ZNRF2Q8NHG8 242 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 ST6GAL2Q96JF0 529 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 TP53TG3Q9ULZ0 132 aa9.06□□□□□ -0.96
VRK3-203ENST00000424804 TRGV1A0A0A0MS02 117 aa9.05□□□□□ -0.96
VRK3-203ENST00000424804 A0A1B0GV50 99 aa9.05□□□□□ -0.96
VRK3-203ENST00000424804 MAP1LC3B2A6NCE7 125 aa9.05□□□□□ -0.96
VRK3-203ENST00000424804 K7EQM0 130 aa9.05□□□□□ -0.96
VRK3-203ENST00000424804 NUDT3O95989 172 aa9.05□□□□□ -0.96
VRK3-203ENST00000424804 IFNA7P01567 189 aa9.05□□□□□ -0.96
VRK3-203ENST00000424804 FAM3BP58499 235 aaPredicted RBP9.05□□□□□ -0.96
VRK3-203ENST00000424804 TNP2Q05952 138 aa9.05□□□□□ -0.96
VRK3-203ENST00000424804 C15orf53Q8NAA6 179 aa9.05□□□□□ -0.96
VRK3-203ENST00000424804 NDFIP1Q9BT67 221 aa9.05□□□□□ -0.96
VRK3-203ENST00000424804 MAP1LC3BQ9GZQ8 125 aa9.05□□□□□ -0.96
VRK3-203ENST00000424804 TREM1Q9NP99 234 aa9.05□□□□□ -0.96
VRK3-203ENST00000424804 TRGV2A0A075B6R0 118 aa9.04□□□□□ -0.96
VRK3-203ENST00000424804 GGTLC3B5MD39 225 aa9.04□□□□□ -0.96
VRK3-203ENST00000424804 TCRAP04437 139 aa9.04□□□□□ -0.96
VRK3-203ENST00000424804 FHITP49789 147 aa9.04□□□□□ -0.96
VRK3-203ENST00000424804 FAM159AQ6UWV7 190 aa9.04□□□□□ -0.96
VRK3-203ENST00000424804 Q6ZTI0 123 aa9.04□□□□□ -0.96
VRK3-203ENST00000424804 TMUB2Q71RG4 321 aa9.04□□□□□ -0.96
VRK3-203ENST00000424804 PRNTQ86SH4 94 aa9.04□□□□□ -0.96
VRK3-203ENST00000424804 FAM213BQ8TBF2 198 aa9.04□□□□□ -0.96
VRK3-203ENST00000424804 KLF12Q9Y4X4 402 aa9.04□□□□□ -0.96
VRK3-203ENST00000424804 LENEPQ9Y5L5 61 aa9.04□□□□□ -0.96
VRK3-203ENST00000424804 TRBV7-9A0A0J9YWB2 115 aa9.03□□□□□ -0.96
VRK3-203ENST00000424804 ZNF415Q09FC8 603 aa9.03□□□□□ -0.96
VRK3-203ENST00000424804 TMEM183BQ1AE95 376 aa9.03□□□□□ -0.96
VRK3-203ENST00000424804 ANXA2RQ3ZCQ2 193 aa9.03□□□□□ -0.96
VRK3-203ENST00000424804 TMEM183AQ8IXX5 376 aa9.03□□□□□ -0.96
VRK3-203ENST00000424804 C11orf72Q8NBR9 251 aa9.03□□□□□ -0.96
VRK3-203ENST00000424804 STOML3Q8TAV4 291 aa9.03□□□□□ -0.96
VRK3-203ENST00000424804 SUN5Q8TC36 379 aa9.03□□□□□ -0.96
VRK3-203ENST00000424804 TMED6Q8WW62 240 aa9.03□□□□□ -0.96
VRK3-203ENST00000424804 MRPL16Q9NX20 251 aaKnown RBP9.03□□□□□ -0.96
VRK3-203ENST00000424804 EPDR1Q9UM22 224 aa9.03□□□□□ -0.96
VRK3-203ENST00000424804 PSG8Q9UQ74 426 aa9.03□□□□□ -0.96
VRK3-203ENST00000424804 LINC00588Q9Y4M8 146 aa9.03□□□□□ -0.96
VRK3-203ENST00000424804 A0A0J9YY99 117 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms