RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 ANXA2RQ3ZCQ2 193 aa6.68□□□□□ -1.34
UBR4-206ENST00000419533 LINC00479Q96M42 142 aa6.68□□□□□ -1.34
UBR4-206ENST00000419533 OVOL2Q9BRP0 275 aa6.68□□□□□ -1.34
UBR4-206ENST00000419533 POLR3KQ9Y2Y1 108 aaPredicted RBP6.68□□□□□ -1.34
UBR4-206ENST00000419533 ZGRF1Q86YA3 2104 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 ABCA4P78363 2273 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 TRAV12-2A0A075B6T6 113 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 C3orf79P0CE67 100 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 PRR25Q96S07 402 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 AKAP6Q13023 2319 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 TEX48A0A1B0GUV7 120 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 Q8NFD4 153 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 EML5Q05BV3 1969 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 FER1L5A0AVI2 2057 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 NPC2P61916 151 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 NPBQ8NG41 125 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 ZNRF2Q8NHG8 242 aa6.67□□□□□ -1.34
UBR4-206ENST00000419533 MRAPQ8TCY5 172 aa6.66□□□□□ -1.34
UBR4-206ENST00000419533 PHF3Q92576 2039 aaKnown RBP6.66□□□□□ -1.34
UBR4-206ENST00000419533 PRSS57Q6UWY2 283 aa6.66□□□□□ -1.34
UBR4-206ENST00000419533 SEM1Q6ZVN7 128 aa6.66□□□□□ -1.34
UBR4-206ENST00000419533 RSPO3Q9BXY4 272 aaPredicted RBP6.66□□□□□ -1.34
UBR4-206ENST00000419533 KRTAP27-1Q3LI81 207 aa6.66□□□□□ -1.34
UBR4-206ENST00000419533 SPAG8Q99932 426 aaPredicted RBP6.66□□□□□ -1.34
UBR4-206ENST00000419533 TMEM95Q3KNT9 176 aa6.66□□□□□ -1.34
UBR4-206ENST00000419533 MPV17L2Q567V2 206 aa6.66□□□□□ -1.34
UBR4-206ENST00000419533 PRR31Q5SQ13 230 aa6.66□□□□□ -1.34
UBR4-206ENST00000419533 COX11Q9Y6N1 276 aa6.66□□□□□ -1.34
UBR4-206ENST00000419533 CGB3P0DN86 165 aa6.66□□□□□ -1.34
UBR4-206ENST00000419533 SFTA2Q6UW10 78 aa6.66□□□□□ -1.34
UBR4-206ENST00000419533 MRPL53Q96EL3 112 aaKnown RBP6.66□□□□□ -1.34
UBR4-206ENST00000419533 TP53TG1Q9Y2A0 90 aa6.66□□□□□ -1.34
UBR4-206ENST00000419533 ZNF407Q9C0G0 2248 aa6.65□□□□□ -1.34
UBR4-206ENST00000419533 TMEM213A2RRL7 107 aa6.65□□□□□ -1.34
UBR4-206ENST00000419533 INS-IGF2F8WCM5 200 aa6.65□□□□□ -1.34
UBR4-206ENST00000419533 Q8N8P6 123 aa6.65□□□□□ -1.34
UBR4-206ENST00000419533 GOLGB1Q14789 3259 aaKnown RBP6.65□□□□□ -1.34
UBR4-206ENST00000419533 TRAV8-2A0A0B4J237 113 aa6.65□□□□□ -1.34
UBR4-206ENST00000419533 FAM104BQ5XKR9 115 aa6.65□□□□□ -1.34
UBR4-206ENST00000419533 ZNF491Q8N8L2 437 aa6.65□□□□□ -1.34
UBR4-206ENST00000419533 ZNF479Q96JC4 524 aa6.65□□□□□ -1.34
UBR4-206ENST00000419533 LAMTOR3Q9UHA4 124 aa6.65□□□□□ -1.34
UBR4-206ENST00000419533 GP9P14770 177 aa6.65□□□□□ -1.35
UBR4-206ENST00000419533 SAMD5Q5TGI4 173 aa6.65□□□□□ -1.35
UBR4-206ENST00000419533 DLX4Q92988 240 aaPredicted RBP6.65□□□□□ -1.35
UBR4-206ENST00000419533 IGF2BP2-AS1Q96M15 143 aa6.65□□□□□ -1.35
UBR4-206ENST00000419533 IGLC7A0M8Q6 106 aa6.65□□□□□ -1.35
UBR4-206ENST00000419533 RHOHQ15669 191 aa6.65□□□□□ -1.35
UBR4-206ENST00000419533 SRCAPQ6ZRS2 3230 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 NBASA2RRP1 2371 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 TP53BP1Q12888 1972 aaPredicted RBP6.64□□□□□ -1.35
UBR4-206ENST00000419533 Q0VG73 95 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 GAGE6Q13070 117 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 SPRNQ5BIV9 151 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 NKAPP1Q8N9T2 125 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 NRGNQ92686 78 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 SPTBN1Q01082 2364 aaKnown RBP6.64□□□□□ -1.35
UBR4-206ENST00000419533 USF3Q68DE3 2245 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 SDHAF1A6NFY7 115 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 PYGO2Q9BRQ0 406 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 SYS1-DBNDD2H3BUS1 97 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 GUSBP1Q15486 140 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 DEFB136Q30KP8 78 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 C2orf66Q6UXQ4 117 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 FAM231DQ6ZW35 169 aa6.64□□□□□ -1.35
UBR4-206ENST00000419533 NPSP0C0P6 89 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 ANAPC13Q9BS18 74 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 IGHV7-81A0A0B4J1V7 117 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 C19orf84I3L1E1 186 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 CD5LO43866 347 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 SLURP1P55000 103 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 NEGR1Q7Z3B1 354 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 RNF152Q8N8N0 203 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 ZNF114Q8NC26 417 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 PKIGQ9Y2B9 76 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 RBAKDNA6NC62 111 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 PMVKQ15126 192 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 ZC2HC1BQ5TFG8 222 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 KLF12Q9Y4X4 402 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 LENEPQ9Y5L5 61 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 YLPM1P49750 1951 aaKnown RBP6.63□□□□□ -1.35
UBR4-206ENST00000419533 MPDZO75970 2070 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 NUP210LQ5VU65 1888 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 POLEQ07864 2286 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 IGHV1-24A0A0C4DH33 117 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 ESDP10768 282 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 MYCNOSP40205 109 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 FXYD5Q96DB9 178 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 CHAC1Q9BUX1 264 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 TRAV8-4A0A0B4J246 113 aa6.63□□□□□ -1.35
UBR4-206ENST00000419533 TMEM89A2RUT3 159 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 BCL6BQ8N143 479 aaPredicted RBP6.62□□□□□ -1.35
UBR4-206ENST00000419533 NOP10Q9NPE3 64 aaKnown RBP6.62□□□□□ -1.35
UBR4-206ENST00000419533 hDV102S1A0JD36 115 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 CLPSL1A2RUU4 121 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 HLA-DRB4P13762 266 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 OCIAD2Q56VL3 154 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 PIFOQ8TCI5 191 aa6.62□□□□□ -1.35
UBR4-206ENST00000419533 DNAJC30Q96LL9 226 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms