RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 CCL20P78556 96 aa12.56□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 FLI1Q01543 452 aaPredicted RBP12.56□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 CASC10Q5T4H9 136 aa12.56□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 CST9LP1Q5W188 147 aa12.56□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 TVP23CQ96ET8 276 aa12.56□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 C16orf74Q96GX8 76 aa12.56□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 MANBALQ9NQG1 85 aa12.56□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 KLF12Q9Y4X4 402 aa12.56□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 DYNC2H1Q8NCM8 4307 aaKnown RBP12.56□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 TRBV6-1A0A0K0K1D8 114 aa12.55□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 CXorf65A6NEN9 183 aa12.55□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 SPART-AS1P0CW21 52 aa12.55□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 BLOC1S1P78537 153 aa12.55□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 ANXA2RQ3ZCQ2 193 aa12.55□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 SAPCD1Q5SSQ6 148 aa12.55□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 ALKAL2Q6UX46 152 aa12.55□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 RNASE8Q8TDE3 154 aaKnown RBP12.55□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 TMEM263Q8WUH6 116 aaKnown RBP12.55□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 NDFIP1Q9BT67 221 aa12.55□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 TREM1Q9NP99 234 aa12.55□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 DKK2Q9UBU2 259 aa12.55□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 A0A1B0GV50 99 aa12.54□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 PLAC8L1A1L4L8 177 aa12.54□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 PRM2P04554 102 aa12.54□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 ATP5G3P48201 142 aa12.54□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 LYPD6BQ8NI32 183 aa12.54□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 LYRM9A8MSI8 78 aa12.53□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 NANOS2P60321 138 aaKnown RBP12.53□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 COX8CQ7Z4L0 72 aa12.53□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 EIF4E3Q8N5X7 224 aaKnown RBP12.53□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 SGK494Q96LW2 274 aa12.53□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 LINC00479Q96M42 142 aa12.53□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 CELA1Q9UNI1 258 aa12.53□□□□□ -0.4
COMMD3-BMI1-201ENST00000417470 IGHV1OR15-1A0A075B7D0 117 aa12.52□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 C11orf94C9JXX5 98 aa12.52□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 S100A9P06702 114 aaKnown RBP12.52□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 HTN1P15515 57 aa12.52□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 TAGLN2P37802 199 aaKnown RBP12.52□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 C12orf74Q32Q52 190 aa12.52□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 FAM222AQ5U5X8 452 aa12.52□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 FMC1Q96HJ9 113 aa12.52□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 GNG13Q9P2W3 67 aa12.52□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 ZFP30Q9Y2G7 519 aa12.52□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 TRAV21A0A0B4J279 112 aa12.51□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 IFNA1P01562 189 aa12.51□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 EMP1P54849 157 aa12.51□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 PLECQ15149 4684 aaKnown RBP12.51□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 TMEM183BQ1AE95 376 aa12.51□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 TDRG1Q3Y452 100 aa12.51□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 PRNTQ86SH4 94 aa12.51□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 ZNF680Q8NEM1 530 aa12.51□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 C2CD4CQ8TF44 421 aa12.51□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 TIMM8BQ9Y5J9 83 aaPredicted RBP12.51□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 TRAV34A0A0B4J273 112 aa12.5□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 NUPR2A6NF83 97 aa12.5□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 RGS13O14921 159 aa12.5□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 SMUG1Q53HV7 270 aa12.5□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 IBA57Q5T440 356 aaKnown RBP12.5□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 ZFAND6Q6FIF0 208 aa12.5□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 CEMP1Q6PRD7 247 aaPredicted RBP12.5□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 Q6ZQT7 251 aa12.5□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 PHLDA1Q8WV24 401 aaPredicted RBP12.5□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 TP53TG3Q9ULZ0 132 aa12.5□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 AKR1C3P42330 323 aa12.49□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 UBE2G1P62253 170 aa12.49□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 DAZ2Q13117 558 aaKnown RBP12.49□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 Q86TA4 180 aa12.49□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 C11orf72Q8NBR9 251 aa12.49□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 C11orf52Q96A22 123 aa12.49□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 C8orf49Q96NF6 230 aa12.49□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 CBY3A6NI87 242 aa12.48□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 LTAP01374 205 aa12.48□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 PFN1P07737 140 aaKnown RBP12.48□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 BCL2P10415 239 aa12.48□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 MEF2BQ02080 365 aaPredicted RBP12.48□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 TEX261Q6UWH6 196 aa12.48□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 FAM159AQ6UWV7 190 aa12.48□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 Q6ZTC4 211 aa12.48□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 LINC00612Q8N6U2 182 aa12.48□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 VAX2Q9UIW0 290 aa12.48□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 TRAV10A0A0B4J240 114 aa12.47□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 SCO2A0A1W2PP80 73 aa12.47□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 SNURFLB1AK76 121 aa12.47□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 PDE6DO43924 150 aa12.47□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 GCGP01275 180 aa12.47□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 ZNF80P51504 273 aaPredicted RBP12.47□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 KCNS1Q96KK3 526 aa12.47□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 KLK5Q9Y337 293 aaPredicted RBP12.47□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 TCL1AP56279 114 aa12.46□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 NOP10Q9NPE3 64 aaKnown RBP12.46□□□□□ -0.41
COMMD3-BMI1-201ENST00000417470 TRGV11A0A075B6L2 103 aa12.45□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 FABP5P3A8MUU1 101 aa12.45□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 NDUFS6O75380 124 aaKnown RBP12.45□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 DAD1P61803 113 aa12.45□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 MUC21Q5SSG8 566 aa12.45□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 TMEM183AQ8IXX5 376 aa12.45□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 TENM2Q9NT68 2774 aa12.44□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 TCTAP57738 103 aa12.44□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 C18orf15Q96N68 181 aa12.44□□□□□ -0.42
COMMD3-BMI1-201ENST00000417470 MLST8Q9BVC4 326 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms