RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ZNF493Q6ZR52 646 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 WIPF2Q8TF74 440 aaPredicted RBP9.38□□□□□ -0.91
PTPRF-205ENST00000414879 MEGF9Q9H1U4 602 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 BDP1A6H8Y1 2624 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 LMO4P61968 165 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 DEFB121Q5J5C9 76 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 TRBV7-9A0A0J9YWB2 115 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 IGKV1-17P01599 117 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 C16orf54Q6UWD8 224 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 TMEM158Q8WZ71 300 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 AJUBAQ96IF1 538 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 ACACBO00763 2458 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 PRB1P04280 392 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 CTSGP08311 255 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 CKS1BP61024 79 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
PTPRF-205ENST00000414879 CREBBPQ92793 2442 aa9.37□□□□□ -0.91
PTPRF-205ENST00000414879 CUL9Q8IWT3 2517 aa9.37□□□□□ -0.91
PTPRF-205ENST00000414879 WI2-2373I1.2A0A1W2PRP0 233 aa9.37□□□□□ -0.91
PTPRF-205ENST00000414879 TRBV6-1A0A0K0K1D8 114 aa9.37□□□□□ -0.91
PTPRF-205ENST00000414879 MYMXA0A1B0GTQ4 84 aa9.37□□□□□ -0.91
PTPRF-205ENST00000414879 A6NDX4 124 aa9.37□□□□□ -0.91
PTPRF-205ENST00000414879 C9JQL5 133 aa9.37□□□□□ -0.91
PTPRF-205ENST00000414879 ZFP36P26651 326 aaKnown RBP9.37□□□□□ -0.91
PTPRF-205ENST00000414879 ORAOV1Q8WV07 137 aa9.37□□□□□ -0.91
PTPRF-205ENST00000414879 FAM208BQ5VWN6 2430 aa9.37□□□□□ -0.91
PTPRF-205ENST00000414879 TEX22C9J3V5 150 aa9.37□□□□□ -0.91
PTPRF-205ENST00000414879 ANXA2RQ3ZCQ2 193 aa9.37□□□□□ -0.91
PTPRF-205ENST00000414879 TRBV25-1A0A075B6N4 114 aa9.36□□□□□ -0.91
PTPRF-205ENST00000414879 AZU1P20160 251 aa9.36□□□□□ -0.91
PTPRF-205ENST00000414879 FXYD7P58549 80 aa9.36□□□□□ -0.91
PTPRF-205ENST00000414879 C8orf49Q96NF6 230 aa9.36□□□□□ -0.91
PTPRF-205ENST00000414879 GP9P14770 177 aa9.36□□□□□ -0.91
PTPRF-205ENST00000414879 M0R2P5 195 aa9.36□□□□□ -0.91
PTPRF-205ENST00000414879 INSL3P51460 131 aa9.36□□□□□ -0.91
PTPRF-205ENST00000414879 P0C879 139 aa9.36□□□□□ -0.91
PTPRF-205ENST00000414879 BUB3O43684 328 aa9.35□□□□□ -0.91
PTPRF-205ENST00000414879 IGLV2-14P01704 120 aa9.35□□□□□ -0.91
PTPRF-205ENST00000414879 C18orf32Q8TCD1 76 aa9.35□□□□□ -0.91
PTPRF-205ENST00000414879 C20orf144Q9BQM9 153 aa9.35□□□□□ -0.91
PTPRF-205ENST00000414879 OVOL2Q9BRP0 275 aa9.35□□□□□ -0.91
PTPRF-205ENST00000414879 NCOA6Q14686 2063 aaPredicted RBP9.35□□□□□ -0.91
PTPRF-205ENST00000414879 ZC2HC1AQ96GY0 325 aa9.35□□□□□ -0.91
PTPRF-205ENST00000414879 CYYR1Q96J86 154 aa9.35□□□□□ -0.91
PTPRF-205ENST00000414879 SHANK1Q9Y566 2161 aa9.35□□□□□ -0.91
PTPRF-205ENST00000414879 PIEZO1Q92508 2521 aa9.35□□□□□ -0.91
PTPRF-205ENST00000414879 C3orf79P0CE67 100 aa9.35□□□□□ -0.91
PTPRF-205ENST00000414879 A0A087X0K7 114 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 SH2D6Q7Z4S9 175 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 RMI2Q96E14 147 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 AGPAT4-IT1Q9H0P7 198 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 DNAH12Q6ZR08 3092 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 A0A087WWL8 130 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 EBI3Q14213 229 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 CD300EQ496F6 205 aaPredicted RBP9.34□□□□□ -0.91
PTPRF-205ENST00000414879 C11orf71Q6IPW1 123 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 NEGR1Q7Z3B1 354 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 CLPSL1A2RUU4 121 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 MED14OSP0DP75 135 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 C4orf3Q8WVX3 66 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 WISP2O76076 250 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 DEFB130BP0DP73 79 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 DEFB130AP0DP74 79 aa9.34□□□□□ -0.91
PTPRF-205ENST00000414879 PAX2Q02962 417 aa9.33□□□□□ -0.92
PTPRF-205ENST00000414879 DNAJC30Q96LL9 226 aa9.33□□□□□ -0.92
PTPRF-205ENST00000414879 RHOHQ15669 191 aa9.33□□□□□ -0.92
PTPRF-205ENST00000414879 MRPL51Q4U2R6 128 aaKnown RBP9.33□□□□□ -0.92
PTPRF-205ENST00000414879 C2orf66Q6UXQ4 117 aa9.33□□□□□ -0.92
PTPRF-205ENST00000414879 IGHV3-73A0A0B4J1V6 119 aa9.33□□□□□ -0.92
PTPRF-205ENST00000414879 TMEM213A2RRL7 107 aa9.33□□□□□ -0.92
PTPRF-205ENST00000414879 SDHAF1A6NFY7 115 aa9.33□□□□□ -0.92
PTPRF-205ENST00000414879 BLCAPP62952 87 aa9.33□□□□□ -0.92
PTPRF-205ENST00000414879 PMVKQ15126 192 aa9.33□□□□□ -0.92
PTPRF-205ENST00000414879 TMEM243Q9BU79 118 aa9.33□□□□□ -0.92
PTPRF-205ENST00000414879 SMIM2Q9BVW6 85 aa9.33□□□□□ -0.92
PTPRF-205ENST00000414879 TIMM21Q9BVV7 248 aa9.32□□□□□ -0.92
PTPRF-205ENST00000414879 SRCAPQ6ZRS2 3230 aa9.32□□□□□ -0.92
PTPRF-205ENST00000414879 PTPRQQ9UMZ3 2332 aa9.32□□□□□ -0.92
PTPRF-205ENST00000414879 FREM1Q5H8C1 2179 aa9.32□□□□□ -0.92
PTPRF-205ENST00000414879 IGHV3-53P01767 116 aa9.32□□□□□ -0.92
PTPRF-205ENST00000414879 IGF1P05019 195 aa9.32□□□□□ -0.92
PTPRF-205ENST00000414879 GFI1BQ5VTD9 330 aa9.32□□□□□ -0.92
PTPRF-205ENST00000414879 C1orf159Q96HA4 380 aa9.32□□□□□ -0.92
PTPRF-205ENST00000414879 SPCS1Q9Y6A9 102 aa9.32□□□□□ -0.92
PTPRF-205ENST00000414879 C6orf226Q5I0X4 101 aa9.32□□□□□ -0.92
PTPRF-205ENST00000414879 BOD1L2Q8IYS8 172 aa9.32□□□□□ -0.92
PTPRF-205ENST00000414879 KLF12Q9Y4X4 402 aa9.32□□□□□ -0.92
PTPRF-205ENST00000414879 LINC00158P58513 81 aa9.31□□□□□ -0.92
PTPRF-205ENST00000414879 C11orf1Q9H5F2 150 aa9.31□□□□□ -0.92
PTPRF-205ENST00000414879 ZMAT4Q9H898 229 aa9.31□□□□□ -0.92
PTPRF-205ENST00000414879 PLCE1Q9P212 2302 aa9.31□□□□□ -0.92
PTPRF-205ENST00000414879 C9orf47Q6ZRZ4 202 aa9.31□□□□□ -0.92
PTPRF-205ENST00000414879 DYNAPQ8N1N2 210 aa9.31□□□□□ -0.92
PTPRF-205ENST00000414879 KNCNA6PVL3 124 aa9.31□□□□□ -0.92
PTPRF-205ENST00000414879 SSBP2P81877 361 aaPredicted RBP9.31□□□□□ -0.92
PTPRF-205ENST00000414879 ERG28Q9UKR5 140 aa9.31□□□□□ -0.92
PTPRF-205ENST00000414879 TRAV2A0A0B4J234 112 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 LGALS9BQ3B8N2 356 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 LGALS9CQ6DKI2 356 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms