RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 BTN1A1Q13410 526 aa10.51□□□□□ -0.73
LIMS1-206ENST00000414829 SAPCD1Q5SSQ6 148 aa10.51□□□□□ -0.73
LIMS1-206ENST00000414829 RNASE8Q8TDE3 154 aaKnown RBP10.51□□□□□ -0.73
LIMS1-206ENST00000414829 TREM1Q9NP99 234 aa10.51□□□□□ -0.73
LIMS1-206ENST00000414829 MANBALQ9NQG1 85 aa10.51□□□□□ -0.73
LIMS1-206ENST00000414829 TIMM8BQ9Y5J9 83 aaPredicted RBP10.51□□□□□ -0.73
LIMS1-206ENST00000414829 SNURFLB1AK76 121 aa10.5□□□□□ -0.73
LIMS1-206ENST00000414829 PEX7O00628 323 aa10.5□□□□□ -0.73
LIMS1-206ENST00000414829 FLI1Q01543 452 aaPredicted RBP10.5□□□□□ -0.73
LIMS1-206ENST00000414829 ANXA2RQ3ZCQ2 193 aa10.5□□□□□ -0.73
LIMS1-206ENST00000414829 FAM222AQ5U5X8 452 aa10.5□□□□□ -0.73
LIMS1-206ENST00000414829 CST9LP1Q5W188 147 aa10.5□□□□□ -0.73
LIMS1-206ENST00000414829 EIF4E3Q8N5X7 224 aaKnown RBP10.5□□□□□ -0.73
LIMS1-206ENST00000414829 TMPRSS5Q9H3S3 457 aa10.5□□□□□ -0.73
LIMS1-206ENST00000414829 TRAV21A0A0B4J279 112 aa10.49□□□□□ -0.73
LIMS1-206ENST00000414829 CBY3A6NI87 242 aa10.49□□□□□ -0.73
LIMS1-206ENST00000414829 ZNF324O75467 553 aaPredicted RBP10.49□□□□□ -0.73
LIMS1-206ENST00000414829 IFNA1P01562 189 aa10.49□□□□□ -0.73
LIMS1-206ENST00000414829 TAGLN2P37802 199 aaKnown RBP10.49□□□□□ -0.73
LIMS1-206ENST00000414829 DAD1P61803 113 aa10.49□□□□□ -0.73
LIMS1-206ENST00000414829 CD300CQ08708 224 aa10.49□□□□□ -0.73
LIMS1-206ENST00000414829 KIR3DS1Q14943 382 aa10.49□□□□□ -0.73
LIMS1-206ENST00000414829 IBA57Q5T440 356 aaKnown RBP10.49□□□□□ -0.73
LIMS1-206ENST00000414829 Q6AWC8 147 aa10.49□□□□□ -0.73
LIMS1-206ENST00000414829 C2CD4CQ8TF44 421 aa10.49□□□□□ -0.73
LIMS1-206ENST00000414829 TXNDC17Q9BRA2 123 aa10.49□□□□□ -0.73
LIMS1-206ENST00000414829 CELA1Q9UNI1 258 aa10.49□□□□□ -0.73
LIMS1-206ENST00000414829 IGHV1OR15-1A0A075B7D0 117 aa10.48□□□□□ -0.73
LIMS1-206ENST00000414829 TRAV8-1A0A0A6YYK1 113 aa10.48□□□□□ -0.73
LIMS1-206ENST00000414829 Q6ZTC4 211 aa10.48□□□□□ -0.73
LIMS1-206ENST00000414829 FMC1Q96HJ9 113 aa10.48□□□□□ -0.73
LIMS1-206ENST00000414829 PSG8Q9UQ74 426 aa10.48□□□□□ -0.73
LIMS1-206ENST00000414829 TRGV11A0A075B6L2 103 aa10.47□□□□□ -0.73
LIMS1-206ENST00000414829 PAGE4O60829 102 aa10.47□□□□□ -0.73
LIMS1-206ENST00000414829 S100A9P06702 114 aaKnown RBP10.47□□□□□ -0.73
LIMS1-206ENST00000414829 UBE2G1P62253 170 aa10.47□□□□□ -0.73
LIMS1-206ENST00000414829 DAZ2Q13117 558 aaKnown RBP10.47□□□□□ -0.73
LIMS1-206ENST00000414829 C12orf74Q32Q52 190 aa10.47□□□□□ -0.73
LIMS1-206ENST00000414829 SMUG1Q53HV7 270 aa10.47□□□□□ -0.73
LIMS1-206ENST00000414829 FAM159AQ6UWV7 190 aa10.47□□□□□ -0.73
LIMS1-206ENST00000414829 FAM210BQ96KR6 192 aa10.47□□□□□ -0.73
LIMS1-206ENST00000414829 PLA2G2EQ9NZK7 142 aa10.47□□□□□ -0.73
LIMS1-206ENST00000414829 AKR1C3P42330 323 aa10.46□□□□□ -0.73
LIMS1-206ENST00000414829 ZNF415Q09FC8 603 aa10.46□□□□□ -0.73
LIMS1-206ENST00000414829 PRNTQ86SH4 94 aa10.46□□□□□ -0.73
LIMS1-206ENST00000414829 KCNS1Q96KK3 526 aa10.46□□□□□ -0.73
LIMS1-206ENST00000414829 GNG13Q9P2W3 67 aa10.46□□□□□ -0.73
LIMS1-206ENST00000414829 ZFP30Q9Y2G7 519 aa10.46□□□□□ -0.73
LIMS1-206ENST00000414829 DNAH7Q8WXX0 4024 aa10.46□□□□□ -0.74
LIMS1-206ENST00000414829 DEFB131BA0A096LNP1 70 aa10.45□□□□□ -0.74
LIMS1-206ENST00000414829 TRBV6-1A0A0K0K1D8 114 aa10.45□□□□□ -0.74
LIMS1-206ENST00000414829 A0A1B0GV50 99 aa10.45□□□□□ -0.74
LIMS1-206ENST00000414829 PLAC8L1A1L4L8 177 aa10.45□□□□□ -0.74
LIMS1-206ENST00000414829 AZU1P20160 251 aa10.45□□□□□ -0.74
LIMS1-206ENST00000414829 BLOC1S1P78537 153 aa10.45□□□□□ -0.74
LIMS1-206ENST00000414829 TDRG1Q3Y452 100 aa10.45□□□□□ -0.74
LIMS1-206ENST00000414829 PRR9Q5T870 116 aa10.45□□□□□ -0.74
LIMS1-206ENST00000414829 Q86TA4 180 aa10.45□□□□□ -0.74
LIMS1-206ENST00000414829 NOP10Q9NPE3 64 aaKnown RBP10.45□□□□□ -0.74
LIMS1-206ENST00000414829 IGLV2-11P01706 119 aa10.44□□□□□ -0.74
LIMS1-206ENST00000414829 PFN1P07737 140 aaKnown RBP10.44□□□□□ -0.74
LIMS1-206ENST00000414829 ATP5G3P48201 142 aa10.44□□□□□ -0.74
LIMS1-206ENST00000414829 NKX2-5P52952 324 aaPredicted RBP10.44□□□□□ -0.74
LIMS1-206ENST00000414829 TCL1AP56279 114 aa10.44□□□□□ -0.74
LIMS1-206ENST00000414829 SDF2L1Q9HCN8 221 aa10.44□□□□□ -0.74
LIMS1-206ENST00000414829 KLF12Q9Y4X4 402 aa10.44□□□□□ -0.74
LIMS1-206ENST00000414829 PDE6DO43924 150 aa10.43□□□□□ -0.74
LIMS1-206ENST00000414829 ATP5G1P05496 136 aa10.43□□□□□ -0.74
LIMS1-206ENST00000414829 DEFB130BP0DP73 79 aa10.43□□□□□ -0.74
LIMS1-206ENST00000414829 DEFB130AP0DP74 79 aa10.43□□□□□ -0.74
LIMS1-206ENST00000414829 TMEM183BQ1AE95 376 aa10.43□□□□□ -0.74
LIMS1-206ENST00000414829 ALKAL2Q6UX46 152 aa10.43□□□□□ -0.74
LIMS1-206ENST00000414829 NAGKQ9UJ70 344 aa10.43□□□□□ -0.74
LIMS1-206ENST00000414829 GCGP01275 180 aa10.42□□□□□ -0.74
LIMS1-206ENST00000414829 LGALS9BQ3B8N2 356 aa10.42□□□□□ -0.74
LIMS1-206ENST00000414829 MUC21Q5SSG8 566 aa10.42□□□□□ -0.74
LIMS1-206ENST00000414829 TVP23CQ96ET8 276 aa10.42□□□□□ -0.74
LIMS1-206ENST00000414829 SGK494Q96LW2 274 aa10.42□□□□□ -0.74
LIMS1-206ENST00000414829 SPXQ9BT56 116 aa10.42□□□□□ -0.74
LIMS1-206ENST00000414829 GSN-AS1Q9NRJ2 163 aa10.42□□□□□ -0.74
LIMS1-206ENST00000414829 TRAV34A0A0B4J273 112 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 IGLL5B9A064 214 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 LTAP01374 205 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 PRM2P04554 102 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 BCL2P10415 239 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 MEF2BQ02080 365 aaPredicted RBP10.41□□□□□ -0.74
LIMS1-206ENST00000414829 ZNF767PQ75MW2 155 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 COX8CQ7Z4L0 72 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 LINC00612Q8N6U2 182 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 C11orf72Q8NBR9 251 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 C11orf52Q96A22 123 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 C18orf15Q96N68 181 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 NDUFAF3Q9BU61 184 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 TP53TG3Q9ULZ0 132 aa10.41□□□□□ -0.74
LIMS1-206ENST00000414829 TRGV2A0A075B6R0 118 aa10.4□□□□□ -0.74
LIMS1-206ENST00000414829 LCE6AA0A183 80 aa10.4□□□□□ -0.74
LIMS1-206ENST00000414829 SCO2A0A1W2PP80 73 aa10.4□□□□□ -0.74
LIMS1-206ENST00000414829 FABP5P3A8MUU1 101 aa10.4□□□□□ -0.74
LIMS1-206ENST00000414829 HTN3P15516 51 aa10.4□□□□□ -0.74
LIMS1-206ENST00000414829 TMEM183AQ8IXX5 376 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms