RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 IFNA5P01569 189 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 PRM2P04554 102 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 GIPP09681 153 aaPredicted RBP3.51□□□□□ -1.85
VPS41-205ENST00000414632 OR10J4P0C629 311 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 RBMY1A1P0DJD3 496 aaKnown RBP3.51□□□□□ -1.85
VPS41-205ENST00000414632 RBMY1CP0DJD4 496 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 IGLC2P0DOY2 106 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 S100A7P31151 101 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 RAB2AP61019 212 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 SSTP61278 116 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 RHOBP62745 196 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 PSG9Q00887 426 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 RBMY1FQ15415 496 aaKnown RBP3.51□□□□□ -1.85
VPS41-205ENST00000414632 SPINK13Q1W4C9 94 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 LCN15Q6UWW0 184 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 ZNF767PQ75MW2 155 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 S100A7AQ86SG5 101 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 ZNF575Q86XF7 245 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 EXOC3-AS1Q8N2X6 119 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 HSD17B11Q8NBQ5 300 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 CSNK1G2-AS1Q8NCQ2 148 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 OR2T35Q8NGX2 323 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 SCGB1C1Q8TD33 95 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 GATAD1Q8WUU5 269 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 RPUSD4Q96CM3 377 aaKnown RBP3.51□□□□□ -1.85
VPS41-205ENST00000414632 SLC25A2Q9BXI2 301 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 ZNF331Q9NQX6 463 aaPredicted RBP3.51□□□□□ -1.85
VPS41-205ENST00000414632 ZNF586Q9NXT0 402 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 HYDINQ4G0P3 5121 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 BIRC6Q9NR09 4857 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 VPS13DQ5THJ4 4388 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 RNF222A6NCQ9 220 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 F8WDY8 70 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 G3V3Q6 166 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 M0R3E3 92 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 ARPC5O15511 151 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 OR7C2O60412 319 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 CIDEAO60543 219 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 PFDN1O60925 122 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 EMP1P54849 157 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 PSG3Q16557 428 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 AMTNQ6UX39 209 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 BAP18Q8IXM2 172 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 STPG4Q8N801 248 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 Q8NAQ8 132 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 OR8A1Q8NGG7 326 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 PHYHIPLQ96FC7 376 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 FAM167A-AS1Q96KT0 104 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 AQP10Q96PS8 301 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 SLC50A1Q9BRV3 221 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 SH3BGRL3Q9H299 93 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 CELA1Q9UNI1 258 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 FUT9Q9Y231 359 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 TIMM9Q9Y5J7 89 aa3.5□□□□□ -1.85
VPS41-205ENST00000414632 TRBV19A0A075B6N1 114 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 A0A087WZ39 114 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 ZNF705EA8MWA4 302 aaPredicted RBP3.49□□□□□ -1.85
VPS41-205ENST00000414632 CRXO43186 299 aaPredicted RBP3.49□□□□□ -1.85
VPS41-205ENST00000414632 DUSP14O95147 198 aaKnown RBP3.49□□□□□ -1.85
VPS41-205ENST00000414632 INSP01308 110 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 HTN1P15515 57 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 ATP6V0CP27449 155 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 NUTF2P61970 127 aaKnown RBP3.49□□□□□ -1.85
VPS41-205ENST00000414632 UBE2L3P68036 154 aaKnown RBP3.49□□□□□ -1.85
VPS41-205ENST00000414632 ERCC8Q13216 396 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 SAMD13Q5VXD3 122 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 RPL7L1Q6DKI1 246 aaKnown RBP3.49□□□□□ -1.85
VPS41-205ENST00000414632 C1orf158Q8N1D5 194 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 INO80EQ8NBZ0 244 aaPredicted RBP3.49□□□□□ -1.85
VPS41-205ENST00000414632 C11orf45Q8TAV5 145 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 FXYD5Q96DB9 178 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 TMEM208Q9BTX3 173 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 PAXXQ9BUH6 204 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 MRPL32Q9BYC8 188 aaKnown RBP3.49□□□□□ -1.85
VPS41-205ENST00000414632 OR51M1Q9H341 326 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 C11orf68Q9H3H3 251 aaKnown RBP3.49□□□□□ -1.85
VPS41-205ENST00000414632 KCNIP2Q9NS61 270 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 TMEM14CQ9P0S9 112 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 RPH3ALQ9UNE2 315 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 TNFSF18Q9UNG2 199 aa3.49□□□□□ -1.85
VPS41-205ENST00000414632 IGKV2-40A0A087WW87 121 aaPredicted RBP3.48□□□□□ -1.85
VPS41-205ENST00000414632 A8MTW9 85 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 ZNF705GA8MUZ8 300 aaPredicted RBP3.48□□□□□ -1.85
VPS41-205ENST00000414632 IGKV2D-40P01614 121 aaPredicted RBP3.48□□□□□ -1.85
VPS41-205ENST00000414632 NBEAP1P0C6P0 100 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 CT45A10P0DMU9 189 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 HIST1H1EP10412 219 aaKnown RBP3.48□□□□□ -1.85
VPS41-205ENST00000414632 MIFP14174 115 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 CXCL2P19875 107 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 RANP62826 216 aaKnown RBP3.48□□□□□ -1.85
VPS41-205ENST00000414632 CD300CQ08708 224 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 SRSF9Q13242 221 aaKnown RBP eCLIP3.48□□□□□ -1.85
VPS41-205ENST00000414632 ZNF266Q14584 549 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 GUK1Q16774 197 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 ACOT6Q3I5F7 207 aaPredicted RBP3.48□□□□□ -1.85
VPS41-205ENST00000414632 KIAA1644Q3SXP7 199 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 KHDC3LQ587J8 217 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 TMEM41BQ5BJD5 291 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 FAM159AQ6UWV7 190 aa3.48□□□□□ -1.85
VPS41-205ENST00000414632 ZNF705AQ6ZN79 300 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms