RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 TMEM88Q6PEY1 159 aa9.28□□□□□ -0.92
SSB-203ENST00000413002 hCG_2014768A0A024R1R8 64 aa9.27□□□□□ -0.93
SSB-203ENST00000413002 SNURFLB1AK76 121 aa9.27□□□□□ -0.93
SSB-203ENST00000413002 RGS13O14921 159 aa9.27□□□□□ -0.93
SSB-203ENST00000413002 FHITP49789 147 aa9.27□□□□□ -0.93
SSB-203ENST00000413002 UBE2G2P60604 165 aa9.27□□□□□ -0.93
SSB-203ENST00000413002 SUMO1P63165 101 aaKnown RBP9.27□□□□□ -0.93
SSB-203ENST00000413002 EIF4E3Q8N5X7 224 aaKnown RBP9.27□□□□□ -0.93
SSB-203ENST00000413002 SUN5Q8TC36 379 aa9.27□□□□□ -0.93
SSB-203ENST00000413002 TVP23CQ96ET8 276 aa9.27□□□□□ -0.93
SSB-203ENST00000413002 ST6GAL2Q96JF0 529 aa9.27□□□□□ -0.93
SSB-203ENST00000413002 KLF12Q9Y4X4 402 aa9.27□□□□□ -0.93
SSB-203ENST00000413002 VPS13DQ5THJ4 4388 aa9.26□□□□□ -0.93
SSB-203ENST00000413002 IGHV1OR15-1A0A075B7D0 117 aa9.26□□□□□ -0.93
SSB-203ENST00000413002 CTXND1A0A1B0GTU2 59 aa9.26□□□□□ -0.93
SSB-203ENST00000413002 HMSDA8MTL9 139 aa9.26□□□□□ -0.93
SSB-203ENST00000413002 GGTLC3B5MD39 225 aa9.26□□□□□ -0.93
SSB-203ENST00000413002 F6UZH7 168 aa9.26□□□□□ -0.93
SSB-203ENST00000413002 NMBP08949 121 aa9.26□□□□□ -0.93
SSB-203ENST00000413002 ZNF345Q14585 488 aa9.26□□□□□ -0.93
SSB-203ENST00000413002 Q6ZNX1 250 aa9.26□□□□□ -0.93
SSB-203ENST00000413002 Q6ZTI0 123 aa9.26□□□□□ -0.93
SSB-203ENST00000413002 C11orf72Q8NBR9 251 aa9.26□□□□□ -0.93
SSB-203ENST00000413002 ZNF471Q9BX82 626 aaPredicted RBP9.26□□□□□ -0.93
SSB-203ENST00000413002 TMEM167BQ9NRX6 74 aa9.26□□□□□ -0.93
SSB-203ENST00000413002 BCL2L11O43521 198 aa9.25□□□□□ -0.93
SSB-203ENST00000413002 TCRAP04437 139 aa9.25□□□□□ -0.93
SSB-203ENST00000413002 ATP5G1P05496 136 aa9.25□□□□□ -0.93
SSB-203ENST00000413002 ATP5G3P48201 142 aa9.25□□□□□ -0.93
SSB-203ENST00000413002 C5orf17Q8NAS9 161 aa9.25□□□□□ -0.93
SSB-203ENST00000413002 A0A0D9SG52 128 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 TRBV7-9A0A0J9YWB2 115 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 A0A1B0GV50 99 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 KANTRA0A1W2PQU2 76 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 MAP1LC3B2A6NCE7 125 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 OR5I1Q13606 314 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 ANXA2RQ3ZCQ2 193 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 TMUB2Q71RG4 321 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 LINC00612Q8N6U2 182 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 LINC00479Q96M42 142 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 C8orf49Q96NF6 230 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 LINC00467Q9BRT7 94 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 MAP1LC3BQ9GZQ8 125 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 TREM1Q9NP99 234 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 NAGKQ9UJ70 344 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 EPDR1Q9UM22 224 aa9.24□□□□□ -0.93
SSB-203ENST00000413002 TRGV1A0A0A0MS02 117 aa9.23□□□□□ -0.93
SSB-203ENST00000413002 TRAV34A0A0B4J273 112 aa9.23□□□□□ -0.93
SSB-203ENST00000413002 PFDN1O60925 122 aa9.23□□□□□ -0.93
SSB-203ENST00000413002 HOXA5P20719 270 aa9.23□□□□□ -0.93
SSB-203ENST00000413002 DAZ2Q13117 558 aaKnown RBP9.23□□□□□ -0.93
SSB-203ENST00000413002 Q6AWC8 147 aa9.23□□□□□ -0.93
SSB-203ENST00000413002 ZNF680Q8NEM1 530 aa9.23□□□□□ -0.93
SSB-203ENST00000413002 TMED6Q8WW62 240 aa9.23□□□□□ -0.93
SSB-203ENST00000413002 MRPL16Q9NX20 251 aaKnown RBP9.23□□□□□ -0.93
SSB-203ENST00000413002 MDFICQ9P1T7 246 aa9.23□□□□□ -0.93
SSB-203ENST00000413002 LENEPQ9Y5L5 61 aa9.23□□□□□ -0.93
SSB-203ENST00000413002 EPPK1P58107 5090 aaKnown RBP9.23□□□□□ -0.93
SSB-203ENST00000413002 KMT2AQ03164 3969 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 A0A0J9YY99 117 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 A0A1W2PRE2 83 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 GNRH2O43555 120 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 NUDT3O95989 172 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 IFNA7P01567 189 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 IGLV2-11P01706 119 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 TCL1AP56279 114 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 TMEM183BQ1AE95 376 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 PRNTQ86SH4 94 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 TMEM183AQ8IXX5 376 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 ARL6IP6Q8N6S5 226 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 FAM213BQ8TBF2 198 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 FAM210BQ96KR6 192 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 PSG8Q9UQ74 426 aa9.22□□□□□ -0.93
SSB-203ENST00000413002 TRGV2A0A075B6R0 118 aa9.21□□□□□ -0.94
SSB-203ENST00000413002 FAM74A7A6NL05 159 aa9.21□□□□□ -0.94
SSB-203ENST00000413002 IGHV3-53P01767 116 aa9.21□□□□□ -0.94
SSB-203ENST00000413002 SEC11BP0C7V7 166 aa9.21□□□□□ -0.94
SSB-203ENST00000413002 P0DMU3 169 aa9.21□□□□□ -0.94
SSB-203ENST00000413002 FAM231AP0DMU4 169 aa9.21□□□□□ -0.94
SSB-203ENST00000413002 FAM231CP0DMU5 169 aa9.21□□□□□ -0.94
SSB-203ENST00000413002 ZNF80P51504 273 aaPredicted RBP9.21□□□□□ -0.94
SSB-203ENST00000413002 FLI1Q01543 452 aaPredicted RBP9.21□□□□□ -0.94
SSB-203ENST00000413002 LGALSLQ3ZCW2 172 aaPredicted RBP9.21□□□□□ -0.94
SSB-203ENST00000413002 FAM159AQ6UWV7 190 aa9.21□□□□□ -0.94
SSB-203ENST00000413002 UBE2DNLQ8IWF7 75 aa9.21□□□□□ -0.94
SSB-203ENST00000413002 POM121L12Q8N7R1 296 aa9.21□□□□□ -0.94
SSB-203ENST00000413002 CYB561D1Q8N8Q1 229 aa9.21□□□□□ -0.94
SSB-203ENST00000413002 TRAV26-1A0A087WT03 109 aa9.2□□□□□ -0.94
SSB-203ENST00000413002 K7EQM0 130 aa9.2□□□□□ -0.94
SSB-203ENST00000413002 M0R2N4 97 aa9.2□□□□□ -0.94
SSB-203ENST00000413002 SPINK4O60575 86 aa9.2□□□□□ -0.94
SSB-203ENST00000413002 IBA57Q5T440 356 aaKnown RBP9.2□□□□□ -0.94
SSB-203ENST00000413002 TCTE3Q8IZS6 198 aa9.2□□□□□ -0.94
SSB-203ENST00000413002 SFT2D1Q8WV19 159 aa9.2□□□□□ -0.94
SSB-203ENST00000413002 ATG101Q9BSB4 218 aa9.2□□□□□ -0.94
SSB-203ENST00000413002 NDFIP1Q9BT67 221 aa9.2□□□□□ -0.94
SSB-203ENST00000413002 C11orf21Q9P2W6 132 aa9.2□□□□□ -0.94
SSB-203ENST00000413002 IGLV2-18A0A075B6J9 118 aa9.19□□□□□ -0.94
SSB-203ENST00000413002 TRAV21A0A0B4J279 112 aa9.19□□□□□ -0.94
SSB-203ENST00000413002 SERTM2A0A1B0GWG4 89 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 201.6 ms