RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 RNASE8Q8TDE3 154 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-207ENST00000409417 ATG101Q9BSB4 218 aa14.18□□□□□ -0.14
PDLIM2-207ENST00000409417 IFNA7P01567 189 aa14.17□□□□□ -0.14
PDLIM2-207ENST00000409417 CYB561D1Q8N8Q1 229 aa14.17□□□□□ -0.14
PDLIM2-207ENST00000409417 LINC00467Q9BRT7 94 aa14.17□□□□□ -0.14
PDLIM2-207ENST00000409417 ARL2-SNX15V9GYD0 113 aa14.17□□□□□ -0.14
PDLIM2-207ENST00000409417 LYRM9A8MSI8 78 aa14.16□□□□□ -0.14
PDLIM2-207ENST00000409417 ZNF767PQ75MW2 155 aa14.16□□□□□ -0.14
PDLIM2-207ENST00000409417 IGLV2-11P01706 119 aa14.15□□□□□ -0.14
PDLIM2-207ENST00000409417 SULT1A2P50226 295 aa14.15□□□□□ -0.14
PDLIM2-207ENST00000409417 TVP23CQ96ET8 276 aa14.15□□□□□ -0.14
PDLIM2-207ENST00000409417 TIMM8BQ9Y5J9 83 aaPredicted RBP14.15□□□□□ -0.14
PDLIM2-207ENST00000409417 TRAV10A0A0B4J240 114 aa14.14□□□□□ -0.15
PDLIM2-207ENST00000409417 TRAV1-1A0A0B4J248 108 aa14.14□□□□□ -0.15
PDLIM2-207ENST00000409417 FBLL1A6NHQ2 334 aaKnown RBP14.14□□□□□ -0.15
PDLIM2-207ENST00000409417 Q6AWC8 147 aa14.14□□□□□ -0.15
PDLIM2-207ENST00000409417 Q6ZQT7 251 aa14.14□□□□□ -0.15
PDLIM2-207ENST00000409417 TMEM75Q8N9X5 138 aa14.14□□□□□ -0.15
PDLIM2-207ENST00000409417 HIST1H2BAQ96A08 127 aa14.14□□□□□ -0.15
PDLIM2-207ENST00000409417 SGK494Q96LW2 274 aa14.14□□□□□ -0.15
PDLIM2-207ENST00000409417 TREM1Q9NP99 234 aa14.14□□□□□ -0.15
PDLIM2-207ENST00000409417 A0A1B0GV50 99 aa14.13□□□□□ -0.15
PDLIM2-207ENST00000409417 RGS13O14921 159 aa14.13□□□□□ -0.15
PDLIM2-207ENST00000409417 NKX2-5P52952 324 aaPredicted RBP14.13□□□□□ -0.15
PDLIM2-207ENST00000409417 FLI1Q01543 452 aaPredicted RBP14.13□□□□□ -0.15
PDLIM2-207ENST00000409417 ANXA2RQ3ZCQ2 193 aa14.13□□□□□ -0.15
PDLIM2-207ENST00000409417 CST9LP1Q5W188 147 aa14.13□□□□□ -0.15
PDLIM2-207ENST00000409417 EIF4E3Q8N5X7 224 aaKnown RBP14.13□□□□□ -0.15
PDLIM2-207ENST00000409417 C2CD4CQ8TF44 421 aa14.13□□□□□ -0.15
PDLIM2-207ENST00000409417 TCEAL7Q9BRU2 100 aa14.13□□□□□ -0.15
PDLIM2-207ENST00000409417 NDFIP1Q9BT67 221 aa14.13□□□□□ -0.15
PDLIM2-207ENST00000409417 PSG8Q9UQ74 426 aa14.13□□□□□ -0.15
PDLIM2-207ENST00000409417 PEX7O00628 323 aa14.12□□□□□ -0.15
PDLIM2-207ENST00000409417 PPT1P50897 306 aa14.12□□□□□ -0.15
PDLIM2-207ENST00000409417 ZNF680Q8NEM1 530 aa14.12□□□□□ -0.15
PDLIM2-207ENST00000409417 IGHV1OR15-1A0A075B7D0 117 aa14.12□□□□□ -0.15
PDLIM2-207ENST00000409417 CBY3A6NI87 242 aa14.12□□□□□ -0.15
PDLIM2-207ENST00000409417 PAGE4O60829 102 aa14.12□□□□□ -0.15
PDLIM2-207ENST00000409417 DAD1P61803 113 aa14.12□□□□□ -0.15
PDLIM2-207ENST00000409417 LINC00479Q96M42 142 aa14.12□□□□□ -0.15
PDLIM2-207ENST00000409417 NOP10Q9NPE3 64 aaKnown RBP14.12□□□□□ -0.15
PDLIM2-207ENST00000409417 DEFB131BA0A096LNP1 70 aa14.11□□□□□ -0.15
PDLIM2-207ENST00000409417 F6UZH7 168 aa14.11□□□□□ -0.15
PDLIM2-207ENST00000409417 PRNTQ86SH4 94 aa14.11□□□□□ -0.15
PDLIM2-207ENST00000409417 SNURFLB1AK76 121 aa14.1□□□□□ -0.15
PDLIM2-207ENST00000409417 TEX46H3BTG2 121 aa14.1□□□□□ -0.15
PDLIM2-207ENST00000409417 DEFB130BP0DP73 79 aa14.1□□□□□ -0.15
PDLIM2-207ENST00000409417 DEFB130AP0DP74 79 aa14.1□□□□□ -0.15
PDLIM2-207ENST00000409417 ATP5G3P48201 142 aa14.1□□□□□ -0.15
PDLIM2-207ENST00000409417 SAPCD1Q5SSQ6 148 aa14.1□□□□□ -0.15
PDLIM2-207ENST00000409417 C11orf72Q8NBR9 251 aa14.1□□□□□ -0.15
PDLIM2-207ENST00000409417 PLECQ15149 4684 aaKnown RBP14.1□□□□□ -0.15
PDLIM2-207ENST00000409417 TRAV34A0A0B4J273 112 aa14.09□□□□□ -0.15
PDLIM2-207ENST00000409417 CCL20P78556 96 aa14.09□□□□□ -0.15
PDLIM2-207ENST00000409417 DAZ2Q13117 558 aaKnown RBP14.09□□□□□ -0.15
PDLIM2-207ENST00000409417 GSN-AS1Q9NRJ2 163 aa14.09□□□□□ -0.15
PDLIM2-207ENST00000409417 DYNC2H1Q8NCM8 4307 aaKnown RBP14.09□□□□□ -0.15
PDLIM2-207ENST00000409417 TRAV21A0A0B4J279 112 aa14.08□□□□□ -0.16
PDLIM2-207ENST00000409417 TCTAP57738 103 aa14.08□□□□□ -0.16
PDLIM2-207ENST00000409417 MUC21Q5SSG8 566 aa14.08□□□□□ -0.16
PDLIM2-207ENST00000409417 C8orf49Q96NF6 230 aa14.08□□□□□ -0.16
PDLIM2-207ENST00000409417 TP53TG3Q9ULZ0 132 aa14.08□□□□□ -0.16
PDLIM2-207ENST00000409417 KLF12Q9Y4X4 402 aa14.08□□□□□ -0.16
PDLIM2-207ENST00000409417 LCE6AA0A183 80 aa14.07□□□□□ -0.16
PDLIM2-207ENST00000409417 IGLL5B9A064 214 aa14.07□□□□□ -0.16
PDLIM2-207ENST00000409417 TDRG1Q3Y452 100 aa14.07□□□□□ -0.16
PDLIM2-207ENST00000409417 IBA57Q5T440 356 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-207ENST00000409417 FAM159AQ6UWV7 190 aa14.07□□□□□ -0.16
PDLIM2-207ENST00000409417 LINC00612Q8N6U2 182 aa14.07□□□□□ -0.16
PDLIM2-207ENST00000409417 MANBALQ9NQG1 85 aa14.07□□□□□ -0.16
PDLIM2-207ENST00000409417 BOLA1Q9Y3E2 137 aa14.07□□□□□ -0.16
PDLIM2-207ENST00000409417 SMUG1Q53HV7 270 aa14.06□□□□□ -0.16
PDLIM2-207ENST00000409417 FMC1Q96HJ9 113 aa14.06□□□□□ -0.16
PDLIM2-207ENST00000409417 GNG13Q9P2W3 67 aa14.06□□□□□ -0.16
PDLIM2-207ENST00000409417 GCGP01275 180 aa14.06□□□□□ -0.16
PDLIM2-207ENST00000409417 TCL1AP56279 114 aa14.06□□□□□ -0.16
PDLIM2-207ENST00000409417 ALKAL2Q6UX46 152 aa14.06□□□□□ -0.16
PDLIM2-207ENST00000409417 Q86TA4 180 aa14.06□□□□□ -0.16
PDLIM2-207ENST00000409417 NAGKQ9UJ70 344 aa14.06□□□□□ -0.16
PDLIM2-207ENST00000409417 PFN1P07737 140 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-207ENST00000409417 HTN3P15516 51 aa14.05□□□□□ -0.16
PDLIM2-207ENST00000409417 ZNF80P51504 273 aaPredicted RBP14.05□□□□□ -0.16
PDLIM2-207ENST00000409417 ZFP30Q9Y2G7 519 aa14.05□□□□□ -0.16
PDLIM2-207ENST00000409417 IGHV4-4A0A075B6R2 117 aa14.04□□□□□ -0.16
PDLIM2-207ENST00000409417 TRBV6-1A0A0K0K1D8 114 aa14.04□□□□□ -0.16
PDLIM2-207ENST00000409417 AKR1C3P42330 323 aa14.04□□□□□ -0.16
PDLIM2-207ENST00000409417 UBE2G1P62253 170 aa14.04□□□□□ -0.16
PDLIM2-207ENST00000409417 TMEM183BQ1AE95 376 aa14.04□□□□□ -0.16
PDLIM2-207ENST00000409417 TMEM183AQ8IXX5 376 aa14.04□□□□□ -0.16
PDLIM2-207ENST00000409417 FAM210BQ96KR6 192 aa14.04□□□□□ -0.16
PDLIM2-207ENST00000409417 TRGV11A0A075B6L2 103 aa14.03□□□□□ -0.16
PDLIM2-207ENST00000409417 ATP5G1P05496 136 aa14.03□□□□□ -0.16
PDLIM2-207ENST00000409417 ZNF415Q09FC8 603 aa14.03□□□□□ -0.16
PDLIM2-207ENST00000409417 Q6ZTI0 123 aa14.03□□□□□ -0.16
PDLIM2-207ENST00000409417 KCNS1Q96KK3 526 aa14.03□□□□□ -0.16
PDLIM2-207ENST00000409417 TXNDC17Q9BRA2 123 aa14.03□□□□□ -0.16
PDLIM2-207ENST00000409417 MDFICQ9P1T7 246 aa14.03□□□□□ -0.16
PDLIM2-207ENST00000409417 APLNQ9ULZ1 77 aa14.03□□□□□ -0.16
PDLIM2-207ENST00000409417 SCO2A0A1W2PP80 73 aa14.02□□□□□ -0.16
PDLIM2-207ENST00000409417 GAGE12BA1L429 117 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms