RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 WIPF3A6NGB9 483 aa10.3□□□□□ -0.76
RNF43-201ENST00000407977 KNCNA6PVL3 124 aa10.3□□□□□ -0.76
RNF43-201ENST00000407977 PRSS47A8MTI9 375 aa10.3□□□□□ -0.76
RNF43-201ENST00000407977 ZNRD1Q9P1U0 126 aa10.3□□□□□ -0.76
RNF43-201ENST00000407977 IGLL5B9A064 214 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 ZNF134P52741 427 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 FOXI2Q6ZQN5 318 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 B5MCH6 92 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 HOXD3P31249 432 aaPredicted RBP10.29□□□□□ -0.76
RNF43-201ENST00000407977 DOCK9Q9BZ29 2069 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 TCTEX1D4Q5JR98 221 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 FAM120AOSQ5T036 256 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 CDPF1Q6NVV7 123 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 ZNF491Q8N8L2 437 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 LINC01356Q8N9X3 169 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 SCRT2Q9NQ03 307 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 HIGD1BQ9P298 99 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 TEX48A0A1B0GUV7 120 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 PTPRDP23468 1912 aa10.29□□□□□ -0.76
RNF43-201ENST00000407977 DEFB130BP0DP73 79 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 DEFB130AP0DP74 79 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 HERV-K104P63124 156 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 Q6ZVH6 145 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 ZNRF2Q8NHG8 242 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 PHF3Q92576 2039 aaKnown RBP10.28□□□□□ -0.76
RNF43-201ENST00000407977 ANK1P16157 1881 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 SIP14410 1827 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 ARTNQ5T4W7 220 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 BPESC1Q9GZL8 116 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 RNF114Q9Y508 228 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 IGLV1-44P01699 117 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 PCP2Q8IVA1 136 aa10.28□□□□□ -0.76
RNF43-201ENST00000407977 NKAPP1Q8N9T2 125 aa10.27□□□□□ -0.76
RNF43-201ENST00000407977 CITED2Q99967 270 aaPredicted RBP10.27□□□□□ -0.76
RNF43-201ENST00000407977 KLK9Q9UKQ9 250 aa10.27□□□□□ -0.76
RNF43-201ENST00000407977 SCN5AQ14524 2016 aa10.27□□□□□ -0.76
RNF43-201ENST00000407977 IGLV3-9A0A075B6K5 115 aa10.27□□□□□ -0.77
RNF43-201ENST00000407977 CEACAM8P31997 349 aaPredicted RBP10.27□□□□□ -0.77
RNF43-201ENST00000407977 IGHV1-69P01742 117 aa10.27□□□□□ -0.77
RNF43-201ENST00000407977 KAAG1Q9UBP8 84 aa10.27□□□□□ -0.77
RNF43-201ENST00000407977 LINC01619G3V211 115 aa10.27□□□□□ -0.77
RNF43-201ENST00000407977 H3BUA1 57 aa10.27□□□□□ -0.77
RNF43-201ENST00000407977 UBE2DNLQ8IWF7 75 aa10.27□□□□□ -0.77
RNF43-201ENST00000407977 HEATR1Q9H583 2144 aaKnown RBP10.27□□□□□ -0.77
RNF43-201ENST00000407977 TEN1Q86WV5 123 aa10.26□□□□□ -0.77
RNF43-201ENST00000407977 XCL2Q9UBD3 114 aa10.26□□□□□ -0.77
RNF43-201ENST00000407977 BAALC-AS2P0C853 105 aa10.26□□□□□ -0.77
RNF43-201ENST00000407977 RBM3P98179 157 aaKnown RBP10.26□□□□□ -0.77
RNF43-201ENST00000407977 PROK2Q9HC23 129 aa10.26□□□□□ -0.77
RNF43-201ENST00000407977 MYO7BQ6PIF6 2116 aa10.26□□□□□ -0.77
RNF43-201ENST00000407977 ORMDL1Q9P0S3 153 aa10.25□□□□□ -0.77
RNF43-201ENST00000407977 CNOT1A5YKK6 2376 aaKnown RBP10.25□□□□□ -0.77
RNF43-201ENST00000407977 ATOX1O00244 68 aa10.25□□□□□ -0.77
RNF43-201ENST00000407977 PSCAO43653 123 aa10.25□□□□□ -0.77
RNF43-201ENST00000407977 MSMBP08118 114 aa10.25□□□□□ -0.77
RNF43-201ENST00000407977 G3V318 75 aa10.25□□□□□ -0.77
RNF43-201ENST00000407977 EGR2P11161 476 aaPredicted RBP10.25□□□□□ -0.77
RNF43-201ENST00000407977 MRAPQ8TCY5 172 aa10.25□□□□□ -0.77
RNF43-201ENST00000407977 ROS1P08922 2347 aa10.25□□□□□ -0.77
RNF43-201ENST00000407977 IGHV7-4-1A0A0J9YVY3 117 aa10.25□□□□□ -0.77
RNF43-201ENST00000407977 H0YGX0 51 aa10.24□□□□□ -0.77
RNF43-201ENST00000407977 IGHV3-16A0A0C4DH30 117 aa10.24□□□□□ -0.77
RNF43-201ENST00000407977 CFHR4Q92496 578 aa10.24□□□□□ -0.77
RNF43-201ENST00000407977 TPSG1Q9NRR2 321 aa10.24□□□□□ -0.77
RNF43-201ENST00000407977 PLXNA3P51805 1871 aa10.24□□□□□ -0.77
RNF43-201ENST00000407977 NXPH4O95158 308 aa10.23□□□□□ -0.77
RNF43-201ENST00000407977 SH2D6Q7Z4S9 175 aa10.23□□□□□ -0.77
RNF43-201ENST00000407977 AGPAT4-IT1Q9H0P7 198 aa10.23□□□□□ -0.77
RNF43-201ENST00000407977 Q6ZSR3 168 aa10.23□□□□□ -0.77
RNF43-201ENST00000407977 SS18L2Q9UHA2 77 aa10.23□□□□□ -0.77
RNF43-201ENST00000407977 CREBBPQ92793 2442 aa10.23□□□□□ -0.77
RNF43-201ENST00000407977 TRAV25A0A0B4J276 109 aa10.23□□□□□ -0.77
RNF43-201ENST00000407977 H3BQ85 93 aa10.23□□□□□ -0.77
RNF43-201ENST00000407977 DAD1P61803 113 aa10.23□□□□□ -0.77
RNF43-201ENST00000407977 SLC25A29Q8N8R3 303 aa10.23□□□□□ -0.77
RNF43-201ENST00000407977 ANKRD39Q53RE8 183 aa10.22□□□□□ -0.77
RNF43-201ENST00000407977 TRAV12-1A0A0B4J245 112 aa10.22□□□□□ -0.77
RNF43-201ENST00000407977 TINCRA0A1B0GVN0 87 aa10.22□□□□□ -0.77
RNF43-201ENST00000407977 SBF1O95248 1867 aa10.22□□□□□ -0.77
RNF43-201ENST00000407977 A0A0B4J2C4 111 aa10.22□□□□□ -0.77
RNF43-201ENST00000407977 CR1LQ2VPA4 569 aa10.22□□□□□ -0.77
RNF43-201ENST00000407977 RNASE8Q8TDE3 154 aaKnown RBP10.22□□□□□ -0.77
RNF43-201ENST00000407977 NUPR1O60356 82 aa10.22□□□□□ -0.77
RNF43-201ENST00000407977 DYNAPQ8N1N2 210 aa10.22□□□□□ -0.77
RNF43-201ENST00000407977 IGFL3Q6UXB1 125 aa10.21□□□□□ -0.77
RNF43-201ENST00000407977 ARFGEF3Q5TH69 2177 aa10.21□□□□□ -0.77
RNF43-201ENST00000407977 IGHV3-38A0A0C4DH36 116 aa10.21□□□□□ -0.77
RNF43-201ENST00000407977 ATP6V0E2Q8NHE4 81 aa10.21□□□□□ -0.77
RNF43-201ENST00000407977 FER1L5A0AVI2 2057 aa10.21□□□□□ -0.78
RNF43-201ENST00000407977 LY6HO94772 140 aa10.21□□□□□ -0.78
RNF43-201ENST00000407977 IGF2BP2-AS1Q96M15 143 aa10.21□□□□□ -0.78
RNF43-201ENST00000407977 ZNF503-AS2A6NEH8 195 aa10.21□□□□□ -0.78
RNF43-201ENST00000407977 ZNF524Q96C55 264 aa10.21□□□□□ -0.78
RNF43-201ENST00000407977 Q9H8V8 135 aa10.21□□□□□ -0.78
RNF43-201ENST00000407977 TAX1BP3O14907 124 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 ELANEP08246 267 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 GP9P14770 177 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 TRAV12-2A0A075B6T6 113 aa10.2□□□□□ -0.78
RNF43-201ENST00000407977 DUX4L9Q6RFH8 374 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms