RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 GGTLC3B5MD39 225 aa9.95□□□□□ -0.82
HLA-DQB1-202ENST00000399079 TVP23CQ96ET8 276 aa9.95□□□□□ -0.82
HLA-DQB1-202ENST00000399079 ZNF471Q9BX82 626 aaPredicted RBP9.95□□□□□ -0.82
HLA-DQB1-202ENST00000399079 RGS13O14921 159 aa9.94□□□□□ -0.82
HLA-DQB1-202ENST00000399079 BCL2L11O43521 198 aa9.94□□□□□ -0.82
HLA-DQB1-202ENST00000399079 EIF4E3Q8N5X7 224 aaKnown RBP9.94□□□□□ -0.82
HLA-DQB1-202ENST00000399079 ARL6IP6Q8N6S5 226 aa9.94□□□□□ -0.82
HLA-DQB1-202ENST00000399079 C5orf17Q8NAS9 161 aa9.94□□□□□ -0.82
HLA-DQB1-202ENST00000399079 C11orf72Q8NBR9 251 aa9.94□□□□□ -0.82
HLA-DQB1-202ENST00000399079 TMED6Q8WW62 240 aa9.94□□□□□ -0.82
HLA-DQB1-202ENST00000399079 LINC00467Q9BRT7 94 aa9.94□□□□□ -0.82
HLA-DQB1-202ENST00000399079 hCG_2014768A0A024R1R8 64 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 IGHV1OR15-1A0A075B7D0 117 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 KANTRA0A1W2PQU2 76 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 GAGE12BA1L429 117 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 GAGE7O76087 117 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 TCRAP04437 139 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 GAGE12FP0CL80 117 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 GAGE12GP0CL81 117 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 GAGE12IP0CL82 117 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 UBE2G2P60604 165 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 ANXA2RQ3ZCQ2 193 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 MUC21Q5SSG8 566 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 TMEM88Q6PEY1 159 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 TMUB2Q71RG4 321 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 LENEPQ9Y5L5 61 aa9.93□□□□□ -0.82
HLA-DQB1-202ENST00000399079 MAP1LC3B2A6NCE7 125 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 F5H768 121 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 F6UZH7 168 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 ATP5G1P05496 136 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 ATP5G3P48201 142 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 Q6AWC8 147 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 Q6ZTI0 123 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 LINC00612Q8N6U2 182 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 MAP1LC3BQ9GZQ8 125 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 EPDR1Q9UM22 224 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 KLF12Q9Y4X4 402 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 VPS13DQ5THJ4 4388 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 A0A1W2PRE2 83 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 PFDN1O60925 122 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 SEC11BP0C7V7 166 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 DAZ2Q13117 558 aaKnown RBP9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 TCTE3Q8IZS6 198 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 ZNF680Q8NEM1 530 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 FAM210BQ96KR6 192 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 TREM1Q9NP99 234 aa9.92□□□□□ -0.82
HLA-DQB1-202ENST00000399079 IGLV2-11P01706 119 aa9.91□□□□□ -0.82
HLA-DQB1-202ENST00000399079 LGALSLQ3ZCW2 172 aaPredicted RBP9.91□□□□□ -0.82
HLA-DQB1-202ENST00000399079 LINC00479Q96M42 142 aa9.91□□□□□ -0.82
HLA-DQB1-202ENST00000399079 SERTM2A0A1B0GWG4 89 aa9.9□□□□□ -0.82
HLA-DQB1-202ENST00000399079 FAM74A7A6NL05 159 aa9.9□□□□□ -0.82
HLA-DQB1-202ENST00000399079 TCL1AP56279 114 aa9.9□□□□□ -0.82
HLA-DQB1-202ENST00000399079 IBA57Q5T440 356 aaKnown RBP9.9□□□□□ -0.82
HLA-DQB1-202ENST00000399079 CYB561D1Q8N8Q1 229 aa9.9□□□□□ -0.82
HLA-DQB1-202ENST00000399079 FAM213BQ8TBF2 198 aa9.9□□□□□ -0.82
HLA-DQB1-202ENST00000399079 C8orf49Q96NF6 230 aa9.9□□□□□ -0.82
HLA-DQB1-202ENST00000399079 NAGKQ9UJ70 344 aa9.9□□□□□ -0.82
HLA-DQB1-202ENST00000399079 TRGV1A0A0A0MS02 117 aa9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 TRAV34A0A0B4J273 112 aa9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 A0A1B0GV50 99 aa9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 K7EQM0 130 aa9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 IFNA7P01567 189 aa9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 FLI1Q01543 452 aaPredicted RBP9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 OR5I1Q13606 314 aa9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 FAM159AQ6UWV7 190 aa9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 PRNTQ86SH4 94 aa9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 SFT2D1Q8WV19 159 aa9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 ATG101Q9BSB4 218 aa9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 MDFICQ9P1T7 246 aa9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 PSG8Q9UQ74 426 aa9.89□□□□□ -0.83
HLA-DQB1-202ENST00000399079 UMAD1C9J7I0 102 aa9.88□□□□□ -0.83
HLA-DQB1-202ENST00000399079 P0DMU3 169 aa9.88□□□□□ -0.83
HLA-DQB1-202ENST00000399079 FAM231AP0DMU4 169 aa9.88□□□□□ -0.83
HLA-DQB1-202ENST00000399079 FAM231CP0DMU5 169 aa9.88□□□□□ -0.83
HLA-DQB1-202ENST00000399079 TPT1P13693 172 aaKnown RBP9.88□□□□□ -0.83
HLA-DQB1-202ENST00000399079 HOXA5P20719 270 aa9.88□□□□□ -0.83
HLA-DQB1-202ENST00000399079 ZNF80P51504 273 aaPredicted RBP9.88□□□□□ -0.83
HLA-DQB1-202ENST00000399079 TMEM183BQ1AE95 376 aa9.88□□□□□ -0.83
HLA-DQB1-202ENST00000399079 TMEM183AQ8IXX5 376 aa9.88□□□□□ -0.83
HLA-DQB1-202ENST00000399079 TMEM75Q8N9X5 138 aa9.88□□□□□ -0.83
HLA-DQB1-202ENST00000399079 TRGV2A0A075B6R0 118 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 GNRH2O43555 120 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 SPINK4O60575 86 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 C1QBP02746 253 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 EIF5AP63241 154 aaKnown RBP9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 STOML3Q8TAV4 291 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 NDFIP1Q9BT67 221 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 MRPL16Q9NX20 251 aaKnown RBP9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 FRAS1Q86XX4 4008 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 TRAV21A0A0B4J279 112 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 NUDT3O95989 172 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 ZNF415Q09FC8 603 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 TDRG1Q3Y452 100 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 AKAP14Q86UN6 197 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 POM121L12Q8N7R1 296 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 C15orf53Q8NAA6 179 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 MBD3L1Q8WWY6 194 aa9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 NKX6-2Q9C056 277 aaPredicted RBP9.87□□□□□ -0.83
HLA-DQB1-202ENST00000399079 TRAV26-1A0A087WT03 109 aa9.86□□□□□ -0.83
HLA-DQB1-202ENST00000399079 A0A0J9YY99 117 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms