RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 ZNF833PQ6ZTB9 187 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 ERG28Q9UKR5 140 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 H3BRM9 83 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 OVOL3O00110 214 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 IGLV1-44P01699 117 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 PLNP26678 52 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 HLA-DMBP28068 263 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 GATA4P43694 442 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 ADAMTSL5Q6ZMM2 481 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 FAM231DQ6ZW35 169 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 DPH3P1Q9H4G8 78 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 ZNF492Q9P255 531 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 FAM215AQ9Y5M1 114 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 DSPP15924 2871 aaKnown RBP8.57□□□□□ -1.04
CCDC40-204ENST00000397545 SPRY2O43597 315 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 IGLC1P0CG04 106 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 HTN3P15516 51 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 IL17RELQ6ZVW7 336 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 TMEM101Q96IK0 257 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 RHPN1-AS1Q9BWJ2 59 aa8.57□□□□□ -1.04
CCDC40-204ENST00000397545 NPYP01303 97 aa8.56□□□□□ -1.04
CCDC40-204ENST00000397545 LINC00173Q6ZV60 143 aa8.56□□□□□ -1.04
CCDC40-204ENST00000397545 GFRA4Q9GZZ7 299 aa8.56□□□□□ -1.04
CCDC40-204ENST00000397545 SIGLEC8Q9NYZ4 499 aa8.56□□□□□ -1.04
CCDC40-204ENST00000397545 ATP6V0E1O15342 81 aa8.56□□□□□ -1.04
CCDC40-204ENST00000397545 C9orf139Q6ZV77 190 aa8.56□□□□□ -1.04
CCDC40-204ENST00000397545 TEX29Q8N6K0 151 aa8.56□□□□□ -1.04
CCDC40-204ENST00000397545 PRR25Q96S07 402 aa8.56□□□□□ -1.04
CCDC40-204ENST00000397545 BOD1L1Q8NFC6 3051 aa8.56□□□□□ -1.04
CCDC40-204ENST00000397545 EFNA4P52798 201 aa8.56□□□□□ -1.04
CCDC40-204ENST00000397545 NEGR1Q7Z3B1 354 aa8.56□□□□□ -1.04
CCDC40-204ENST00000397545 MRPL52Q86TS9 123 aaKnown RBP8.56□□□□□ -1.04
CCDC40-204ENST00000397545 TANC2Q9HCD6 1990 aa8.56□□□□□ -1.04
CCDC40-204ENST00000397545 KNCNA6PVL3 124 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 MINOS1Q5TGZ0 78 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 MINOS1-NBL1R4GNA1 71 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 ESDP10768 282 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 CKS1BP61024 79 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 C3orf36Q3SXR2 165 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 VGLL1Q99990 258 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 IGHV3-53P01767 116 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 PDE6HQ13956 83 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 CT83Q5H943 113 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 FAM120AOSQ5T036 256 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 RUSC1-AS1Q66K80 236 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 PIP4P1Q86T03 277 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 ANAPC13Q9BS18 74 aa8.55□□□□□ -1.04
CCDC40-204ENST00000397545 SPXQ9BT56 116 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 DKK2Q9UBU2 259 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 ABCA12Q86UK0 2595 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 AMTNQ6UX39 209 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 COPS9Q8WXC6 57 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 ZNF625Q96I27 306 aaPredicted RBP8.54□□□□□ -1.04
CCDC40-204ENST00000397545 LINC00477Q96M19 166 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 PRSS22Q9GZN4 317 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 MRPL35Q9NZE8 188 aaKnown RBP8.54□□□□□ -1.04
CCDC40-204ENST00000397545 KIR2DL5BA0A0G2JN68 375 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 KIR2DL5BA0A0G2JPC4 375 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 K7ENP7 123 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 VCYO14598 125 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 DUSP14O95147 198 aaKnown RBP8.54□□□□□ -1.04
CCDC40-204ENST00000397545 BVES-AS1Q5T3Y7 98 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 KIR2DL5AQ8N109 375 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 PHLDA1Q8WV24 401 aaPredicted RBP8.54□□□□□ -1.04
CCDC40-204ENST00000397545 HIVEP2P31629 2446 aa8.54□□□□□ -1.04
CCDC40-204ENST00000397545 MTORP42345 2549 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 OOSP1A8MZH6 123 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 K7ERJ3 54 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 M0R1W7 72 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 PF4P02776 101 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 POU2AF1Q16633 256 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 C2orf66Q6UXQ4 117 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 CTSZQ9UBR2 303 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 IGLC7A0M8Q6 106 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 COX8AP10176 69 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 TEX36Q5VZQ5 186 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 STHQ8IWL8 128 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 PKD1L2Q7Z442 2459 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 PRSS46E5RG02 174 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 SLC25A16P16260 332 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 Q8TCH9 128 aa8.53□□□□□ -1.04
CCDC40-204ENST00000397545 DLX4Q92988 240 aaPredicted RBP8.53□□□□□ -1.04
CCDC40-204ENST00000397545 MGAQ8IWI9 3026 aa8.52□□□□□ -1.04
CCDC40-204ENST00000397545 IGKV1OR2-108A0A075B7D4 117 aa8.52□□□□□ -1.04
CCDC40-204ENST00000397545 NDUFS7O75251 213 aa8.52□□□□□ -1.04
CCDC40-204ENST00000397545 ZNF491Q8N8L2 437 aa8.52□□□□□ -1.04
CCDC40-204ENST00000397545 UBE2E2Q96LR5 201 aa8.52□□□□□ -1.04
CCDC40-204ENST00000397545 TRBV7-1A0A0A6YYK4 115 aa8.52□□□□□ -1.05
CCDC40-204ENST00000397545 IGLV2-14P01704 120 aa8.52□□□□□ -1.05
CCDC40-204ENST00000397545 GATA1P15976 413 aaPredicted RBP8.52□□□□□ -1.05
CCDC40-204ENST00000397545 MAPK1IP1LQ8NDC0 245 aa8.52□□□□□ -1.05
CCDC40-204ENST00000397545 C1orf159Q96HA4 380 aa8.52□□□□□ -1.05
CCDC40-204ENST00000397545 TNRC6AQ8NDV7 1962 aaKnown RBP8.52□□□□□ -1.05
CCDC40-204ENST00000397545 K7EP13 123 aa8.52□□□□□ -1.05
CCDC40-204ENST00000397545 M0R2P5 195 aa8.52□□□□□ -1.05
CCDC40-204ENST00000397545 GAGE2BQ13066 116 aa8.52□□□□□ -1.05
CCDC40-204ENST00000397545 GAGE2EQ4V326 116 aa8.52□□□□□ -1.05
CCDC40-204ENST00000397545 PATE2Q6UY27 113 aa8.52□□□□□ -1.05
CCDC40-204ENST00000397545 PCP2Q8IVA1 136 aa8.52□□□□□ -1.05
CCDC40-204ENST00000397545 GAGE2DQ9UEU5 116 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms