RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 M0R036 132 aa12.48□□□□□ -0.41
TSPAN4-205ENST00000397406 IGKV3-20P01619 116 aa12.48□□□□□ -0.41
TSPAN4-205ENST00000397406 RBMY1DP0C7P1 496 aaKnown RBP12.48□□□□□ -0.41
TSPAN4-205ENST00000397406 CRISP2P16562 243 aa12.48□□□□□ -0.41
TSPAN4-205ENST00000397406 GTSCR1Q86UQ5 136 aa12.48□□□□□ -0.41
TSPAN4-205ENST00000397406 ZFAND2AQ8N6M9 145 aa12.48□□□□□ -0.41
TSPAN4-205ENST00000397406 CLUHP3Q96NS8 147 aa12.48□□□□□ -0.41
TSPAN4-205ENST00000397406 SNAPINO95295 136 aa12.47□□□□□ -0.41
TSPAN4-205ENST00000397406 SMUG1Q53HV7 270 aa12.47□□□□□ -0.41
TSPAN4-205ENST00000397406 PRR9Q5T870 116 aa12.47□□□□□ -0.41
TSPAN4-205ENST00000397406 LINC00322Q6ZN03 302 aaPredicted RBP12.47□□□□□ -0.41
TSPAN4-205ENST00000397406 Q8N1Y9 231 aa12.47□□□□□ -0.41
TSPAN4-205ENST00000397406 CRIP1P50238 77 aa12.46□□□□□ -0.41
TSPAN4-205ENST00000397406 ZNF80P51504 273 aaPredicted RBP12.46□□□□□ -0.41
TSPAN4-205ENST00000397406 PRR27Q6MZM9 219 aa12.46□□□□□ -0.41
TSPAN4-205ENST00000397406 ATRAIDQ6UW56 229 aa12.46□□□□□ -0.41
TSPAN4-205ENST00000397406 TRPT1Q86TN4 253 aaKnown RBP12.46□□□□□ -0.41
TSPAN4-205ENST00000397406 STHQ8IWL8 128 aa12.46□□□□□ -0.41
TSPAN4-205ENST00000397406 KLLNB2CW77 178 aa12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 B4DEV8 164 aa12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 LEPP41159 167 aa12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 RHEBQ15382 184 aa12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 DEFB125Q8N687 156 aa12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 BIN3Q9NQY0 253 aa12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 COL7A1Q02388 2944 aa12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 C7orf77A4D0Y5 90 aa12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 C19orf71A6NCJ1 209 aa12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 KIR3DS1Q14943 382 aa12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 FAM231DQ6ZW35 169 aa12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 SFRP2Q96HF1 295 aa12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 RNASE7Q9H1E1 156 aaKnown RBP12.45□□□□□ -0.42
TSPAN4-205ENST00000397406 J3KRW8 73 aa12.44□□□□□ -0.42
TSPAN4-205ENST00000397406 M0R2Z0 102 aa12.44□□□□□ -0.42
TSPAN4-205ENST00000397406 SPINK13Q1W4C9 94 aa12.44□□□□□ -0.42
TSPAN4-205ENST00000397406 RNF212Q495C1 297 aa12.44□□□□□ -0.42
TSPAN4-205ENST00000397406 OSTCQ9NRP0 149 aa12.44□□□□□ -0.42
TSPAN4-205ENST00000397406 GPX1P07203 203 aa12.43□□□□□ -0.42
TSPAN4-205ENST00000397406 TSPOP30536 169 aa12.43□□□□□ -0.42
TSPAN4-205ENST00000397406 CDKN1BP46527 198 aa12.43□□□□□ -0.42
TSPAN4-205ENST00000397406 ERVFC1-1P60608 527 aa12.43□□□□□ -0.42
TSPAN4-205ENST00000397406 BTN1A1Q13410 526 aa12.43□□□□□ -0.42
TSPAN4-205ENST00000397406 IBA57Q5T440 356 aaKnown RBP12.43□□□□□ -0.42
TSPAN4-205ENST00000397406 FAM162BQ5T6X4 162 aa12.43□□□□□ -0.42
TSPAN4-205ENST00000397406 NUDT10Q8NFP7 164 aa12.43□□□□□ -0.42
TSPAN4-205ENST00000397406 NUDT11Q96G61 164 aa12.43□□□□□ -0.42
TSPAN4-205ENST00000397406 ZMAT5Q9UDW3 170 aaKnown RBP12.43□□□□□ -0.42
TSPAN4-205ENST00000397406 A0A087WWC5 75 aa12.42□□□□□ -0.42
TSPAN4-205ENST00000397406 SH2D1AO60880 128 aa12.42□□□□□ -0.42
TSPAN4-205ENST00000397406 PFN1P07737 140 aaKnown RBP12.42□□□□□ -0.42
TSPAN4-205ENST00000397406 FXYD7P58549 80 aa12.42□□□□□ -0.42
TSPAN4-205ENST00000397406 Q6AWC8 147 aa12.42□□□□□ -0.42
TSPAN4-205ENST00000397406 Q6ZQT7 251 aa12.42□□□□□ -0.42
TSPAN4-205ENST00000397406 OR10G8Q8NGN5 311 aa12.42□□□□□ -0.42
TSPAN4-205ENST00000397406 RPS10P5Q9NQ39 176 aa12.42□□□□□ -0.42
TSPAN4-205ENST00000397406 TRAV12-2A0A075B6T6 113 aa12.41□□□□□ -0.42
TSPAN4-205ENST00000397406 C7orf71A4D174 169 aa12.41□□□□□ -0.42
TSPAN4-205ENST00000397406 FABP5P3A8MUU1 101 aa12.41□□□□□ -0.42
TSPAN4-205ENST00000397406 CRXO43186 299 aaPredicted RBP12.41□□□□□ -0.42
TSPAN4-205ENST00000397406 MT-ND4LP03901 98 aa12.41□□□□□ -0.42
TSPAN4-205ENST00000397406 RNASE4P34096 147 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-205ENST00000397406 GFI1BQ5VTD9 330 aa12.41□□□□□ -0.42
TSPAN4-205ENST00000397406 ANAPC16Q96DE5 110 aa12.41□□□□□ -0.42
TSPAN4-205ENST00000397406 SRD5A3Q9H8P0 318 aa12.41□□□□□ -0.42
TSPAN4-205ENST00000397406 V9GYV3 84 aa12.41□□□□□ -0.42
TSPAN4-205ENST00000397406 DEFB121Q5J5C9 76 aa12.4□□□□□ -0.42
TSPAN4-205ENST00000397406 C15orf54Q8N8G6 183 aa12.4□□□□□ -0.42
TSPAN4-205ENST00000397406 DAZAP1Q96EP5 407 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-205ENST00000397406 TRAV21A0A0B4J279 112 aa12.39□□□□□ -0.43
TSPAN4-205ENST00000397406 PPP1R2P9O14990 202 aa12.39□□□□□ -0.43
TSPAN4-205ENST00000397406 GATCO43716 136 aaKnown RBP12.39□□□□□ -0.43
TSPAN4-205ENST00000397406 ZNF324O75467 553 aaPredicted RBP12.39□□□□□ -0.43
TSPAN4-205ENST00000397406 P01737 135 aa12.39□□□□□ -0.43
TSPAN4-205ENST00000397406 RPL35AP18077 110 aaKnown RBP12.39□□□□□ -0.43
TSPAN4-205ENST00000397406 CTDSP1Q9GZU7 261 aa12.39□□□□□ -0.43
TSPAN4-205ENST00000397406 TMEM242Q9NWH2 141 aa12.39□□□□□ -0.43
TSPAN4-205ENST00000397406 C11orf21Q9P2W6 132 aa12.39□□□□□ -0.43
TSPAN4-205ENST00000397406 AMBPP02760 352 aa12.38□□□□□ -0.43
TSPAN4-205ENST00000397406 GIG44P09565 113 aaPredicted RBP12.38□□□□□ -0.43
TSPAN4-205ENST00000397406 RPP21Q9H633 154 aaKnown RBP12.38□□□□□ -0.43
TSPAN4-205ENST00000397406 TRAV12-3A0A0B4J271 114 aa12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 ZNF705GA8MUZ8 300 aaPredicted RBP12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 H7BYZ3 331 aa12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 SCO1O75880 301 aa12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 RBMY1A1P0DJD3 496 aaKnown RBP12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 RBMY1CP0DJD4 496 aa12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 NUTF2P61970 127 aaKnown RBP12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 RBMY1FQ15415 496 aaKnown RBP12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 LINC01559Q495D7 138 aa12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 MORN3Q6PF18 240 aaPredicted RBP12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 RPL19P84098 196 aaKnown RBP12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 ZNF575Q86XF7 245 aa12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 OR2D3Q8NGH3 330 aa12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 XCL2Q9UBD3 114 aa12.37□□□□□ -0.43
TSPAN4-205ENST00000397406 KMT2CQ8NEZ4 4911 aaKnown RBP12.36□□□□□ -0.43
TSPAN4-205ENST00000397406 IGKV3D-20A0A0C4DH25 116 aa12.36□□□□□ -0.43
TSPAN4-205ENST00000397406 CA1P00915 261 aaPredicted RBP12.36□□□□□ -0.43
TSPAN4-205ENST00000397406 IGHV4-30-4P0DP06 118 aa12.36□□□□□ -0.43
TSPAN4-205ENST00000397406 CT83Q5H943 113 aa12.36□□□□□ -0.43
TSPAN4-205ENST00000397406 B9D2Q9BPU9 175 aa12.36□□□□□ -0.43
TSPAN4-205ENST00000397406 LOC102724200A0A096LPH7 203 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms