RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ZC2HC1AQ96GY0 325 aa17.36■□□□□ 0.37
TSPAN4-202ENST00000397396 C1QTNF4Q9BXJ3 329 aa17.36■□□□□ 0.37
TSPAN4-202ENST00000397396 M0R036 132 aa17.35■□□□□ 0.37
TSPAN4-202ENST00000397396 SNAPINO95295 136 aa17.35■□□□□ 0.37
TSPAN4-202ENST00000397396 ISOC2Q96AB3 205 aa17.35■□□□□ 0.37
TSPAN4-202ENST00000397396 DAZAP1Q96EP5 407 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-202ENST00000397396 TRAV21A0A0B4J279 112 aa17.34■□□□□ 0.37
TSPAN4-202ENST00000397396 RBMY1BA6NDE4 496 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-202ENST00000397396 RBMY1EA6NEQ0 496 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-202ENST00000397396 K7EN84 100 aa17.34■□□□□ 0.37
TSPAN4-202ENST00000397396 PFN1P07737 140 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-202ENST00000397396 RBMY1DP0C7P1 496 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-202ENST00000397396 SPINK13Q1W4C9 94 aa17.34■□□□□ 0.37
TSPAN4-202ENST00000397396 PRR27Q6MZM9 219 aa17.34■□□□□ 0.37
TSPAN4-202ENST00000397396 C20orf144Q9BQM9 153 aa17.34■□□□□ 0.37
TSPAN4-202ENST00000397396 LOC102724200A0A096LPH7 203 aaPredicted RBP17.33■□□□□ 0.36
TSPAN4-202ENST00000397396 C7orf71A4D174 169 aa17.33■□□□□ 0.36
TSPAN4-202ENST00000397396 FABP5P3A8MUU1 101 aa17.33■□□□□ 0.36
TSPAN4-202ENST00000397396 M0R2Z0 102 aa17.33■□□□□ 0.36
TSPAN4-202ENST00000397396 Q6AWC8 147 aa17.33■□□□□ 0.36
TSPAN4-202ENST00000397396 FAM231DQ6ZW35 169 aa17.33■□□□□ 0.36
TSPAN4-202ENST00000397396 C15orf54Q8N8G6 183 aa17.33■□□□□ 0.36
TSPAN4-202ENST00000397396 KIR2DL5BA0A0G2JN68 375 aa17.32■□□□□ 0.36
TSPAN4-202ENST00000397396 KIR2DL5BA0A0G2JPC4 375 aa17.32■□□□□ 0.36
TSPAN4-202ENST00000397396 A8MZ25 164 aa17.32■□□□□ 0.36
TSPAN4-202ENST00000397396 APOC4P55056 127 aa17.32■□□□□ 0.36
TSPAN4-202ENST00000397396 RHEBQ15382 184 aa17.32■□□□□ 0.36
TSPAN4-202ENST00000397396 KIR2DL5AQ8N109 375 aa17.32■□□□□ 0.36
TSPAN4-202ENST00000397396 KIR2DL5BQ8NHK3 375 aa17.32■□□□□ 0.36
TSPAN4-202ENST00000397396 AURKAIP1Q9NWT8 199 aaPredicted RBP17.32■□□□□ 0.36
TSPAN4-202ENST00000397396 PPP1R2P9O14990 202 aa17.31■□□□□ 0.36
TSPAN4-202ENST00000397396 INSP01308 110 aa17.31■□□□□ 0.36
TSPAN4-202ENST00000397396 IGHV4-30-4P0DP06 118 aa17.31■□□□□ 0.36
TSPAN4-202ENST00000397396 RPL35AP18077 110 aaKnown RBP17.31■□□□□ 0.36
TSPAN4-202ENST00000397396 ERVFC1-1P60608 527 aa17.31■□□□□ 0.36
TSPAN4-202ENST00000397396 OR5I1Q13606 314 aa17.31■□□□□ 0.36
TSPAN4-202ENST00000397396 IBA57Q5T440 356 aaKnown RBP17.31■□□□□ 0.36
TSPAN4-202ENST00000397396 CLRN3Q8NCR9 226 aa17.31■□□□□ 0.36
TSPAN4-202ENST00000397396 SFRP2Q96HF1 295 aa17.31■□□□□ 0.36
TSPAN4-202ENST00000397396 OSTCQ9NRP0 149 aa17.31■□□□□ 0.36
TSPAN4-202ENST00000397396 J3KRW8 73 aa17.3■□□□□ 0.36
TSPAN4-202ENST00000397396 MT-ND4LP03901 98 aa17.3■□□□□ 0.36
TSPAN4-202ENST00000397396 RNASE4P34096 147 aaKnown RBP17.3■□□□□ 0.36
TSPAN4-202ENST00000397396 GFI1BQ5VTD9 330 aa17.3■□□□□ 0.36
TSPAN4-202ENST00000397396 CSTL1Q9H114 145 aa17.3■□□□□ 0.36
TSPAN4-202ENST00000397396 AGRNO00468 2067 aa17.29■□□□□ 0.36
TSPAN4-202ENST00000397396 C19orf71A6NCJ1 209 aa17.29■□□□□ 0.36
TSPAN4-202ENST00000397396 SH2D1AO60880 128 aa17.29■□□□□ 0.36
TSPAN4-202ENST00000397396 P01737 135 aa17.29■□□□□ 0.36
TSPAN4-202ENST00000397396 BTN1A1Q13410 526 aa17.29■□□□□ 0.36
TSPAN4-202ENST00000397396 PRR9Q5T870 116 aa17.29■□□□□ 0.36
TSPAN4-202ENST00000397396 ANAPC16Q96DE5 110 aa17.29■□□□□ 0.36
TSPAN4-202ENST00000397396 FXYD7P58549 80 aa17.28■□□□□ 0.36
TSPAN4-202ENST00000397396 OR10G8Q8NGN5 311 aa17.28■□□□□ 0.36
TSPAN4-202ENST00000397396 TRAV12-2A0A075B6T6 113 aa17.27■□□□□ 0.36
TSPAN4-202ENST00000397396 CRXO43186 299 aaPredicted RBP17.27■□□□□ 0.36
TSPAN4-202ENST00000397396 CA1P00915 261 aaPredicted RBP17.27■□□□□ 0.36
TSPAN4-202ENST00000397396 ZNF80P51504 273 aaPredicted RBP17.27■□□□□ 0.36
TSPAN4-202ENST00000397396 TMEM256Q8N2U0 113 aa17.27■□□□□ 0.36
TSPAN4-202ENST00000397396 XKRY2A2RUG3 117 aa17.26■□□□□ 0.35
TSPAN4-202ENST00000397396 UBE2CO00762 179 aa17.26■□□□□ 0.35
TSPAN4-202ENST00000397396 GATCO43716 136 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-202ENST00000397396 CRIP1P50238 77 aa17.26■□□□□ 0.35
TSPAN4-202ENST00000397396 NUDT10Q8NFP7 164 aa17.26■□□□□ 0.35
TSPAN4-202ENST00000397396 NUDT11Q96G61 164 aa17.26■□□□□ 0.35
TSPAN4-202ENST00000397396 CTDSP1Q9GZU7 261 aa17.26■□□□□ 0.35
TSPAN4-202ENST00000397396 RNASE7Q9H1E1 156 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-202ENST00000397396 XCL2Q9UBD3 114 aa17.26■□□□□ 0.35
TSPAN4-202ENST00000397396 A0A087WWC5 75 aa17.25■□□□□ 0.35
TSPAN4-202ENST00000397396 TRAV12-3A0A0B4J271 114 aa17.25■□□□□ 0.35
TSPAN4-202ENST00000397396 RPS20P60866 119 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-202ENST00000397396 CT83Q5H943 113 aa17.25■□□□□ 0.35
TSPAN4-202ENST00000397396 LINC00322Q6ZN03 302 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-202ENST00000397396 KCNS1Q96KK3 526 aa17.25■□□□□ 0.35
TSPAN4-202ENST00000397396 RPP21Q9H633 154 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-202ENST00000397396 CMYA5Q8N3K9 4069 aa17.25■□□□□ 0.35
TSPAN4-202ENST00000397396 ZNF705GA8MUZ8 300 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-202ENST00000397396 ZNF324O75467 553 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-202ENST00000397396 RNF212Q495C1 297 aa17.24■□□□□ 0.35
TSPAN4-202ENST00000397396 LINC01559Q495D7 138 aa17.24■□□□□ 0.35
TSPAN4-202ENST00000397396 GOLT1BQ9Y3E0 138 aa17.24■□□□□ 0.35
TSPAN4-202ENST00000397396 C7orf77A4D0Y5 90 aa17.23■□□□□ 0.35
TSPAN4-202ENST00000397396 H7BYZ3 331 aa17.23■□□□□ 0.35
TSPAN4-202ENST00000397396 ORM1P02763 201 aa17.23■□□□□ 0.35
TSPAN4-202ENST00000397396 KIR3DS1Q14943 382 aa17.23■□□□□ 0.35
TSPAN4-202ENST00000397396 FAM159AQ6UWV7 190 aa17.23■□□□□ 0.35
TSPAN4-202ENST00000397396 PYGO2Q9BRQ0 406 aa17.23■□□□□ 0.35
TSPAN4-202ENST00000397396 TMEM189A5PLL7 270 aa17.22■□□□□ 0.35
TSPAN4-202ENST00000397396 OR2D3Q8NGH3 330 aa17.22■□□□□ 0.35
TSPAN4-202ENST00000397396 RPS10P5Q9NQ39 176 aa17.22■□□□□ 0.35
TSPAN4-202ENST00000397396 TMEM242Q9NWH2 141 aa17.22■□□□□ 0.35
TSPAN4-202ENST00000397396 MGAM2Q2M2H8 2515 aa17.22■□□□□ 0.35
TSPAN4-202ENST00000397396 CXCL1P09341 107 aa17.21■□□□□ 0.35
TSPAN4-202ENST00000397396 LINC00467Q9BRT7 94 aa17.21■□□□□ 0.35
TSPAN4-202ENST00000397396 TMEM208Q9BTX3 173 aa17.21■□□□□ 0.35
TSPAN4-202ENST00000397396 NAGKQ9UJ70 344 aa17.21■□□□□ 0.35
TSPAN4-202ENST00000397396 V9GYV3 84 aa17.21■□□□□ 0.35
TSPAN4-202ENST00000397396 IGHV1OR15-1A0A075B7D0 117 aa17.21■□□□□ 0.34
TSPAN4-202ENST00000397396 A8MWL6 223 aa17.21■□□□□ 0.34
TSPAN4-202ENST00000397396 GIG44P09565 113 aaPredicted RBP17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 483.5 ms