RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 H3BUA1 57 aa13.76□□□□□ -0.21
UBFD1-201ENST00000395878 HLA-DRB4P13762 266 aa13.76□□□□□ -0.21
UBFD1-201ENST00000395878 TMEM243Q9BU79 118 aa13.76□□□□□ -0.21
UBFD1-201ENST00000395878 HLA-DRB4X5D2U9 266 aa13.76□□□□□ -0.21
UBFD1-201ENST00000395878 NPYP01303 97 aa13.76□□□□□ -0.21
UBFD1-201ENST00000395878 C1orf122Q6ZSJ8 110 aa13.76□□□□□ -0.21
UBFD1-201ENST00000395878 C3orf56Q8N813 242 aa13.76□□□□□ -0.21
UBFD1-201ENST00000395878 ZNF491Q8N8L2 437 aa13.76□□□□□ -0.21
UBFD1-201ENST00000395878 ARFGEF3Q5TH69 2177 aa13.75□□□□□ -0.21
UBFD1-201ENST00000395878 LTAP01374 205 aa13.75□□□□□ -0.21
UBFD1-201ENST00000395878 ELANEP08246 267 aa13.75□□□□□ -0.21
UBFD1-201ENST00000395878 SPINK8P0C7L1 97 aa13.75□□□□□ -0.21
UBFD1-201ENST00000395878 INAFM2P0DMQ5 153 aa13.75□□□□□ -0.21
UBFD1-201ENST00000395878 ZNF48Q96MX3 618 aaPredicted RBP13.75□□□□□ -0.21
UBFD1-201ENST00000395878 MGAMO43451 1857 aa13.75□□□□□ -0.21
UBFD1-201ENST00000395878 F5H768 121 aa13.75□□□□□ -0.21
UBFD1-201ENST00000395878 CFHR3Q02985 330 aa13.75□□□□□ -0.21
UBFD1-201ENST00000395878 ZNRF2Q8NHG8 242 aa13.75□□□□□ -0.21
UBFD1-201ENST00000395878 C20orf78Q9BR46 151 aa13.75□□□□□ -0.21
UBFD1-201ENST00000395878 TRAV12-2A0A075B6T6 113 aa13.75□□□□□ -0.21
UBFD1-201ENST00000395878 IGLL1P15814 213 aa13.74□□□□□ -0.21
UBFD1-201ENST00000395878 ZNF561-AS1K7EIQ3 104 aa13.74□□□□□ -0.21
UBFD1-201ENST00000395878 CREBBPQ92793 2442 aa13.74□□□□□ -0.21
UBFD1-201ENST00000395878 F8VRH5 84 aa13.74□□□□□ -0.21
UBFD1-201ENST00000395878 H3BMM0 161 aa13.74□□□□□ -0.21
UBFD1-201ENST00000395878 VWC2Q2TAL6 325 aa13.74□□□□□ -0.21
UBFD1-201ENST00000395878 UBE2WQ96B02 151 aa13.74□□□□□ -0.21
UBFD1-201ENST00000395878 MRPL35Q9NZE8 188 aaKnown RBP13.74□□□□□ -0.21
UBFD1-201ENST00000395878 DOCK10Q96BY6 2186 aa13.73□□□□□ -0.21
UBFD1-201ENST00000395878 IGHV2-70P01814 119 aa13.73□□□□□ -0.21
UBFD1-201ENST00000395878 GAGE7O76087 117 aa13.73□□□□□ -0.21
UBFD1-201ENST00000395878 GAGE12FP0CL80 117 aa13.73□□□□□ -0.21
UBFD1-201ENST00000395878 GAGE12GP0CL81 117 aa13.73□□□□□ -0.21
UBFD1-201ENST00000395878 GAGE12IP0CL82 117 aa13.73□□□□□ -0.21
UBFD1-201ENST00000395878 LYPD6BQ8NI32 183 aa13.73□□□□□ -0.21
UBFD1-201ENST00000395878 NDUFA12Q9UI09 145 aa13.73□□□□□ -0.21
UBFD1-201ENST00000395878 PIP4P1Q86T03 277 aa13.73□□□□□ -0.21
UBFD1-201ENST00000395878 C11orf53Q8IXP5 236 aa13.73□□□□□ -0.21
UBFD1-201ENST00000395878 IGLC7A0M8Q6 106 aa13.72□□□□□ -0.21
UBFD1-201ENST00000395878 ATP6V0BQ99437 205 aa13.72□□□□□ -0.21
UBFD1-201ENST00000395878 SOCS3O14543 225 aa13.72□□□□□ -0.21
UBFD1-201ENST00000395878 TAL2Q16559 108 aa13.72□□□□□ -0.21
UBFD1-201ENST00000395878 DOCK11Q5JSL3 2073 aa13.72□□□□□ -0.21
UBFD1-201ENST00000395878 HELZP42694 1942 aaKnown RBP13.72□□□□□ -0.21
UBFD1-201ENST00000395878 TCF15Q12870 199 aa13.72□□□□□ -0.21
UBFD1-201ENST00000395878 FAM120AOSQ5T036 256 aa13.72□□□□□ -0.21
UBFD1-201ENST00000395878 WDR81Q562E7 1941 aa13.71□□□□□ -0.21
UBFD1-201ENST00000395878 C22orf46C9J442 243 aa13.71□□□□□ -0.22
UBFD1-201ENST00000395878 PFN2P35080 140 aa13.71□□□□□ -0.22
UBFD1-201ENST00000395878 MRPL53Q96EL3 112 aaKnown RBP13.71□□□□□ -0.22
UBFD1-201ENST00000395878 K7EN84 100 aa13.7□□□□□ -0.22
UBFD1-201ENST00000395878 APOC4P55056 127 aa13.7□□□□□ -0.22
UBFD1-201ENST00000395878 WIPF2Q8TF74 440 aaPredicted RBP13.7□□□□□ -0.22
UBFD1-201ENST00000395878 IGHV3-38A0A0C4DH36 116 aa13.7□□□□□ -0.22
UBFD1-201ENST00000395878 SHISA9B4DS77 424 aa13.7□□□□□ -0.22
UBFD1-201ENST00000395878 RNF138Q8WVD3 245 aa13.7□□□□□ -0.22
UBFD1-201ENST00000395878 EDA2RQ9HAV5 297 aa13.7□□□□□ -0.22
UBFD1-201ENST00000395878 CTSZQ9UBR2 303 aa13.7□□□□□ -0.22
UBFD1-201ENST00000395878 PPDPFLQ8WWR9 84 aa13.69□□□□□ -0.22
UBFD1-201ENST00000395878 GAGE6Q13070 117 aa13.69□□□□□ -0.22
UBFD1-201ENST00000395878 RBAKDNA6NC62 111 aa13.69□□□□□ -0.22
UBFD1-201ENST00000395878 HOXB4P17483 251 aaPredicted RBP13.69□□□□□ -0.22
UBFD1-201ENST00000395878 LENEPQ9Y5L5 61 aa13.69□□□□□ -0.22
UBFD1-201ENST00000395878 F8W1H4 67 aa13.69□□□□□ -0.22
UBFD1-201ENST00000395878 NOTCH3Q9UM47 2321 aa13.68□□□□□ -0.22
UBFD1-201ENST00000395878 HERVK_113P63121 156 aa13.68□□□□□ -0.22
UBFD1-201ENST00000395878 BVES-AS1Q5T3Y7 98 aa13.68□□□□□ -0.22
UBFD1-201ENST00000395878 K7EP34 96 aa13.68□□□□□ -0.22
UBFD1-201ENST00000395878 SIVA1O15304 175 aa13.68□□□□□ -0.22
UBFD1-201ENST00000395878 FOXI2Q6ZQN5 318 aa13.68□□□□□ -0.22
UBFD1-201ENST00000395878 SPANXA1Q9NS26 97 aa13.68□□□□□ -0.22
UBFD1-201ENST00000395878 PRO1854Q9UHT4 67 aa13.68□□□□□ -0.22
UBFD1-201ENST00000395878 NDUFS7O75251 213 aa13.67□□□□□ -0.22
UBFD1-201ENST00000395878 FGF6P10767 208 aa13.67□□□□□ -0.22
UBFD1-201ENST00000395878 ZNF493Q6ZR52 646 aa13.67□□□□□ -0.22
UBFD1-201ENST00000395878 CEND1Q8N111 149 aa13.67□□□□□ -0.22
UBFD1-201ENST00000395878 NPSP0C0P6 89 aa13.67□□□□□ -0.22
UBFD1-201ENST00000395878 J3QQQ9 107 aa13.67□□□□□ -0.22
UBFD1-201ENST00000395878 KLF5Q13887 457 aaPredicted RBP13.67□□□□□ -0.22
UBFD1-201ENST00000395878 DYNAPQ8N1N2 210 aa13.67□□□□□ -0.22
UBFD1-201ENST00000395878 C17orf77Q96MU5 243 aa13.67□□□□□ -0.22
UBFD1-201ENST00000395878 K7EMI3 77 aa13.67□□□□□ -0.22
UBFD1-201ENST00000395878 KRTAP27-1Q3LI81 207 aa13.67□□□□□ -0.22
UBFD1-201ENST00000395878 Q6ZSR3 168 aa13.67□□□□□ -0.22
UBFD1-201ENST00000395878 KIAA1671Q9BY89 1806 aa13.66□□□□□ -0.22
UBFD1-201ENST00000395878 LHBP01229 141 aa13.66□□□□□ -0.22
UBFD1-201ENST00000395878 AGPAT4-IT1Q9H0P7 198 aa13.66□□□□□ -0.22
UBFD1-201ENST00000395878 NBL1P41271 181 aa13.66□□□□□ -0.22
UBFD1-201ENST00000395878 NKAPP1Q8N9T2 125 aa13.66□□□□□ -0.22
UBFD1-201ENST00000395878 ANAPC1Q9H1A4 1944 aa13.66□□□□□ -0.22
UBFD1-201ENST00000395878 IGFL2Q6UWQ7 119 aa13.65□□□□□ -0.22
UBFD1-201ENST00000395878 ASPHD1Q5U4P2 390 aa13.65□□□□□ -0.22
UBFD1-201ENST00000395878 EGR2P11161 476 aaPredicted RBP13.65□□□□□ -0.23
UBFD1-201ENST00000395878 UTF1Q5T230 341 aa13.65□□□□□ -0.23
UBFD1-201ENST00000395878 FGF23Q9GZV9 251 aaPredicted RBP13.65□□□□□ -0.23
UBFD1-201ENST00000395878 RHOHQ15669 191 aa13.64□□□□□ -0.23
UBFD1-201ENST00000395878 ETDBQ3ZM63 59 aa13.64□□□□□ -0.23
UBFD1-201ENST00000395878 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.64□□□□□ -0.232e-8■■■□□ 17.8
UBFD1-201ENST00000395878 A0A1W2PPM0 123 aa13.64□□□□□ -0.23
UBFD1-201ENST00000395878 HLA-DMBP28068 263 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms