RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 NDUFV3P56181 108 aaKnown RBP17.03■□□□□ 0.32
CLDND1-202ENST00000394180 WFDC3Q8IUB2 231 aa17.03■□□□□ 0.32
CLDND1-202ENST00000394180 C8orf31Q8N9H6 132 aa17.03■□□□□ 0.32
CLDND1-202ENST00000394180 IGHV3OR15-7A0A075B7D8 119 aa17.02■□□□□ 0.32
CLDND1-202ENST00000394180 ZNF474Q6S9Z5 364 aaPredicted RBP17.02■□□□□ 0.32
CLDND1-202ENST00000394180 IGLV2-18A0A075B6J9 118 aa17.02■□□□□ 0.32
CLDND1-202ENST00000394180 IGLV1-44P01699 117 aa17.02■□□□□ 0.32
CLDND1-202ENST00000394180 GAGE2BQ13066 116 aa17.02■□□□□ 0.32
CLDND1-202ENST00000394180 GAGE2EQ4V326 116 aa17.02■□□□□ 0.32
CLDND1-202ENST00000394180 GAGE2DQ9UEU5 116 aa17.02■□□□□ 0.32
CLDND1-202ENST00000394180 FABP5P3A8MUU1 101 aa17.01■□□□□ 0.31
CLDND1-202ENST00000394180 IGHV3-48P01763 117 aa17.01■□□□□ 0.31
CLDND1-202ENST00000394180 GATA4P43694 442 aa17.01■□□□□ 0.31
CLDND1-202ENST00000394180 FAM169BQ8N8A8 192 aa17.01■□□□□ 0.31
CLDND1-202ENST00000394180 CD40P25942 277 aa17.01■□□□□ 0.31
CLDND1-202ENST00000394180 Q71RC1 249 aaPredicted RBP17.01■□□□□ 0.31
CLDND1-202ENST00000394180 SMKR1H3BMG3 65 aa17■□□□□ 0.31
CLDND1-202ENST00000394180 H3BRN7 92 aa17■□□□□ 0.31
CLDND1-202ENST00000394180 LINC01600Q96MT4 127 aa17■□□□□ 0.31
CLDND1-202ENST00000394180 H7C1H1 209 aa17■□□□□ 0.31
CLDND1-202ENST00000394180 PSMB2P49721 201 aa17■□□□□ 0.31
CLDND1-202ENST00000394180 FBXL15Q9H469 300 aa17■□□□□ 0.31
CLDND1-202ENST00000394180 LYZP61626 148 aa16.99■□□□□ 0.31
CLDND1-202ENST00000394180 LINC00311Q8N616 119 aa16.99■□□□□ 0.31
CLDND1-202ENST00000394180 F8VRH5 84 aa16.98■□□□□ 0.31
CLDND1-202ENST00000394180 K7EMI3 77 aa16.98■□□□□ 0.31
CLDND1-202ENST00000394180 CECR9P0C854 216 aa16.98■□□□□ 0.31
CLDND1-202ENST00000394180 C10orf55Q5SWW7 151 aa16.98■□□□□ 0.31
CLDND1-202ENST00000394180 IFITM1P13164 125 aa16.98■□□□□ 0.31
CLDND1-202ENST00000394180 VKORC1Q9BQB6 163 aa16.98■□□□□ 0.31
CLDND1-202ENST00000394180 C8orf49Q96NF6 230 aa16.97■□□□□ 0.31
CLDND1-202ENST00000394180 LINC01549A6NIU2 74 aa16.97■□□□□ 0.31
CLDND1-202ENST00000394180 FAM90A27PA6NNH2 459 aa16.97■□□□□ 0.31
CLDND1-202ENST00000394180 MRPS12O15235 138 aaKnown RBP16.97■□□□□ 0.31
CLDND1-202ENST00000394180 SNCGO76070 127 aa16.97■□□□□ 0.31
CLDND1-202ENST00000394180 FAM27E3Q08E93 113 aa16.97■□□□□ 0.31
CLDND1-202ENST00000394180 LAGE3Q14657 143 aa16.97■□□□□ 0.31
CLDND1-202ENST00000394180 GAFA1Q96PS6 74 aa16.97■□□□□ 0.31
CLDND1-202ENST00000394180 AAMDCQ9H7C9 122 aa16.97■□□□□ 0.31
CLDND1-202ENST00000394180 CCL21O00585 134 aa16.96■□□□□ 0.3
CLDND1-202ENST00000394180 LGALS1P09382 135 aaKnown RBP16.96■□□□□ 0.3
CLDND1-202ENST00000394180 MRGPRG-AS1Q2M3A8 158 aa16.96■□□□□ 0.3
CLDND1-202ENST00000394180 TTC32Q5I0X7 151 aa16.96■□□□□ 0.3
CLDND1-202ENST00000394180 RUSC1-AS1Q66K80 236 aa16.96■□□□□ 0.3
CLDND1-202ENST00000394180 COL12A1Q99715 3063 aa16.95■□□□□ 0.3
CLDND1-202ENST00000394180 SMIM20Q8N5G0 67 aa16.95■□□□□ 0.3
CLDND1-202ENST00000394180 RNF7Q9UBF6 113 aa16.95■□□□□ 0.3
CLDND1-202ENST00000394180 FCN3O75636 299 aa16.94■□□□□ 0.3
CLDND1-202ENST00000394180 CLEC3BP05452 202 aa16.94■□□□□ 0.3
CLDND1-202ENST00000394180 ARL3P36405 182 aa16.94■□□□□ 0.3
CLDND1-202ENST00000394180 RPL27AP46776 148 aaKnown RBP16.94■□□□□ 0.3
CLDND1-202ENST00000394180 BBC3Q96PG8 261 aaPredicted RBP16.94■□□□□ 0.3
CLDND1-202ENST00000394180 RASL11BQ9BPW5 248 aa16.94■□□□□ 0.3
CLDND1-202ENST00000394180 FZR1Q9UM11 496 aa16.94■□□□□ 0.3
CLDND1-202ENST00000394180 AGRNO00468 2067 aa16.94■□□□□ 0.3
CLDND1-202ENST00000394180 CD7P09564 240 aa16.94■□□□□ 0.3
CLDND1-202ENST00000394180 MRPL23Q16540 153 aaKnown RBP16.94■□□□□ 0.3
CLDND1-202ENST00000394180 LOC107984156A0A0G2JMH3 177 aa16.93■□□□□ 0.3
CLDND1-202ENST00000394180 SCGB1C2P0DMR2 95 aa16.93■□□□□ 0.3
CLDND1-202ENST00000394180 DIAPH2-AS1Q14236 149 aa16.93■□□□□ 0.3
CLDND1-202ENST00000394180 C22orf34Q6ZV56 151 aa16.93■□□□□ 0.3
CLDND1-202ENST00000394180 ARL17AQ8IVW1 177 aa16.93■□□□□ 0.3
CLDND1-202ENST00000394180 AJUBAQ96IF1 538 aa16.93■□□□□ 0.3
CLDND1-202ENST00000394180 HIVEP3Q5T1R4 2406 aa16.93■□□□□ 0.3
CLDND1-202ENST00000394180 EGR2P11161 476 aaPredicted RBP16.93■□□□□ 0.3
CLDND1-202ENST00000394180 SLC25A16P16260 332 aa16.93■□□□□ 0.3
CLDND1-202ENST00000394180 TMEM78Q5T7P6 136 aa16.93■□□□□ 0.3
CLDND1-202ENST00000394180 PRR25Q96S07 402 aa16.93■□□□□ 0.3
CLDND1-202ENST00000394180 TMEM126AQ9H061 195 aa16.93■□□□□ 0.3
CLDND1-202ENST00000394180 HEATR1Q9H583 2144 aaKnown RBP16.92■□□□□ 0.3
CLDND1-202ENST00000394180 PRB1P04280 392 aa16.92■□□□□ 0.3
CLDND1-202ENST00000394180 PPP1R27Q86WC6 154 aa16.92■□□□□ 0.3
CLDND1-202ENST00000394180 ANKRD29Q8N6D5 301 aa16.92■□□□□ 0.3
CLDND1-202ENST00000394180 HCP5Q6MZN7 132 aa16.92■□□□□ 0.3
CLDND1-202ENST00000394180 PTH2Q96A98 100 aa16.92■□□□□ 0.3
CLDND1-202ENST00000394180 PSMG3-AS1Q96PY0 264 aa16.92■□□□□ 0.3
CLDND1-202ENST00000394180 SRSF8Q9BRL6 282 aaKnown RBP16.92■□□□□ 0.3
CLDND1-202ENST00000394180 TMSB15BA0A087X1C1 80 aa16.91■□□□□ 0.3
CLDND1-202ENST00000394180 TCL1BO95988 128 aa16.9■□□□□ 0.3
CLDND1-202ENST00000394180 ZFP2Q6ZN57 461 aa16.9■□□□□ 0.3
CLDND1-202ENST00000394180 ZNF672Q499Z4 452 aaPredicted RBP16.9■□□□□ 0.3
CLDND1-202ENST00000394180 IL17RELQ6ZVW7 336 aa16.9■□□□□ 0.3
CLDND1-202ENST00000394180 NDUFA11Q86Y39 141 aa16.9■□□□□ 0.3
CLDND1-202ENST00000394180 ADORA2A-AS1P86434 159 aa16.89■□□□□ 0.29
CLDND1-202ENST00000394180 CDSNQ15517 529 aa16.89■□□□□ 0.29
CLDND1-202ENST00000394180 C17orf77Q96MU5 243 aa16.89■□□□□ 0.29
CLDND1-202ENST00000394180 SLC25A15Q9Y619 301 aa16.89■□□□□ 0.29
CLDND1-202ENST00000394180 CADP27708 2225 aa16.89■□□□□ 0.29
CLDND1-202ENST00000394180 IGHV1-18A0A0C4DH31 117 aa16.89■□□□□ 0.29
CLDND1-202ENST00000394180 I3L2K1 104 aa16.89■□□□□ 0.29
CLDND1-202ENST00000394180 CRYGBP07316 175 aa16.89■□□□□ 0.29
CLDND1-202ENST00000394180 GNLYP22749 145 aa16.89■□□□□ 0.29
CLDND1-202ENST00000394180 TEX36Q5VZQ5 186 aa16.89■□□□□ 0.29
CLDND1-202ENST00000394180 OR10J6PQ8NGY7 276 aa16.89■□□□□ 0.29
CLDND1-202ENST00000394180 CCDC179H3BU77 68 aa16.88■□□□□ 0.29
CLDND1-202ENST00000394180 CNIH1O95406 144 aa16.88■□□□□ 0.29
CLDND1-202ENST00000394180 IGKV1-17P01599 117 aa16.88■□□□□ 0.29
CLDND1-202ENST00000394180 MDFICQ9P1T7 246 aa16.88■□□□□ 0.29
CLDND1-202ENST00000394180 NDUFA3O95167 84 aa16.88■□□□□ 0.29
CLDND1-202ENST00000394180 SPANXDQ9BXN6 97 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms