RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 FAM74A7A6NL05 159 aa13.57□□□□□ -0.24
PDLIM7-204ENST00000393546 LYRM9A8MSI8 78 aa13.57□□□□□ -0.24
PDLIM7-204ENST00000393546 PRR9Q5T870 116 aa13.57□□□□□ -0.24
PDLIM7-204ENST00000393546 CYB561D1Q8N8Q1 229 aa13.56□□□□□ -0.24
PDLIM7-204ENST00000393546 C2CD4CQ8TF44 421 aa13.56□□□□□ -0.24
PDLIM7-204ENST00000393546 LINC00467Q9BRT7 94 aa13.56□□□□□ -0.24
PDLIM7-204ENST00000393546 ATG101Q9BSB4 218 aa13.56□□□□□ -0.24
PDLIM7-204ENST00000393546 NDFIP1Q9BT67 221 aa13.56□□□□□ -0.24
PDLIM7-204ENST00000393546 TIMM8BQ9Y5J9 83 aaPredicted RBP13.56□□□□□ -0.24
PDLIM7-204ENST00000393546 A0A1B0GV50 99 aa13.55□□□□□ -0.24
PDLIM7-204ENST00000393546 PLAC8L1A1L4L8 177 aa13.55□□□□□ -0.24
PDLIM7-204ENST00000393546 FBLL1A6NHQ2 334 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-204ENST00000393546 RGS13O14921 159 aa13.55□□□□□ -0.24
PDLIM7-204ENST00000393546 SULT1A2P50226 295 aa13.55□□□□□ -0.24
PDLIM7-204ENST00000393546 DAD1P61803 113 aa13.55□□□□□ -0.24
PDLIM7-204ENST00000393546 EIF4E3Q8N5X7 224 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-204ENST00000393546 RNASE8Q8TDE3 154 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-204ENST00000393546 SGK494Q96LW2 274 aa13.55□□□□□ -0.24
PDLIM7-204ENST00000393546 TREM1Q9NP99 234 aa13.55□□□□□ -0.24
PDLIM7-204ENST00000393546 PSG8Q9UQ74 426 aa13.55□□□□□ -0.24
PDLIM7-204ENST00000393546 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-204ENST00000393546 CBY3A6NI87 242 aa13.54□□□□□ -0.24
PDLIM7-204ENST00000393546 CST9LP1Q5W188 147 aa13.54□□□□□ -0.24
PDLIM7-204ENST00000393546 TMEM75Q8N9X5 138 aa13.54□□□□□ -0.24
PDLIM7-204ENST00000393546 HIST1H2BAQ96A08 127 aa13.54□□□□□ -0.24
PDLIM7-204ENST00000393546 ARL2-SNX15V9GYD0 113 aa13.54□□□□□ -0.24
PDLIM7-204ENST00000393546 IGHV1OR15-1A0A075B7D0 117 aa13.53□□□□□ -0.24
PDLIM7-204ENST00000393546 DEFB131BA0A096LNP1 70 aa13.53□□□□□ -0.24
PDLIM7-204ENST00000393546 SNURFLB1AK76 121 aa13.53□□□□□ -0.24
PDLIM7-204ENST00000393546 F6UZH7 168 aa13.53□□□□□ -0.24
PDLIM7-204ENST00000393546 PEX7O00628 323 aa13.53□□□□□ -0.24
PDLIM7-204ENST00000393546 PPT1P50897 306 aa13.53□□□□□ -0.24
PDLIM7-204ENST00000393546 FLI1Q01543 452 aaPredicted RBP13.53□□□□□ -0.24
PDLIM7-204ENST00000393546 ANXA2RQ3ZCQ2 193 aa13.53□□□□□ -0.24
PDLIM7-204ENST00000393546 Q6AWC8 147 aa13.53□□□□□ -0.24
PDLIM7-204ENST00000393546 ZNF680Q8NEM1 530 aa13.53□□□□□ -0.24
PDLIM7-204ENST00000393546 TVP23CQ96ET8 276 aa13.53□□□□□ -0.24
PDLIM7-204ENST00000393546 NOP10Q9NPE3 64 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-204ENST00000393546 IGLL5B9A064 214 aa13.52□□□□□ -0.25
PDLIM7-204ENST00000393546 TEX46H3BTG2 121 aa13.52□□□□□ -0.25
PDLIM7-204ENST00000393546 PAGE4O60829 102 aa13.52□□□□□ -0.25
PDLIM7-204ENST00000393546 DEFB130BP0DP73 79 aa13.52□□□□□ -0.25
PDLIM7-204ENST00000393546 DEFB130AP0DP74 79 aa13.52□□□□□ -0.25
PDLIM7-204ENST00000393546 Q6ZQT7 251 aa13.52□□□□□ -0.25
PDLIM7-204ENST00000393546 PRNTQ86SH4 94 aa13.52□□□□□ -0.25
PDLIM7-204ENST00000393546 TCEAL7Q9BRU2 100 aa13.52□□□□□ -0.25
PDLIM7-204ENST00000393546 TRAV1-1A0A0B4J248 108 aa13.51□□□□□ -0.25
PDLIM7-204ENST00000393546 TRAV21A0A0B4J279 112 aa13.51□□□□□ -0.25
PDLIM7-204ENST00000393546 IGLV2-11P01706 119 aa13.51□□□□□ -0.25
PDLIM7-204ENST00000393546 NKX2-5P52952 324 aaPredicted RBP13.51□□□□□ -0.25
PDLIM7-204ENST00000393546 SAPCD1Q5SSQ6 148 aa13.51□□□□□ -0.25
PDLIM7-204ENST00000393546 LINC00479Q96M42 142 aa13.51□□□□□ -0.25
PDLIM7-204ENST00000393546 TRAV34A0A0B4J273 112 aa13.5□□□□□ -0.25
PDLIM7-204ENST00000393546 TCTAP57738 103 aa13.5□□□□□ -0.25
PDLIM7-204ENST00000393546 FAM159AQ6UWV7 190 aa13.5□□□□□ -0.25
PDLIM7-204ENST00000393546 PLECQ15149 4684 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-204ENST00000393546 KMT2CQ8NEZ4 4911 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-204ENST00000393546 LCE6AA0A183 80 aa13.49□□□□□ -0.25
PDLIM7-204ENST00000393546 HTN3P15516 51 aa13.49□□□□□ -0.25
PDLIM7-204ENST00000393546 ATP5G3P48201 142 aa13.49□□□□□ -0.25
PDLIM7-204ENST00000393546 DAZ2Q13117 558 aaKnown RBP13.49□□□□□ -0.25
PDLIM7-204ENST00000393546 SMUG1Q53HV7 270 aa13.49□□□□□ -0.25
PDLIM7-204ENST00000393546 MUC21Q5SSG8 566 aa13.49□□□□□ -0.25
PDLIM7-204ENST00000393546 GSN-AS1Q9NRJ2 163 aa13.49□□□□□ -0.25
PDLIM7-204ENST00000393546 CCL20P78556 96 aa13.48□□□□□ -0.25
PDLIM7-204ENST00000393546 IBA57Q5T440 356 aaKnown RBP13.48□□□□□ -0.25
PDLIM7-204ENST00000393546 C11orf72Q8NBR9 251 aa13.48□□□□□ -0.25
PDLIM7-204ENST00000393546 C8orf49Q96NF6 230 aa13.48□□□□□ -0.25
PDLIM7-204ENST00000393546 TP53TG3Q9ULZ0 132 aa13.48□□□□□ -0.25
PDLIM7-204ENST00000393546 UBE2G1P62253 170 aa13.47□□□□□ -0.25
PDLIM7-204ENST00000393546 MANBALQ9NQG1 85 aa13.47□□□□□ -0.25
PDLIM7-204ENST00000393546 GNG13Q9P2W3 67 aa13.47□□□□□ -0.25
PDLIM7-204ENST00000393546 NAGKQ9UJ70 344 aa13.47□□□□□ -0.25
PDLIM7-204ENST00000393546 IGHV4-4A0A075B6R2 117 aa13.46□□□□□ -0.25
PDLIM7-204ENST00000393546 GCGP01275 180 aa13.46□□□□□ -0.25
PDLIM7-204ENST00000393546 TCL1AP56279 114 aa13.46□□□□□ -0.25
PDLIM7-204ENST00000393546 FMC1Q96HJ9 113 aa13.46□□□□□ -0.25
PDLIM7-204ENST00000393546 FAM210BQ96KR6 192 aa13.46□□□□□ -0.25
PDLIM7-204ENST00000393546 ZFP30Q9Y2G7 519 aa13.46□□□□□ -0.25
PDLIM7-204ENST00000393546 BOLA1Q9Y3E2 137 aa13.46□□□□□ -0.25
PDLIM7-204ENST00000393546 KLF12Q9Y4X4 402 aa13.46□□□□□ -0.25
PDLIM7-204ENST00000393546 TRGV11A0A075B6L2 103 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 GAGE12BA1L429 117 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 GAGE7O76087 117 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 ATP5G1P05496 136 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 GAGE12FP0CL80 117 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 GAGE12GP0CL81 117 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 GAGE12IP0CL82 117 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 AKR1C3P42330 323 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 ZNF415Q09FC8 603 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 TMEM183BQ1AE95 376 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 TDRG1Q3Y452 100 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 ALKAL2Q6UX46 152 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 TMEM183AQ8IXX5 376 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 LINC00612Q8N6U2 182 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 KCNS1Q96KK3 526 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 APLNQ9ULZ1 77 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 LYSTQ99698 3801 aa13.45□□□□□ -0.26
PDLIM7-204ENST00000393546 S100A9P06702 114 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-204ENST00000393546 ZNF80P51504 273 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms