RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MIFP14174 115 aa9.61□□□□□ -0.87
USP44-202ENST00000393091 RBMY1FQ15415 496 aaKnown RBP9.61□□□□□ -0.87
USP44-202ENST00000393091 IQCF2Q8IXL9 164 aa9.61□□□□□ -0.87
USP44-202ENST00000393091 PRR9Q5T870 116 aa9.61□□□□□ -0.87
USP44-202ENST00000393091 RCHY1Q96PM5 261 aa9.61□□□□□ -0.87
USP44-202ENST00000393091 ASCL2Q99929 193 aa9.61□□□□□ -0.87
USP44-202ENST00000393091 PYGO2Q9BRQ0 406 aa9.61□□□□□ -0.87
USP44-202ENST00000393091 BIN3Q9NQY0 253 aa9.61□□□□□ -0.87
USP44-202ENST00000393091 DYNC2H1Q8NCM8 4307 aaKnown RBP9.61□□□□□ -0.87
USP44-202ENST00000393091 H7BYZ3 331 aa9.61□□□□□ -0.87
USP44-202ENST00000393091 RPL35P42766 123 aaKnown RBP9.61□□□□□ -0.87
USP44-202ENST00000393091 AGRNO00468 2067 aa9.6□□□□□ -0.87
USP44-202ENST00000393091 MGAM2Q2M2H8 2515 aa9.6□□□□□ -0.87
USP44-202ENST00000393091 PRB2P02812 416 aaPredicted RBP9.6□□□□□ -0.87
USP44-202ENST00000393091 RPL35AP18077 110 aaKnown RBP9.6□□□□□ -0.87
USP44-202ENST00000393091 OR4B1Q8NGF8 309 aa9.6□□□□□ -0.87
USP44-202ENST00000393091 NDUFAF3Q9BU61 184 aa9.6□□□□□ -0.87
USP44-202ENST00000393091 GOLT1BQ9Y3E0 138 aa9.6□□□□□ -0.87
USP44-202ENST00000393091 DNAH7Q8WXX0 4024 aa9.6□□□□□ -0.87
USP44-202ENST00000393091 TOR2AQ5JU69 321 aa9.6□□□□□ -0.87
USP44-202ENST00000393091 TMEM189A5PLL7 270 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 PFN1P07737 140 aaKnown RBP9.59□□□□□ -0.87
USP44-202ENST00000393091 SMUG1Q53HV7 270 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 UBE2G1P62253 170 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 SPINK13Q1W4C9 94 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 C10orf91Q5T1B1 145 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 IBA57Q5T440 356 aaKnown RBP9.59□□□□□ -0.87
USP44-202ENST00000393091 ZNF575Q86XF7 245 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 Q8NAQ8 132 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 LINC00479Q96M42 142 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 TRAV8-1A0A0A6YYK1 113 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 TRAV21A0A0B4J279 112 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 C19orf71A6NCJ1 209 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 ZNF493Q6ZR52 646 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 FAM231DQ6ZW35 169 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 TREM1Q9NP99 234 aa9.59□□□□□ -0.87
USP44-202ENST00000393091 TRBV20OR9-2A0A075B6H5 130 aa9.58□□□□□ -0.88
USP44-202ENST00000393091 A0A1B0GV50 99 aa9.58□□□□□ -0.88
USP44-202ENST00000393091 GCGP01275 180 aa9.58□□□□□ -0.88
USP44-202ENST00000393091 LINC01559Q495D7 138 aa9.58□□□□□ -0.88
USP44-202ENST00000393091 PIK3CD-AS1Q5SR53 167 aa9.58□□□□□ -0.88
USP44-202ENST00000393091 LINC00612Q8N6U2 182 aa9.58□□□□□ -0.88
USP44-202ENST00000393091 C18orf15Q96N68 181 aa9.58□□□□□ -0.88
USP44-202ENST00000393091 PARLQ9H300 379 aa9.58□□□□□ -0.88
USP44-202ENST00000393091 M0R2Z0 102 aa9.58□□□□□ -0.88
USP44-202ENST00000393091 CRIP1P50238 77 aa9.58□□□□□ -0.88
USP44-202ENST00000393091 NOTCH3Q9UM47 2321 aa9.58□□□□□ -0.88
USP44-202ENST00000393091 PLAC8L1A1L4L8 177 aa9.57□□□□□ -0.88
USP44-202ENST00000393091 C9JQL5 133 aa9.57□□□□□ -0.88
USP44-202ENST00000393091 MED14OSP0DP75 135 aa9.57□□□□□ -0.88
USP44-202ENST00000393091 Q8TAT8 98 aa9.57□□□□□ -0.88
USP44-202ENST00000393091 ZC2HC1AQ96GY0 325 aa9.57□□□□□ -0.88
USP44-202ENST00000393091 EIF5A2Q9GZV4 153 aaKnown RBP9.57□□□□□ -0.88
USP44-202ENST00000393091 GPX1P07203 203 aa9.57□□□□□ -0.88
USP44-202ENST00000393091 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
USP44-202ENST00000393091 PRNTQ86SH4 94 aa9.57□□□□□ -0.88
USP44-202ENST00000393091 C8orf49Q96NF6 230 aa9.57□□□□□ -0.88
USP44-202ENST00000393091 ZMAT4Q9H898 229 aa9.57□□□□□ -0.88
USP44-202ENST00000393091 TEX48A0A1B0GUV7 120 aa9.57□□□□□ -0.88
USP44-202ENST00000393091 ZNF80P51504 273 aaPredicted RBP9.57□□□□□ -0.88
USP44-202ENST00000393091 DEFB121Q5J5C9 76 aa9.57□□□□□ -0.88
USP44-202ENST00000393091 RNASE8Q8TDE3 154 aaKnown RBP9.57□□□□□ -0.88
USP44-202ENST00000393091 DERL1Q9BUN8 251 aa9.57□□□□□ -0.88
USP44-202ENST00000393091 TRAV34A0A0B4J273 112 aa9.56□□□□□ -0.88
USP44-202ENST00000393091 FABP5P3A8MUU1 101 aa9.56□□□□□ -0.88
USP44-202ENST00000393091 BTN1A1Q13410 526 aa9.56□□□□□ -0.88
USP44-202ENST00000393091 CENPWQ5EE01 88 aa9.56□□□□□ -0.88
USP44-202ENST00000393091 FAM162BQ5T6X4 162 aa9.56□□□□□ -0.88
USP44-202ENST00000393091 C11orf72Q8NBR9 251 aa9.56□□□□□ -0.88
USP44-202ENST00000393091 C16orf74Q96GX8 76 aa9.56□□□□□ -0.88
USP44-202ENST00000393091 KCNS1Q96KK3 526 aa9.56□□□□□ -0.88
USP44-202ENST00000393091 NIPSNAP3BQ9BS92 247 aa9.56□□□□□ -0.88
USP44-202ENST00000393091 XCL2Q9UBD3 114 aa9.56□□□□□ -0.88
USP44-202ENST00000393091 BAGE2Q86Y30 109 aa9.56□□□□□ -0.88
USP44-202ENST00000393091 TMEM263Q8WUH6 116 aaKnown RBP9.56□□□□□ -0.88
USP44-202ENST00000393091 DAZ2Q13117 558 aaKnown RBP9.55□□□□□ -0.88
USP44-202ENST00000393091 IGHV1OR15-1A0A075B7D0 117 aa9.55□□□□□ -0.88
USP44-202ENST00000393091 KRBOX1C9JBD0 128 aa9.55□□□□□ -0.88
USP44-202ENST00000393091 GNG4P50150 75 aa9.55□□□□□ -0.88
USP44-202ENST00000393091 KIR3DS1Q14943 382 aa9.55□□□□□ -0.88
USP44-202ENST00000393091 CT83Q5H943 113 aa9.55□□□□□ -0.88
USP44-202ENST00000393091 RPH3ALQ9UNE2 315 aa9.55□□□□□ -0.88
USP44-202ENST00000393091 RNASE4P34096 147 aaKnown RBP9.54□□□□□ -0.88
USP44-202ENST00000393091 SCRT2Q9NQ03 307 aa9.54□□□□□ -0.88
USP44-202ENST00000393091 IGKV3-20P01619 116 aa9.54□□□□□ -0.88
USP44-202ENST00000393091 DEFB135Q30KP9 77 aa9.54□□□□□ -0.88
USP44-202ENST00000393091 PCNPQ8WW12 178 aaKnown RBP9.54□□□□□ -0.88
USP44-202ENST00000393091 OR11H2Q8NH07 326 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 C11orf21Q9P2W6 132 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 NAT8Q9UHE5 227 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 COL7A1Q02388 2944 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 TRGV11A0A075B6L2 103 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 TRAV12-2A0A075B6T6 113 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 K7EN84 100 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 LINC01551Q86U37 167 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 C9orf85Q96MD7 179 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 EDA2RQ9HAV5 297 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 LYRM9A8MSI8 78 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 SH2D1AO60880 128 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 FXYD7P58549 80 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms