RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ZNF492Q9P255 531 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 VPS13DQ5THJ4 4388 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 TRAV10A0A0B4J240 114 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 CTXND1A0A1B0GTU2 59 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 TEX48A0A1B0GUV7 120 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 C7orf71A4D174 169 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 RBAKDNA6NC62 111 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 H7BYZ3 331 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 SLC25A5P05141 298 aaKnown RBP6.6□□□□□ -1.35
HMGN1-202ENST00000380747 GPX1P07203 203 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 RNASE4P34096 147 aaKnown RBP6.6□□□□□ -1.35
HMGN1-202ENST00000380747 GNG5P63218 68 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 BTN1A1Q13410 526 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 ZNF726P1Q15940 193 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 GOLT1AQ6ZVE7 132 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 AKAP14Q86UN6 197 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 CCDC28AQ8IWP9 274 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 TCTE3Q8IZS6 198 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 C2CD4CQ8TF44 421 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 LINC00476Q8WZB0 136 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 FAM19A4Q96LR4 140 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 NIPSNAP3BQ9BS92 247 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 TMEM167BQ9NRX6 74 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 DKK2Q9UBU2 259 aa6.6□□□□□ -1.35
HMGN1-202ENST00000380747 DEFB131BA0A096LNP1 70 aa6.59□□□□□ -1.35
HMGN1-202ENST00000380747 IGLL5B9A064 214 aa6.59□□□□□ -1.35
HMGN1-202ENST00000380747 C11orf94C9JXX5 98 aa6.59□□□□□ -1.35
HMGN1-202ENST00000380747 CRISP2P16562 243 aa6.59□□□□□ -1.35
HMGN1-202ENST00000380747 FGF8P55075 233 aaPredicted RBP6.59□□□□□ -1.35
HMGN1-202ENST00000380747 EIF5AP63241 154 aaKnown RBP6.59□□□□□ -1.35
HMGN1-202ENST00000380747 CD300CQ08708 224 aa6.59□□□□□ -1.35
HMGN1-202ENST00000380747 SUN5Q8TC36 379 aa6.59□□□□□ -1.35
HMGN1-202ENST00000380747 TMPRSS5Q9H3S3 457 aa6.59□□□□□ -1.35
HMGN1-202ENST00000380747 MAP1LC3B2A6NCE7 125 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 KLLNB2CW77 178 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 SEC11BP0C7V7 166 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 DEFB130BP0DP73 79 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 DEFB130AP0DP74 79 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 HTN3P15516 51 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 UBE2G2P60604 165 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 DAD1P61803 113 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 PRR9Q5T870 116 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 ZFAND2AQ8N6M9 145 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 NUDT10Q8NFP7 164 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 STOML3Q8TAV4 291 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 FAM213BQ8TBF2 198 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 NUDT11Q96G61 164 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 C16orf74Q96GX8 76 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 PYGO2Q9BRQ0 406 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 MAP1LC3BQ9GZQ8 125 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 DNAH6Q9C0G6 4158 aa6.58□□□□□ -1.36
HMGN1-202ENST00000380747 PKHD1P08F94 4074 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 TRBV7-9A0A0J9YWB2 115 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 PLAC8L1A1L4L8 177 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 CBY3A6NI87 242 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 LYRM9A8MSI8 78 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 SNURFLB1AK76 121 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 GGTLC3B5MD39 225 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 C1QBP02746 253 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 NMBP08949 121 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 TPT1P13693 172 aaKnown RBP6.57□□□□□ -1.36
HMGN1-202ENST00000380747 ZNF493Q6ZR52 646 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 ARL6IP6Q8N6S5 226 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 C5orf17Q8NAS9 161 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 RNASE8Q8TDE3 154 aaKnown RBP6.57□□□□□ -1.36
HMGN1-202ENST00000380747 TMEM263Q8WUH6 116 aaKnown RBP6.57□□□□□ -1.36
HMGN1-202ENST00000380747 SGK494Q96LW2 274 aa6.57□□□□□ -1.36
HMGN1-202ENST00000380747 NOP10Q9NPE3 64 aaKnown RBP6.57□□□□□ -1.36
HMGN1-202ENST00000380747 TIMM8BQ9Y5J9 83 aaPredicted RBP6.57□□□□□ -1.36
HMGN1-202ENST00000380747 IGHV4-4A0A075B6R2 117 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 TRAV8-1A0A0A6YYK1 113 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 A0A1B0GV50 99 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 SERTM2A0A1B0GWG4 89 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 A0A1W2PRE2 83 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 UMAD1C9J7I0 102 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 F6UZH7 168 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 K7EQM0 130 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 ZNF324O75467 553 aaPredicted RBP6.56□□□□□ -1.36
HMGN1-202ENST00000380747 LY6G6CO95867 125 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 IFNA7P01567 189 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 TCRAP04437 139 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 FHITP49789 147 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 LGALSLQ3ZCW2 172 aaPredicted RBP6.56□□□□□ -1.36
HMGN1-202ENST00000380747 Q6ZQT7 251 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 EIF4E3Q8N5X7 224 aaKnown RBP6.56□□□□□ -1.36
HMGN1-202ENST00000380747 SFT2D1Q8WV19 159 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 TMED6Q8WW62 240 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 NDFIP1Q9BT67 221 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 EPDR1Q9UM22 224 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 LENEPQ9Y5L5 61 aa6.56□□□□□ -1.36
HMGN1-202ENST00000380747 FAT2Q9NYQ8 4349 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 IGHV1OR15-1A0A075B7D0 117 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 A0A1B0GVG6 124 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 LINC00310P59036 64 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 ZFP69Q49AA0 526 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 MUC21Q5SSG8 566 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 DPPA3Q6W0C5 159 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 ZNF680Q8NEM1 530 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 LINC00467Q9BRT7 94 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 ATG101Q9BSB4 218 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms