RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 CCL19Q99731 98 aa7.07□□□□□ -1.28
LIG3-202ENST00000378526 PCNX3Q9H6A9 2034 aa7.07□□□□□ -1.28
LIG3-202ENST00000378526 RPL15P61313 204 aaKnown RBP7.07□□□□□ -1.28
LIG3-202ENST00000378526 HIST2H2BCQ6DN03 193 aa7.07□□□□□ -1.28
LIG3-202ENST00000378526 HIST2H2BDQ6DRA6 164 aa7.07□□□□□ -1.28
LIG3-202ENST00000378526 IGLC6P0CF74 106 aa7.07□□□□□ -1.28
LIG3-202ENST00000378526 PRSS22Q9GZN4 317 aa7.07□□□□□ -1.28
LIG3-202ENST00000378526 IGKV4-1P06312 121 aa7.07□□□□□ -1.28
LIG3-202ENST00000378526 PCP2Q8IVA1 136 aa7.07□□□□□ -1.28
LIG3-202ENST00000378526 CEP192Q8TEP8 1941 aa7.06□□□□□ -1.28
LIG3-202ENST00000378526 C11orf52Q96A22 123 aa7.06□□□□□ -1.28
LIG3-202ENST00000378526 FAM110AQ9BQ89 295 aa7.06□□□□□ -1.28
LIG3-202ENST00000378526 J3QRE1 110 aa7.06□□□□□ -1.28
LIG3-202ENST00000378526 COX7CP15954 63 aa7.06□□□□□ -1.28
LIG3-202ENST00000378526 TMEM196Q5HYL7 178 aa7.06□□□□□ -1.28
LIG3-202ENST00000378526 PRR7Q8TB68 274 aa7.06□□□□□ -1.28
LIG3-202ENST00000378526 ACACAQ13085 2346 aa7.06□□□□□ -1.28
LIG3-202ENST00000378526 MT-ATP8P03928 68 aa7.06□□□□□ -1.28
LIG3-202ENST00000378526 SPACA3Q8IXA5 215 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 C11orf44Q8N8P7 122 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 IGHV3OR16-8A0A075B7F1 116 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 NTF4P34130 210 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 Q6ZS49 121 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 Q8TAT8 98 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 CACNA1HO95180 2353 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 OOSP1A8MZH6 123 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 MST1LQ2TV78 715 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 DEFB105AQ8NG35 78 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 SHANK2-AS3Q9BTD1 123 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 ARRDC1-AS1Q9H2J1 176 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 COLCA1Q6ZS62 124 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 ZCCHC24Q8N2G6 241 aaKnown RBP7.05□□□□□ -1.28
LIG3-202ENST00000378526 Q9H8V8 135 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 METRNQ9UJH8 293 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 WISP1O95388 367 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 ZNF576Q9H609 170 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 TRBV6-6A0A0A6YYG2 114 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 IGHV5-10-1A0A0J9YXX1 117 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 NXPH4O95158 308 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 CLUHP3Q96NS8 147 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 SND1-IT1Q9HBX3 110 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 ADAMTS9Q9P2N4 1935 aa7.05□□□□□ -1.28
LIG3-202ENST00000378526 ETDCA0A1B0GVM5 59 aa7.04□□□□□ -1.28
LIG3-202ENST00000378526 MLST8Q9BVC4 326 aa7.04□□□□□ -1.28
LIG3-202ENST00000378526 DSCAMO60469 2012 aa7.04□□□□□ -1.28
LIG3-202ENST00000378526 BPY2O14599 106 aa7.04□□□□□ -1.28
LIG3-202ENST00000378526 LOC101059948A0A1B0GTJ6 334 aa7.04□□□□□ -1.28
LIG3-202ENST00000378526 TMEM213A2RRL7 107 aa7.04□□□□□ -1.28
LIG3-202ENST00000378526 ATP5J2P56134 94 aa7.04□□□□□ -1.28
LIG3-202ENST00000378526 TEX36Q5VZQ5 186 aa7.04□□□□□ -1.28
LIG3-202ENST00000378526 TMEM14CQ9P0S9 112 aa7.04□□□□□ -1.28
LIG3-202ENST00000378526 NLRC5Q86WI3 1866 aa7.04□□□□□ -1.28
LIG3-202ENST00000378526 GAFA1Q96PS6 74 aa7.04□□□□□ -1.28
LIG3-202ENST00000378526 LINC01465Q8N7H1 131 aa7.04□□□□□ -1.28
LIG3-202ENST00000378526 CFHR1Q03591 330 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 LINC01619G3V211 115 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 COX6B1P14854 86 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 RPL18AQ02543 176 aaKnown RBP7.03□□□□□ -1.28
LIG3-202ENST00000378526 VWC2Q2TAL6 325 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 Q6P435 159 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 PRO0628Q9UI54 55 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 IGHV4-28A0A0C4DH34 117 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 C15orf62A8K5M9 175 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 FHL5Q5TD97 284 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 MINOS1Q5TGZ0 78 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 MINOS1-NBL1R4GNA1 71 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 FAM219BQ5XKK7 198 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 UNQ6494/PRO21346Q6UXR6 183 aa7.03□□□□□ -1.28
LIG3-202ENST00000378526 LHBP01229 141 aa7.02□□□□□ -1.29
LIG3-202ENST00000378526 LINC00694P0DN24 101 aa7.02□□□□□ -1.29
LIG3-202ENST00000378526 NDPQ00604 133 aa7.02□□□□□ -1.29
LIG3-202ENST00000378526 Q6Q795 121 aa7.02□□□□□ -1.29
LIG3-202ENST00000378526 IGHV3-11P01762 117 aa7.02□□□□□ -1.29
LIG3-202ENST00000378526 FXYD2P54710 66 aa7.02□□□□□ -1.29
LIG3-202ENST00000378526 FOXS1O43638 330 aa7.02□□□□□ -1.29
LIG3-202ENST00000378526 ZFP36L1Q07352 338 aaKnown RBP7.02□□□□□ -1.29
LIG3-202ENST00000378526 FAM19A3Q7Z5A8 133 aa7.02□□□□□ -1.29
LIG3-202ENST00000378526 DAZ1Q9NQZ3 744 aaKnown RBP7.02□□□□□ -1.29
LIG3-202ENST00000378526 ZNF134P52741 427 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 TECTAO75443 2155 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 PLXNA4Q9HCM2 1894 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 LYPD3O95274 346 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 WI2-2373I1.2A0A1W2PRP0 233 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 SDIM1Q6ZPB5 146 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 PSG7Q13046 419 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 PAQR4Q8N4S7 273 aaPredicted RBP7.01□□□□□ -1.29
LIG3-202ENST00000378526 LTAP01374 205 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 Q8N1Y9 231 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 CYYR1Q96J86 154 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 E9PLD3 99 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 IGKV1-5P01602 117 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 C8orf49Q96NF6 230 aa7.01□□□□□ -1.29
LIG3-202ENST00000378526 LYPD6Q86Y78 171 aa7□□□□□ -1.29
LIG3-202ENST00000378526 EFNA4P52798 201 aa7□□□□□ -1.29
LIG3-202ENST00000378526 STPG1Q5TH74 334 aa7□□□□□ -1.29
LIG3-202ENST00000378526 ZNF71Q9NQZ8 489 aaPredicted RBP7□□□□□ -1.29
LIG3-202ENST00000378526 CSDC2Q9Y534 153 aaKnown RBP7□□□□□ -1.29
LIG3-202ENST00000378526 CISD3P0C7P0 127 aa7□□□□□ -1.29
LIG3-202ENST00000378526 TRIP6Q15654 476 aaKnown RBP7□□□□□ -1.29
LIG3-202ENST00000378526 FAM168AQ92567 244 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms