RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 PAFAH1B2P68402 229 aa13.13□□□□□ -0.31
UBE3D-203ENST00000369747 SAPCD1Q5SSQ6 148 aa13.13□□□□□ -0.31
UBE3D-203ENST00000369747 C8orf86Q6ZUL3 223 aa13.13□□□□□ -0.31
UBE3D-203ENST00000369747 TRAV8-2A0A0B4J237 113 aa13.13□□□□□ -0.31
UBE3D-203ENST00000369747 PRR31Q5SQ13 230 aa13.13□□□□□ -0.31
UBE3D-203ENST00000369747 C4orf3Q8WVX3 66 aa13.13□□□□□ -0.31
UBE3D-203ENST00000369747 DUX3Q96PT4 197 aa13.13□□□□□ -0.31
UBE3D-203ENST00000369747 TSSC4Q9Y5U2 329 aaPredicted RBP13.13□□□□□ -0.31
UBE3D-203ENST00000369747 IGHV4OR15-8A0A075B7B6 117 aa13.12□□□□□ -0.31
UBE3D-203ENST00000369747 A0A087WW49 117 aa13.12□□□□□ -0.31
UBE3D-203ENST00000369747 SH2D1AO60880 128 aa13.12□□□□□ -0.31
UBE3D-203ENST00000369747 LURAP1LQ8IV03 231 aa13.12□□□□□ -0.31
UBE3D-203ENST00000369747 C18orf32Q8TCD1 76 aa13.12□□□□□ -0.31
UBE3D-203ENST00000369747 GLMPQ8WWB7 406 aa13.12□□□□□ -0.31
UBE3D-203ENST00000369747 WNK1Q9H4A3 2382 aa13.12□□□□□ -0.31
UBE3D-203ENST00000369747 ADARB2-AS1A8MUL3 147 aa13.11□□□□□ -0.31
UBE3D-203ENST00000369747 LINC00587B1AMM8 73 aa13.11□□□□□ -0.31
UBE3D-203ENST00000369747 ERCC8Q13216 396 aa13.11□□□□□ -0.31
UBE3D-203ENST00000369747 FAM162BQ5T6X4 162 aa13.11□□□□□ -0.31
UBE3D-203ENST00000369747 ALKBH7Q9BT30 221 aaPredicted RBP13.11□□□□□ -0.31
UBE3D-203ENST00000369747 RBAKDNA6NC62 111 aa13.11□□□□□ -0.31
UBE3D-203ENST00000369747 ZNF80P51504 273 aaPredicted RBP13.11□□□□□ -0.31
UBE3D-203ENST00000369747 FAM209BQ5JX69 171 aa13.11□□□□□ -0.31
UBE3D-203ENST00000369747 OR11H1Q8NG94 326 aa13.11□□□□□ -0.31
UBE3D-203ENST00000369747 KLF5Q13887 457 aaPredicted RBP13.1□□□□□ -0.31
UBE3D-203ENST00000369747 IQCJQ1A5X6 159 aa13.1□□□□□ -0.31
UBE3D-203ENST00000369747 Q6ZWC4 215 aa13.1□□□□□ -0.31
UBE3D-203ENST00000369747 KCNS1Q96KK3 526 aa13.1□□□□□ -0.31
UBE3D-203ENST00000369747 A0A1B0GUT8 65 aa13.09□□□□□ -0.31
UBE3D-203ENST00000369747 A0A1W2PS18 150 aa13.09□□□□□ -0.31
UBE3D-203ENST00000369747 ARMS2P0C7Q2 107 aa13.09□□□□□ -0.31
UBE3D-203ENST00000369747 NSUN5P1Q3KNT7 163 aa13.09□□□□□ -0.31
UBE3D-203ENST00000369747 TRRAPQ9Y4A5 3859 aa13.09□□□□□ -0.31
UBE3D-203ENST00000369747 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
UBE3D-203ENST00000369747 HOXD3P31249 432 aaPredicted RBP13.09□□□□□ -0.31
UBE3D-203ENST00000369747 MRPL53Q96EL3 112 aaKnown RBP13.09□□□□□ -0.31
UBE3D-203ENST00000369747 RAX2Q96IS3 184 aa13.09□□□□□ -0.31
UBE3D-203ENST00000369747 SAMD10Q9BYL1 202 aa13.09□□□□□ -0.31
UBE3D-203ENST00000369747 GPX1P07203 203 aa13.08□□□□□ -0.32
UBE3D-203ENST00000369747 OR1N2Q8NGR9 330 aa13.08□□□□□ -0.32
UBE3D-203ENST00000369747 SLURP1P55000 103 aa13.07□□□□□ -0.32
UBE3D-203ENST00000369747 Q6AWC8 147 aa13.07□□□□□ -0.32
UBE3D-203ENST00000369747 TMSB15BA0A087X1C1 80 aa13.07□□□□□ -0.32
UBE3D-203ENST00000369747 CD33P20138 364 aa13.07□□□□□ -0.32
UBE3D-203ENST00000369747 RIGQ13278 110 aa13.07□□□□□ -0.32
UBE3D-203ENST00000369747 GPHB5Q86YW7 130 aa13.07□□□□□ -0.32
UBE3D-203ENST00000369747 GATD1Q8NB37 220 aa13.07□□□□□ -0.32
UBE3D-203ENST00000369747 CITED1Q99966 193 aa13.07□□□□□ -0.32
UBE3D-203ENST00000369747 NDFIP1Q9BT67 221 aa13.07□□□□□ -0.32
UBE3D-203ENST00000369747 AGPAT4-IT1Q9H0P7 198 aa13.07□□□□□ -0.32
UBE3D-203ENST00000369747 LINC01619G3V211 115 aa13.06□□□□□ -0.32
UBE3D-203ENST00000369747 BMI1P35226 326 aa13.06□□□□□ -0.32
UBE3D-203ENST00000369747 SYNJ2BPP57105 145 aa13.06□□□□□ -0.32
UBE3D-203ENST00000369747 ZNF575Q86XF7 245 aa13.06□□□□□ -0.32
UBE3D-203ENST00000369747 DPF1Q92782 380 aa13.06□□□□□ -0.32
UBE3D-203ENST00000369747 LOC102724200A0A096LPH7 203 aaPredicted RBP13.05□□□□□ -0.32
UBE3D-203ENST00000369747 CCL24O00175 119 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 ZNF324O75467 553 aaPredicted RBP13.05□□□□□ -0.32
UBE3D-203ENST00000369747 SCGB1D1O95968 90 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 NDUFA11Q86Y39 141 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 TMEM158Q8WZ71 300 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 C16orf92Q96LL3 132 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 TPPP3Q9BW30 176 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 PMCHP20382 165 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 EDN2P20800 178 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 AMTP48728 403 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 FAM106AQ4KMX7 169 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 TM4SF20Q53R12 229 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 LYZL1Q6UWQ5 148 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 C20orf173Q96LM9 149 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 NAGKQ9UJ70 344 aa13.05□□□□□ -0.32
UBE3D-203ENST00000369747 A0A1B0GW15 77 aa13.04□□□□□ -0.32
UBE3D-203ENST00000369747 PKIAP61925 76 aa13.04□□□□□ -0.32
UBE3D-203ENST00000369747 FHL3Q13643 280 aa13.04□□□□□ -0.32
UBE3D-203ENST00000369747 C9orf47Q6ZRZ4 202 aa13.04□□□□□ -0.32
UBE3D-203ENST00000369747 CLEC5AQ9NY25 188 aa13.04□□□□□ -0.32
UBE3D-203ENST00000369747 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
UBE3D-203ENST00000369747 FABP5P3A8MUU1 101 aa13.03□□□□□ -0.32
UBE3D-203ENST00000369747 SOCS3O14543 225 aa13.03□□□□□ -0.32
UBE3D-203ENST00000369747 DLX4Q92988 240 aaPredicted RBP13.03□□□□□ -0.32
UBE3D-203ENST00000369747 PRO1933Q9H354 126 aa13.03□□□□□ -0.32
UBE3D-203ENST00000369747 NRN1Q9NPD7 142 aa13.03□□□□□ -0.32
UBE3D-203ENST00000369747 ZNF138P52744 262 aa13.03□□□□□ -0.32
UBE3D-203ENST00000369747 RPS20P60866 119 aaKnown RBP13.03□□□□□ -0.32
UBE3D-203ENST00000369747 TMEM78Q5T7P6 136 aa13.03□□□□□ -0.32
UBE3D-203ENST00000369747 NIT1Q86X76 327 aa13.03□□□□□ -0.32
UBE3D-203ENST00000369747 FAM19A2Q8N3H0 131 aa13.03□□□□□ -0.32
UBE3D-203ENST00000369747 ZNF664Q8N3J9 261 aa13.03□□□□□ -0.32
UBE3D-203ENST00000369747 URB1-AS1Q96HZ7 61 aa13.03□□□□□ -0.32
UBE3D-203ENST00000369747 DAZ1Q9NQZ3 744 aaKnown RBP13.03□□□□□ -0.32
UBE3D-203ENST00000369747 BORCS7Q96B45 105 aa13.02□□□□□ -0.32
UBE3D-203ENST00000369747 RHPN1-AS1Q9BWJ2 59 aa13.02□□□□□ -0.32
UBE3D-203ENST00000369747 PPP1R14DQ9NXH3 145 aa13.02□□□□□ -0.32
UBE3D-203ENST00000369747 IGLC6P0CF74 106 aa13.01□□□□□ -0.33
UBE3D-203ENST00000369747 CTRLP40313 264 aa13.01□□□□□ -0.33
UBE3D-203ENST00000369747 ZNF493Q6ZR52 646 aa13.01□□□□□ -0.33
UBE3D-203ENST00000369747 TMEM213A2RRL7 107 aa13.01□□□□□ -0.33
UBE3D-203ENST00000369747 ORM1P02763 201 aa13.01□□□□□ -0.33
UBE3D-203ENST00000369747 LINC01559Q495D7 138 aa13.01□□□□□ -0.33
UBE3D-203ENST00000369747 C3orf56Q8N813 242 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms