RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 MBD6Q96DN6 1003 aa8.27□□□□□ -1.08
PRDM1-201ENST00000369089 SIRPDQ9H106 197 aa8.27□□□□□ -1.08
PRDM1-201ENST00000369089 RPUSD1Q9UJJ7 312 aaKnown RBP8.27□□□□□ -1.08
PRDM1-201ENST00000369089 RPL18AQ02543 176 aaKnown RBP8.27□□□□□ -1.09
PRDM1-201ENST00000369089 FXYD5Q96DB9 178 aa8.27□□□□□ -1.09
PRDM1-201ENST00000369089 AJUBAQ96IF1 538 aa8.27□□□□□ -1.09
PRDM1-201ENST00000369089 THADAQ6YHU6 1953 aa8.27□□□□□ -1.09
PRDM1-201ENST00000369089 TMEM105Q8N8V8 129 aa8.27□□□□□ -1.09
PRDM1-201ENST00000369089 METTL26Q96S19 204 aa8.27□□□□□ -1.09
PRDM1-201ENST00000369089 DYSFO75923 2080 aa8.27□□□□□ -1.09
PRDM1-201ENST00000369089 TRAV12-1A0A0B4J245 112 aa8.27□□□□□ -1.09
PRDM1-201ENST00000369089 IGLV2-8P01709 118 aa8.27□□□□□ -1.09
PRDM1-201ENST00000369089 PSMB8P28062 276 aa8.27□□□□□ -1.09
PRDM1-201ENST00000369089 DCTN5Q9BTE1 182 aa8.27□□□□□ -1.09
PRDM1-201ENST00000369089 WNT9BO14905 357 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 LOXL1Q08397 574 aaPredicted RBP8.26□□□□□ -1.09
PRDM1-201ENST00000369089 PVRIGQ6DKI7 326 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 Q6P435 159 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 SMIM2Q9BVW6 85 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 ZNF837Q96EG3 531 aaPredicted RBP8.26□□□□□ -1.09
PRDM1-201ENST00000369089 INTS1Q8N201 2190 aaKnown RBP8.26□□□□□ -1.09
PRDM1-201ENST00000369089 IGKV2-40A0A087WW87 121 aaPredicted RBP8.26□□□□□ -1.09
PRDM1-201ENST00000369089 A0A0U1RRA0 63 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 PRR19A6NJB7 356 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 VCYO14598 125 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 IGKV2D-40P01614 121 aaPredicted RBP8.26□□□□□ -1.09
PRDM1-201ENST00000369089 SAA2P0DJI9 122 aaPredicted RBP8.26□□□□□ -1.09
PRDM1-201ENST00000369089 MLANAQ16655 118 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 KLHL30-AS1Q8NEE0 82 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 DPH3P1Q9H4G8 78 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 KIAA2026Q5HYC2 2103 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 COL6A6A6NMZ7 2263 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 RHOHQ15669 191 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 SLC25A29Q8N8R3 303 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 SERP1Q9Y6X1 66 aa8.26□□□□□ -1.09
PRDM1-201ENST00000369089 TRAV12-2A0A075B6T6 113 aa8.25□□□□□ -1.09
PRDM1-201ENST00000369089 CD28P10747 220 aa8.25□□□□□ -1.09
PRDM1-201ENST00000369089 C4orf26Q17RF5 130 aa8.25□□□□□ -1.09
PRDM1-201ENST00000369089 MLST8Q9BVC4 326 aa8.25□□□□□ -1.09
PRDM1-201ENST00000369089 RNF7Q9UBF6 113 aa8.25□□□□□ -1.09
PRDM1-201ENST00000369089 P0DMU3 169 aa8.25□□□□□ -1.09
PRDM1-201ENST00000369089 FAM231AP0DMU4 169 aa8.25□□□□□ -1.09
PRDM1-201ENST00000369089 FAM231CP0DMU5 169 aa8.25□□□□□ -1.09
PRDM1-201ENST00000369089 MUSTN1Q8IVN3 82 aa8.25□□□□□ -1.09
PRDM1-201ENST00000369089 MPLKIPQ8TAP9 179 aa8.25□□□□□ -1.09
PRDM1-201ENST00000369089 M0R1W7 72 aa8.25□□□□□ -1.09
PRDM1-201ENST00000369089 ITLN1Q8WWA0 313 aa8.25□□□□□ -1.09
PRDM1-201ENST00000369089 LINC01619G3V211 115 aa8.24□□□□□ -1.09
PRDM1-201ENST00000369089 ANAPC1Q9H1A4 1944 aa8.24□□□□□ -1.09
PRDM1-201ENST00000369089 ALPK3Q96L96 1907 aa8.24□□□□□ -1.09
PRDM1-201ENST00000369089 LINC00205P59089 165 aa8.24□□□□□ -1.09
PRDM1-201ENST00000369089 DTX1Q86Y01 620 aa8.24□□□□□ -1.09
PRDM1-201ENST00000369089 MAPKAPK5-AS1Q8N8E1 139 aa8.24□□□□□ -1.09
PRDM1-201ENST00000369089 VSIG2Q96IQ7 327 aa8.24□□□□□ -1.09
PRDM1-201ENST00000369089 AGPAT4-IT1Q9H0P7 198 aa8.24□□□□□ -1.09
PRDM1-201ENST00000369089 TP53TG1Q9Y2A0 90 aa8.24□□□□□ -1.09
PRDM1-201ENST00000369089 C16orf97H3BN30 126 aa8.24□□□□□ -1.09
PRDM1-201ENST00000369089 ZNF295-AS1Q8N0V1 137 aa8.24□□□□□ -1.09
PRDM1-201ENST00000369089 ARHGAP21Q5T5U3 1957 aa8.23□□□□□ -1.09
PRDM1-201ENST00000369089 LEPROTO15243 131 aa8.23□□□□□ -1.09
PRDM1-201ENST00000369089 BDP1A6H8Y1 2624 aa8.23□□□□□ -1.09
PRDM1-201ENST00000369089 IGHV3-72A0A0B4J1Y9 119 aa8.23□□□□□ -1.09
PRDM1-201ENST00000369089 TIMM17BO60830 172 aa8.23□□□□□ -1.09
PRDM1-201ENST00000369089 FDCSPQ8NFU4 85 aa8.23□□□□□ -1.09
PRDM1-201ENST00000369089 PRB4P10163 310 aaPredicted RBP8.23□□□□□ -1.09
PRDM1-201ENST00000369089 PHF3Q92576 2039 aaKnown RBP8.23□□□□□ -1.09
PRDM1-201ENST00000369089 OVOL1O14753 267 aa8.23□□□□□ -1.09
PRDM1-201ENST00000369089 PLA2G5P39877 138 aa8.23□□□□□ -1.09
PRDM1-201ENST00000369089 TMEM14BQ9NUH8 114 aa8.23□□□□□ -1.09
PRDM1-201ENST00000369089 HAMPP81172 84 aa8.22□□□□□ -1.09
PRDM1-201ENST00000369089 MED12LQ86YW9 2145 aa8.22□□□□□ -1.09
PRDM1-201ENST00000369089 ZCCHC24Q8N2G6 241 aaKnown RBP8.22□□□□□ -1.09
PRDM1-201ENST00000369089 RASL10AQ92737 203 aa8.22□□□□□ -1.09
PRDM1-201ENST00000369089 EEF1AKMT3Q96AZ1 226 aa8.22□□□□□ -1.09
PRDM1-201ENST00000369089 NTN3O00634 580 aaPredicted RBP8.22□□□□□ -1.09
PRDM1-201ENST00000369089 SP5Q6BEB4 398 aaPredicted RBP8.22□□□□□ -1.09
PRDM1-201ENST00000369089 Q8TAT8 98 aa8.22□□□□□ -1.09
PRDM1-201ENST00000369089 C8orf49Q96NF6 230 aa8.22□□□□□ -1.09
PRDM1-201ENST00000369089 TMEM133Q9H2Q1 129 aa8.22□□□□□ -1.09
PRDM1-201ENST00000369089 TRBV7-3A0A075B6L6 115 aa8.22□□□□□ -1.09
PRDM1-201ENST00000369089 NDUFA12Q9UI09 145 aa8.22□□□□□ -1.09
PRDM1-201ENST00000369089 PCNX1Q96RV3 2341 aa8.22□□□□□ -1.09
PRDM1-201ENST00000369089 IGLV3-1P01715 115 aa8.21□□□□□ -1.09
PRDM1-201ENST00000369089 ATP5EP56381 51 aaPredicted RBP8.21□□□□□ -1.09
PRDM1-201ENST00000369089 SDIM1Q6ZPB5 146 aa8.21□□□□□ -1.09
PRDM1-201ENST00000369089 CLEC2BQ92478 149 aa8.21□□□□□ -1.09
PRDM1-201ENST00000369089 URB1-AS1Q96HZ7 61 aa8.21□□□□□ -1.09
PRDM1-201ENST00000369089 C19orf71A6NCJ1 209 aa8.21□□□□□ -1.1
PRDM1-201ENST00000369089 LY6G5BQ8NDX9 201 aa8.21□□□□□ -1.1
PRDM1-201ENST00000369089 PRSS22Q9GZN4 317 aa8.21□□□□□ -1.1
PRDM1-201ENST00000369089 FRMPD3Q5JV73 1810 aa8.21□□□□□ -1.1
PRDM1-201ENST00000369089 DOCK7Q96N67 2140 aa8.21□□□□□ -1.1
PRDM1-201ENST00000369089 BRI3O95415 125 aa8.21□□□□□ -1.1
PRDM1-201ENST00000369089 COX7A1P24310 79 aa8.21□□□□□ -1.1
PRDM1-201ENST00000369089 MRPS36P82909 103 aaKnown RBP8.21□□□□□ -1.1
PRDM1-201ENST00000369089 FAM90A1Q86YD7 464 aa8.21□□□□□ -1.1
PRDM1-201ENST00000369089 DIDO1Q9BTC0 2240 aaKnown RBP8.2□□□□□ -1.1
PRDM1-201ENST00000369089 USP17L23D6RBM5 183 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 F6UB75 175 aa8.2□□□□□ -1.1
PRDM1-201ENST00000369089 PSPNO60542 156 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms