RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 FOXE3Q13461 319 aa10.18□□□□□ -0.78
PTPRK-207ENST00000368226 FAM104BQ5XKR9 115 aa10.18□□□□□ -0.78
PTPRK-207ENST00000368226 Q6ZQT7 251 aa10.18□□□□□ -0.78
PTPRK-207ENST00000368226 THAP8Q8NA92 274 aa10.18□□□□□ -0.78
PTPRK-207ENST00000368226 ANGP03950 147 aaKnown RBP10.17□□□□□ -0.78
PTPRK-207ENST00000368226 HLA-DRB4P13762 266 aa10.17□□□□□ -0.78
PTPRK-207ENST00000368226 ZNF48Q96MX3 618 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-207ENST00000368226 MRPL27Q9P0M9 148 aaKnown RBP10.17□□□□□ -0.78
PTPRK-207ENST00000368226 ANAPC10Q9UM13 185 aa10.17□□□□□ -0.78
PTPRK-207ENST00000368226 HLA-DRB4X5D2U9 266 aa10.17□□□□□ -0.78
PTPRK-207ENST00000368226 TSSC4Q9Y5U2 329 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-207ENST00000368226 SLAQ13239 276 aa10.17□□□□□ -0.78
PTPRK-207ENST00000368226 KIR3DS1Q14943 382 aa10.17□□□□□ -0.78
PTPRK-207ENST00000368226 ZFHX2Q9C0A1 2572 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-207ENST00000368226 FXYD5Q96DB9 178 aa10.17□□□□□ -0.78
PTPRK-207ENST00000368226 TMEM243Q9BU79 118 aa10.17□□□□□ -0.78
PTPRK-207ENST00000368226 ESM1Q9NQ30 184 aa10.17□□□□□ -0.78
PTPRK-207ENST00000368226 CFPP27918 469 aa10.17□□□□□ -0.78
PTPRK-207ENST00000368226 VWC2Q2TAL6 325 aa10.17□□□□□ -0.78
PTPRK-207ENST00000368226 DYNAPQ8N1N2 210 aa10.17□□□□□ -0.78
PTPRK-207ENST00000368226 C1orf194Q5T5A4 169 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 ATP6V0BQ99437 205 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 Q9HAA7 133 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 ZNF492Q9P255 531 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 PYY3Q5JQD4 70 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 C18orf32Q8TCD1 76 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 DENND4CQ5VZ89 1909 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 CENPVL3A0A0U1RRI6 287 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 RHODO00212 210 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 ELANEP08246 267 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 ZNF491Q8N8L2 437 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 ZMAT4Q9H898 229 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 KAAG1Q9UBP8 84 aa10.16□□□□□ -0.78
PTPRK-207ENST00000368226 SPINK8P0C7L1 97 aa10.15□□□□□ -0.78
PTPRK-207ENST00000368226 ABCA1O95477 2261 aa10.15□□□□□ -0.78
PTPRK-207ENST00000368226 IGKV1OR2-108A0A075B7D4 117 aa10.15□□□□□ -0.78
PTPRK-207ENST00000368226 OCIAD2Q56VL3 154 aa10.15□□□□□ -0.78
PTPRK-207ENST00000368226 NUP210Q8TEM1 1887 aaPredicted RBP10.15□□□□□ -0.78
PTPRK-207ENST00000368226 GAGE2AQ6NT46 116 aa10.15□□□□□ -0.78
PTPRK-207ENST00000368226 MTURNQ8N3F0 131 aa10.15□□□□□ -0.78
PTPRK-207ENST00000368226 NKAPP1Q8N9T2 125 aa10.15□□□□□ -0.78
PTPRK-207ENST00000368226 IGLV3-1P01715 115 aa10.15□□□□□ -0.79
PTPRK-207ENST00000368226 Q8N8P6 123 aa10.15□□□□□ -0.79
PTPRK-207ENST00000368226 NCOR1P1Q9H4R4 102 aa10.15□□□□□ -0.79
PTPRK-207ENST00000368226 IGLC7A0M8Q6 106 aa10.14□□□□□ -0.79
PTPRK-207ENST00000368226 NPYP01303 97 aa10.14□□□□□ -0.79
PTPRK-207ENST00000368226 CFHR4Q92496 578 aa10.14□□□□□ -0.79
PTPRK-207ENST00000368226 V9GYV3 84 aa10.14□□□□□ -0.79
PTPRK-207ENST00000368226 LINC01559Q495D7 138 aa10.14□□□□□ -0.79
PTPRK-207ENST00000368226 TMEM190Q8WZ59 177 aa10.14□□□□□ -0.79
PTPRK-207ENST00000368226 U3KQE9 123 aa10.14□□□□□ -0.79
PTPRK-207ENST00000368226 ADAMTS9Q9P2N4 1935 aa10.14□□□□□ -0.79
PTPRK-207ENST00000368226 PRSS29PA6NIE9 313 aa10.13□□□□□ -0.79
PTPRK-207ENST00000368226 ZGRF1Q86YA3 2104 aa10.13□□□□□ -0.79
PTPRK-207ENST00000368226 LGALS1P09382 135 aaKnown RBP10.13□□□□□ -0.79
PTPRK-207ENST00000368226 IGFL2Q6UWQ7 119 aa10.13□□□□□ -0.79
PTPRK-207ENST00000368226 IGKV2D-24A0A075B6R9 120 aa10.13□□□□□ -0.79
PTPRK-207ENST00000368226 ANAPC13Q9BS18 74 aa10.13□□□□□ -0.79
PTPRK-207ENST00000368226 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.13□□□□□ -0.79
PTPRK-207ENST00000368226 IGKV2-29A2NJV5 120 aaPredicted RBP10.13□□□□□ -0.79
PTPRK-207ENST00000368226 XCL1P47992 114 aa10.13□□□□□ -0.79
PTPRK-207ENST00000368226 ZNF664Q8N3J9 261 aa10.13□□□□□ -0.79
PTPRK-207ENST00000368226 C9JAW5 83 aa10.13□□□□□ -0.79
PTPRK-207ENST00000368226 TMEM14CQ9P0S9 112 aa10.13□□□□□ -0.79
PTPRK-207ENST00000368226 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.12□□□□□ -0.794e-9■■■□□ 18
PTPRK-207ENST00000368226 IGHV1-24A0A0C4DH33 117 aa10.12□□□□□ -0.79
PTPRK-207ENST00000368226 DLX4Q92988 240 aaPredicted RBP10.12□□□□□ -0.79
PTPRK-207ENST00000368226 COL4A3Q01955 1670 aa10.12□□□□□ -0.79
PTPRK-207ENST00000368226 SEM1Q6ZVN7 128 aa10.12□□□□□ -0.79
PTPRK-207ENST00000368226 SIGLEC8Q9NYZ4 499 aa10.12□□□□□ -0.79
PTPRK-207ENST00000368226 ZFP36P26651 326 aaKnown RBP10.11□□□□□ -0.79
PTPRK-207ENST00000368226 AJUBAQ96IF1 538 aa10.11□□□□□ -0.79
PTPRK-207ENST00000368226 CACNA1HO95180 2353 aa10.11□□□□□ -0.79
PTPRK-207ENST00000368226 IGHV7-81A0A0B4J1V7 117 aa10.11□□□□□ -0.79
PTPRK-207ENST00000368226 LHBP01229 141 aa10.11□□□□□ -0.79
PTPRK-207ENST00000368226 TRAV25A0A0B4J276 109 aa10.11□□□□□ -0.79
PTPRK-207ENST00000368226 DEFB4AO15263 64 aa10.11□□□□□ -0.79
PTPRK-207ENST00000368226 GAGE2EQ4V326 116 aa10.11□□□□□ -0.79
PTPRK-207ENST00000368226 MRPL53Q96EL3 112 aaKnown RBP10.11□□□□□ -0.79
PTPRK-207ENST00000368226 GAGE2DQ9UEU5 116 aa10.11□□□□□ -0.79
PTPRK-207ENST00000368226 GTF3C1Q12789 2109 aa10.11□□□□□ -0.79
PTPRK-207ENST00000368226 TMEM141Q96I45 108 aa10.11□□□□□ -0.79
PTPRK-207ENST00000368226 SNHG12Q9BXW3 62 aa10.11□□□□□ -0.79
PTPRK-207ENST00000368226 KLF12Q9Y4X4 402 aa10.11□□□□□ -0.79
PTPRK-207ENST00000368226 K7EN84 100 aa10.1□□□□□ -0.79
PTPRK-207ENST00000368226 DOCK11Q5JSL3 2073 aa10.1□□□□□ -0.79
PTPRK-207ENST00000368226 SMIM27A0A1W2PRY6 76 aa10.1□□□□□ -0.79
PTPRK-207ENST00000368226 PIFOQ8TCI5 191 aa10.1□□□□□ -0.79
PTPRK-207ENST00000368226 AGPAT4-IT1Q9H0P7 198 aa10.1□□□□□ -0.79
PTPRK-207ENST00000368226 POLR3KQ9Y2Y1 108 aaPredicted RBP10.1□□□□□ -0.79
PTPRK-207ENST00000368226 GP9P14770 177 aa10.1□□□□□ -0.79
PTPRK-207ENST00000368226 FOXI2Q6ZQN5 318 aa10.1□□□□□ -0.79
PTPRK-207ENST00000368226 TMEM126AQ9H061 195 aa10.1□□□□□ -0.79
PTPRK-207ENST00000368226 EGR2P11161 476 aaPredicted RBP10.1□□□□□ -0.79
PTPRK-207ENST00000368226 OR11H6Q8NGC7 330 aa10.1□□□□□ -0.79
PTPRK-207ENST00000368226 C10orf105Q8TEF2 133 aa10.1□□□□□ -0.79
PTPRK-207ENST00000368226 WIPF2Q8TF74 440 aaPredicted RBP10.1□□□□□ -0.79
PTPRK-207ENST00000368226 IGHV4OR15-8A0A075B7B6 117 aa10.1□□□□□ -0.79
PTPRK-207ENST00000368226 A0A087WW49 117 aa10.1□□□□□ -0.79
PTPRK-207ENST00000368226 EDA2RQ9HAV5 297 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms