RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 DEFB130AP0DP74 79 aa6.99□□□□□ -1.29
CD48-202ENST00000368046 RNASE4P34096 147 aaKnown RBP6.99□□□□□ -1.29
CD48-202ENST00000368046 CD300CQ08708 224 aa6.99□□□□□ -1.29
CD48-202ENST00000368046 ZFAND2AQ8N6M9 145 aa6.99□□□□□ -1.29
CD48-202ENST00000368046 CMTM2Q8TAZ6 248 aa6.99□□□□□ -1.29
CD48-202ENST00000368046 RNASE8Q8TDE3 154 aaKnown RBP6.99□□□□□ -1.29
CD48-202ENST00000368046 LINC00467Q9BRT7 94 aa6.99□□□□□ -1.29
CD48-202ENST00000368046 NDUFAF3Q9BU61 184 aa6.99□□□□□ -1.29
CD48-202ENST00000368046 LENEPQ9Y5L5 61 aa6.99□□□□□ -1.29
CD48-202ENST00000368046 SNURFLB1AK76 121 aa6.98□□□□□ -1.29
CD48-202ENST00000368046 SMLR1H3BR10 107 aa6.98□□□□□ -1.29
CD48-202ENST00000368046 CXorf1O96002 111 aa6.98□□□□□ -1.29
CD48-202ENST00000368046 ARL14EPLP0DKL9 152 aa6.98□□□□□ -1.29
CD48-202ENST00000368046 ANXA2RQ3ZCQ2 193 aa6.98□□□□□ -1.29
CD48-202ENST00000368046 KCNRGQ8N5I3 272 aa6.98□□□□□ -1.29
CD48-202ENST00000368046 EIF4E3Q8N5X7 224 aaKnown RBP6.98□□□□□ -1.29
CD48-202ENST00000368046 TMED6Q8WW62 240 aa6.98□□□□□ -1.29
CD48-202ENST00000368046 NOP10Q9NPE3 64 aaKnown RBP6.98□□□□□ -1.29
CD48-202ENST00000368046 TMEM167BQ9NRX6 74 aa6.98□□□□□ -1.29
CD48-202ENST00000368046 A0A0D9SG52 128 aa6.97□□□□□ -1.29
CD48-202ENST00000368046 TMEM238LA0A1B0GVL6 79 aa6.97□□□□□ -1.29
CD48-202ENST00000368046 HTN3P15516 51 aa6.97□□□□□ -1.29
CD48-202ENST00000368046 GCHFRP30047 84 aa6.97□□□□□ -1.29
CD48-202ENST00000368046 SUMO1P63165 101 aaKnown RBP6.97□□□□□ -1.29
CD48-202ENST00000368046 BTN1A1Q13410 526 aa6.97□□□□□ -1.29
CD48-202ENST00000368046 ZNF345Q14585 488 aa6.97□□□□□ -1.29
CD48-202ENST00000368046 OR11H4Q8NGC9 324 aa6.97□□□□□ -1.29
CD48-202ENST00000368046 ST6GAL2Q96JF0 529 aa6.97□□□□□ -1.29
CD48-202ENST00000368046 ARPC5LQ9BPX5 153 aa6.97□□□□□ -1.29
CD48-202ENST00000368046 HYDINQ4G0P3 5121 aa6.96□□□□□ -1.29
CD48-202ENST00000368046 IGHV1OR15-1A0A075B7D0 117 aa6.96□□□□□ -1.3
CD48-202ENST00000368046 CTXND1A0A1B0GTU2 59 aa6.96□□□□□ -1.3
CD48-202ENST00000368046 SERTM2A0A1B0GWG4 89 aa6.96□□□□□ -1.3
CD48-202ENST00000368046 ATP5G1P05496 136 aa6.96□□□□□ -1.3
CD48-202ENST00000368046 ATP5G3P48201 142 aa6.96□□□□□ -1.3
CD48-202ENST00000368046 DAZ2Q13117 558 aaKnown RBP6.96□□□□□ -1.3
CD48-202ENST00000368046 AKR1C8PQ5T2L2 129 aa6.96□□□□□ -1.3
CD48-202ENST00000368046 GOLT1AQ6ZVE7 132 aa6.96□□□□□ -1.3
CD48-202ENST00000368046 ZNF680Q8NEM1 530 aa6.96□□□□□ -1.3
CD48-202ENST00000368046 Q8TAT8 98 aa6.96□□□□□ -1.3
CD48-202ENST00000368046 A0A1W2PRE2 83 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 RGS13O14921 159 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 SEC11BP0C7V7 166 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 P0DMU3 169 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 FAM231AP0DMU4 169 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 FAM231CP0DMU5 169 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 ZNF726P1Q15940 193 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 PRR9Q5T870 116 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 Q6AWC8 147 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 Q6ZQT7 251 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 SSX7Q7RTT5 188 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 LINC00612Q8N6U2 182 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 C5orf17Q8NAS9 161 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 GSN-AS1Q9NRJ2 163 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 EPDR1Q9UM22 224 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 RPH3ALQ9UNE2 315 aa6.95□□□□□ -1.3
CD48-202ENST00000368046 GAGE12BA1L429 117 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 F5H768 121 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 K7EQM0 130 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 GAGE7O76087 117 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 TCRAP04437 139 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 GAGE12FP0CL80 117 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 GAGE12GP0CL81 117 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 GAGE12IP0CL82 117 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 GNG5P63218 68 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 EIF5AP63241 154 aaKnown RBP6.94□□□□□ -1.3
CD48-202ENST00000368046 IBA57Q5T440 356 aaKnown RBP6.94□□□□□ -1.3
CD48-202ENST00000368046 TMEM88Q6PEY1 159 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 FAM159AQ6UWV7 190 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 Q6ZNX1 250 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 IQCF2Q8IXL9 164 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 C15orf53Q8NAA6 179 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 C11orf72Q8NBR9 251 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 NKX6-2Q9C056 277 aaPredicted RBP6.94□□□□□ -1.3
CD48-202ENST00000368046 TMPRSS5Q9H3S3 457 aa6.94□□□□□ -1.3
CD48-202ENST00000368046 TRAV8-1A0A0A6YYK1 113 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 KANTRA0A1W2PQU2 76 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 FBLL1A6NHQ2 334 aaKnown RBP6.93□□□□□ -1.3
CD48-202ENST00000368046 UMAD1C9J7I0 102 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 BCL2L11O43521 198 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 TCL1AP56279 114 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 TMUB2Q71RG4 321 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 POM121L12Q8N7R1 296 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 STOML3Q8TAV4 291 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 TVP23CQ96ET8 276 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 C18orf15Q96N68 181 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 ZNF471Q9BX82 626 aaPredicted RBP6.93□□□□□ -1.3
CD48-202ENST00000368046 TREM1Q9NP99 234 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 TP53TG3Q9ULZ0 132 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 PSG8Q9UQ74 426 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 KLF12Q9Y4X4 402 aa6.93□□□□□ -1.3
CD48-202ENST00000368046 TRAV21A0A0B4J279 112 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 GGTLC3B5MD39 225 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 SPINK4O60575 86 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 OR5I1Q13606 314 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 LGALS9BQ3B8N2 356 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 TDRG1Q3Y452 100 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 RNF212Q495C1 297 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 MUC21Q5SSG8 566 aa6.92□□□□□ -1.3
CD48-202ENST00000368046 SAPCD1Q5SSQ6 148 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms