RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 DAD1P61803 113 aa12.91□□□□□ -0.34
SHTN1-202ENST00000355371 WIPF2Q8TF74 440 aaPredicted RBP12.9□□□□□ -0.34
SHTN1-202ENST00000355371 TCF15Q12870 199 aa12.9□□□□□ -0.34
SHTN1-202ENST00000355371 GAGE2BQ13066 116 aa12.9□□□□□ -0.34
SHTN1-202ENST00000355371 GAGE2EQ4V326 116 aa12.9□□□□□ -0.34
SHTN1-202ENST00000355371 DNAJC30Q96LL9 226 aa12.9□□□□□ -0.34
SHTN1-202ENST00000355371 GAGE2DQ9UEU5 116 aa12.9□□□□□ -0.34
SHTN1-202ENST00000355371 TRAV12-2A0A075B6T6 113 aa12.9□□□□□ -0.34
SHTN1-202ENST00000355371 TRAV26-2A0A0B4J265 109 aa12.9□□□□□ -0.34
SHTN1-202ENST00000355371 IGLC2P0DOY2 106 aa12.9□□□□□ -0.34
SHTN1-202ENST00000355371 IGLC3P0DOY3 106 aa12.9□□□□□ -0.34
SHTN1-202ENST00000355371 LAMTOR3Q9UHA4 124 aa12.9□□□□□ -0.34
SHTN1-202ENST00000355371 VPREB3Q9UKI3 123 aa12.9□□□□□ -0.34
SHTN1-202ENST00000355371 K7EN84 100 aa12.89□□□□□ -0.35
SHTN1-202ENST00000355371 NPYP01303 97 aa12.89□□□□□ -0.35
SHTN1-202ENST00000355371 GRNP28799 593 aaKnown RBP12.89□□□□□ -0.35
SHTN1-202ENST00000355371 APOC4P55056 127 aa12.89□□□□□ -0.35
SHTN1-202ENST00000355371 SPRNQ5BIV9 151 aa12.89□□□□□ -0.35
SHTN1-202ENST00000355371 FOXI2Q6ZQN5 318 aa12.89□□□□□ -0.35
SHTN1-202ENST00000355371 IGHV3-16A0A0C4DH30 117 aa12.89□□□□□ -0.35
SHTN1-202ENST00000355371 CENPVL3A0A0U1RRI6 287 aa12.89□□□□□ -0.35
SHTN1-202ENST00000355371 EREGO14944 169 aa12.89□□□□□ -0.35
SHTN1-202ENST00000355371 TMEM243Q9BU79 118 aa12.89□□□□□ -0.35
SHTN1-202ENST00000355371 SPRY4Q9C004 299 aa12.89□□□□□ -0.35
SHTN1-202ENST00000355371 HLA-DRB4P13762 266 aa12.89□□□□□ -0.35
SHTN1-202ENST00000355371 HLA-DRB4X5D2U9 266 aa12.89□□□□□ -0.35
SHTN1-202ENST00000355371 USF3Q68DE3 2245 aa12.88□□□□□ -0.35
SHTN1-202ENST00000355371 PLXNB3Q9ULL4 1909 aa12.88□□□□□ -0.35
SHTN1-202ENST00000355371 PSCAO43653 123 aa12.88□□□□□ -0.35
SHTN1-202ENST00000355371 COX8AP10176 69 aa12.88□□□□□ -0.35
SHTN1-202ENST00000355371 DENND4CQ5VZ89 1909 aa12.88□□□□□ -0.35
SHTN1-202ENST00000355371 ZNRF2Q8NHG8 242 aa12.88□□□□□ -0.35
SHTN1-202ENST00000355371 ZFAND6Q6FIF0 208 aa12.87□□□□□ -0.35
SHTN1-202ENST00000355371 GAGE12BA1L429 117 aa12.87□□□□□ -0.35
SHTN1-202ENST00000355371 TRAV8-3A0A0A6YYJ7 113 aa12.87□□□□□ -0.35
SHTN1-202ENST00000355371 F5H768 121 aa12.87□□□□□ -0.35
SHTN1-202ENST00000355371 NDUFS7O75251 213 aa12.87□□□□□ -0.35
SHTN1-202ENST00000355371 DEFB112Q30KQ8 113 aa12.87□□□□□ -0.35
SHTN1-202ENST00000355371 GAGE7O76087 117 aa12.86□□□□□ -0.35
SHTN1-202ENST00000355371 GAGE12FP0CL80 117 aa12.86□□□□□ -0.35
SHTN1-202ENST00000355371 GAGE12GP0CL81 117 aa12.86□□□□□ -0.35
SHTN1-202ENST00000355371 GAGE12IP0CL82 117 aa12.86□□□□□ -0.35
SHTN1-202ENST00000355371 C17orf77Q96MU5 243 aa12.86□□□□□ -0.35
SHTN1-202ENST00000355371 CFHR3Q02985 330 aa12.86□□□□□ -0.35
SHTN1-202ENST00000355371 DYNAPQ8N1N2 210 aa12.86□□□□□ -0.35
SHTN1-202ENST00000355371 F8VRH5 84 aa12.86□□□□□ -0.35
SHTN1-202ENST00000355371 I3L2K1 104 aa12.86□□□□□ -0.35
SHTN1-202ENST00000355371 K7EMI3 77 aa12.86□□□□□ -0.35
SHTN1-202ENST00000355371 KLF5Q13887 457 aaPredicted RBP12.86□□□□□ -0.35
SHTN1-202ENST00000355371 AGPAT4-IT1Q9H0P7 198 aa12.86□□□□□ -0.35
SHTN1-202ENST00000355371 KLF12Q9Y4X4 402 aa12.86□□□□□ -0.35
SHTN1-202ENST00000355371 TRBV20-1A0A075B6N2 111 aa12.85□□□□□ -0.35
SHTN1-202ENST00000355371 CACNA1BQ00975 2339 aa12.85□□□□□ -0.35
SHTN1-202ENST00000355371 C9JAW5 83 aa12.84□□□□□ -0.35
SHTN1-202ENST00000355371 F8WEM9 126 aa12.84□□□□□ -0.35
SHTN1-202ENST00000355371 IGLL1P15814 213 aa12.84□□□□□ -0.35
SHTN1-202ENST00000355371 ZNF493Q6ZR52 646 aa12.84□□□□□ -0.35
SHTN1-202ENST00000355371 MRPL35Q9NZE8 188 aaKnown RBP12.84□□□□□ -0.35
SHTN1-202ENST00000355371 IGHV4-59P01825 116 aa12.84□□□□□ -0.35
SHTN1-202ENST00000355371 IGHV7-81A0A0B4J1V7 117 aa12.84□□□□□ -0.35
SHTN1-202ENST00000355371 TAL2Q16559 108 aa12.84□□□□□ -0.35
SHTN1-202ENST00000355371 ADAMTSL5Q6ZMM2 481 aa12.84□□□□□ -0.35
SHTN1-202ENST00000355371 IGLV11-55A0A075B6I3 123 aa12.84□□□□□ -0.35
SHTN1-202ENST00000355371 SNHG12Q9BXW3 62 aa12.84□□□□□ -0.35
SHTN1-202ENST00000355371 GP9P14770 177 aa12.83□□□□□ -0.36
SHTN1-202ENST00000355371 C9orf118A6NHY6 69 aa12.83□□□□□ -0.36
SHTN1-202ENST00000355371 EGR2P11161 476 aaPredicted RBP12.83□□□□□ -0.36
SHTN1-202ENST00000355371 DOCK9Q9BZ29 2069 aa12.83□□□□□ -0.36
SHTN1-202ENST00000355371 K7EIM0 57 aa12.83□□□□□ -0.36
SHTN1-202ENST00000355371 ZNF561-AS1K7EIQ3 104 aa12.83□□□□□ -0.36
SHTN1-202ENST00000355371 FOXE3Q13461 319 aa12.83□□□□□ -0.36
SHTN1-202ENST00000355371 TSSC4Q9Y5U2 329 aaPredicted RBP12.83□□□□□ -0.36
SHTN1-202ENST00000355371 HOXD3P31249 432 aaPredicted RBP12.83□□□□□ -0.36
SHTN1-202ENST00000355371 IGFBPL1Q8WX77 278 aa12.83□□□□□ -0.36
SHTN1-202ENST00000355371 ZNF625Q96I27 306 aaPredicted RBP12.83□□□□□ -0.36
SHTN1-202ENST00000355371 HLA-DMBP28068 263 aa12.82□□□□□ -0.36
SHTN1-202ENST00000355371 NDUFA12Q9UI09 145 aa12.82□□□□□ -0.36
SHTN1-202ENST00000355371 KLF2Q9Y5W3 355 aaPredicted RBP12.82□□□□□ -0.36
SHTN1-202ENST00000355371 IGHV4-61A0A0C4DH41 118 aa12.82□□□□□ -0.36
SHTN1-202ENST00000355371 INS-IGF2F8WCM5 200 aa12.82□□□□□ -0.36
SHTN1-202ENST00000355371 SIVA1O15304 175 aa12.82□□□□□ -0.36
SHTN1-202ENST00000355371 HERVK_113P63121 156 aa12.81□□□□□ -0.36
SHTN1-202ENST00000355371 RHOHQ15669 191 aa12.81□□□□□ -0.36
SHTN1-202ENST00000355371 CFHR4Q92496 578 aa12.81□□□□□ -0.36
SHTN1-202ENST00000355371 IGHV3-38A0A0C4DH36 116 aa12.81□□□□□ -0.36
SHTN1-202ENST00000355371 ABCA4P78363 2273 aa12.81□□□□□ -0.36
SHTN1-202ENST00000355371 A0A1W2PNU3 283 aaPredicted RBP12.8□□□□□ -0.36
SHTN1-202ENST00000355371 SEM1Q6ZVN7 128 aa12.8□□□□□ -0.36
SHTN1-202ENST00000355371 VWC2LB2RUY7 222 aa12.8□□□□□ -0.36
SHTN1-202ENST00000355371 GAGE6Q13070 117 aa12.8□□□□□ -0.36
SHTN1-202ENST00000355371 OCIAD2Q56VL3 154 aa12.8□□□□□ -0.36
SHTN1-202ENST00000355371 DEFB113Q30KQ7 82 aa12.8□□□□□ -0.36
SHTN1-202ENST00000355371 BOD1L2Q8IYS8 172 aa12.8□□□□□ -0.36
SHTN1-202ENST00000355371 IGKV1-17P01599 117 aa12.8□□□□□ -0.36
SHTN1-202ENST00000355371 HIST1H4AP62805 103 aaKnown RBP12.8□□□□□ -0.36
SHTN1-202ENST00000355371 CACNA1HO95180 2353 aa12.8□□□□□ -0.36
SHTN1-202ENST00000355371 ASPHD1Q5U4P2 390 aa12.79□□□□□ -0.36
SHTN1-202ENST00000355371 DOCK7Q96N67 2140 aa12.79□□□□□ -0.36
SHTN1-202ENST00000355371 ADORA2A-AS1P86434 159 aa12.79□□□□□ -0.36
SHTN1-202ENST00000355371 DAZAP2Q15038 168 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms