RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 MRPL53Q96EL3 112 aaKnown RBP8.54□□□□□ -1.04
CDRT1-202ENST00000354433 ZNF331Q9NQX6 463 aaPredicted RBP8.54□□□□□ -1.04
CDRT1-202ENST00000354433 ZNF492Q9P255 531 aa8.54□□□□□ -1.04
CDRT1-202ENST00000354433 SMPXQ9UHP9 88 aa8.54□□□□□ -1.04
CDRT1-202ENST00000354433 RPH3ALQ9UNE2 315 aa8.54□□□□□ -1.04
CDRT1-202ENST00000354433 ZFP30Q9Y2G7 519 aa8.54□□□□□ -1.04
CDRT1-202ENST00000354433 CSMD3Q7Z407 3707 aa8.53□□□□□ -1.04
CDRT1-202ENST00000354433 LCE6AA0A183 80 aa8.53□□□□□ -1.04
CDRT1-202ENST00000354433 CHEK1O14757 476 aa8.53□□□□□ -1.04
CDRT1-202ENST00000354433 RPL35AP18077 110 aaKnown RBP8.53□□□□□ -1.04
CDRT1-202ENST00000354433 RPS10P46783 165 aaKnown RBP8.53□□□□□ -1.04
CDRT1-202ENST00000354433 PSG3Q16557 428 aa8.53□□□□□ -1.04
CDRT1-202ENST00000354433 DEFB135Q30KP9 77 aa8.53□□□□□ -1.04
CDRT1-202ENST00000354433 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.53□□□□□ -1.04
CDRT1-202ENST00000354433 LOC105371267A0A1B0GV96 52 aa8.52□□□□□ -1.04
CDRT1-202ENST00000354433 RBAKDNA6NC62 111 aa8.52□□□□□ -1.04
CDRT1-202ENST00000354433 APOHP02749 345 aaPredicted RBP8.52□□□□□ -1.04
CDRT1-202ENST00000354433 FAM3BP58499 235 aaPredicted RBP8.52□□□□□ -1.04
CDRT1-202ENST00000354433 RPL11P62913 178 aaKnown RBP8.52□□□□□ -1.04
CDRT1-202ENST00000354433 RPL19P84098 196 aaKnown RBP8.52□□□□□ -1.04
CDRT1-202ENST00000354433 GBGT1Q8N5D6 347 aa8.52□□□□□ -1.04
CDRT1-202ENST00000354433 OVOL2Q9BRP0 275 aa8.52□□□□□ -1.04
CDRT1-202ENST00000354433 IGHV3-66A0A0C4DH42 116 aa8.52□□□□□ -1.05
CDRT1-202ENST00000354433 A0A1W2PPQ1 181 aa8.52□□□□□ -1.05
CDRT1-202ENST00000354433 PAFAH1B2P68402 229 aa8.52□□□□□ -1.05
CDRT1-202ENST00000354433 TCF24Q7RTU0 167 aa8.52□□□□□ -1.05
CDRT1-202ENST00000354433 COX8CQ7Z4L0 72 aa8.52□□□□□ -1.05
CDRT1-202ENST00000354433 WFDC3Q8IUB2 231 aa8.52□□□□□ -1.05
CDRT1-202ENST00000354433 APRG1Q8IVJ8 170 aa8.52□□□□□ -1.05
CDRT1-202ENST00000354433 PSG8Q9UQ74 426 aa8.52□□□□□ -1.05
CDRT1-202ENST00000354433 SACSQ9NZJ4 4579 aa8.51□□□□□ -1.05
CDRT1-202ENST00000354433 SMIM27A0A1W2PRY6 76 aa8.51□□□□□ -1.05
CDRT1-202ENST00000354433 M0R3E3 92 aa8.51□□□□□ -1.05
CDRT1-202ENST00000354433 SPRY2O43597 315 aa8.51□□□□□ -1.05
CDRT1-202ENST00000354433 GATCO43716 136 aaKnown RBP8.51□□□□□ -1.05
CDRT1-202ENST00000354433 CT83Q5H943 113 aa8.51□□□□□ -1.05
CDRT1-202ENST00000354433 SAMD13Q5VXD3 122 aa8.51□□□□□ -1.05
CDRT1-202ENST00000354433 Q6ZWC4 215 aa8.51□□□□□ -1.05
CDRT1-202ENST00000354433 PRNTQ86SH4 94 aa8.51□□□□□ -1.05
CDRT1-202ENST00000354433 NHLRC2Q8NBF2 726 aa8.51□□□□□ -1.05
CDRT1-202ENST00000354433 NUDT10Q8NFP7 164 aa8.51□□□□□ -1.05
CDRT1-202ENST00000354433 NUDT11Q96G61 164 aa8.51□□□□□ -1.05
CDRT1-202ENST00000354433 RNASE7Q9H1E1 156 aaKnown RBP8.51□□□□□ -1.05
CDRT1-202ENST00000354433 TENM2Q9NT68 2774 aa8.5□□□□□ -1.05
CDRT1-202ENST00000354433 C19orf71A6NCJ1 209 aa8.5□□□□□ -1.05
CDRT1-202ENST00000354433 ZNF705GA8MUZ8 300 aaPredicted RBP8.5□□□□□ -1.05
CDRT1-202ENST00000354433 UBE2CO00762 179 aa8.5□□□□□ -1.05
CDRT1-202ENST00000354433 ZNF124Q15973 351 aa8.5□□□□□ -1.05
CDRT1-202ENST00000354433 SAPCD1Q5SSQ6 148 aa8.5□□□□□ -1.05
CDRT1-202ENST00000354433 OR4B1Q8NGF8 309 aa8.5□□□□□ -1.05
CDRT1-202ENST00000354433 TRAV8-1A0A0A6YYK1 113 aa8.49□□□□□ -1.05
CDRT1-202ENST00000354433 KIR2DL5BA0A0G2JN68 375 aa8.49□□□□□ -1.05
CDRT1-202ENST00000354433 KIR2DL5BA0A0G2JPC4 375 aa8.49□□□□□ -1.05
CDRT1-202ENST00000354433 A0A0J9YWU9 116 aa8.49□□□□□ -1.05
CDRT1-202ENST00000354433 CMC4P56277 68 aaPredicted RBP8.49□□□□□ -1.05
CDRT1-202ENST00000354433 COX19Q49B96 90 aa8.49□□□□□ -1.05
CDRT1-202ENST00000354433 KIR2DL5AQ8N109 375 aa8.49□□□□□ -1.05
CDRT1-202ENST00000354433 KIR2DL5BQ8NHK3 375 aa8.49□□□□□ -1.05
CDRT1-202ENST00000354433 SGK494Q96LW2 274 aa8.49□□□□□ -1.05
CDRT1-202ENST00000354433 MAP6D1Q9H9H5 199 aa8.49□□□□□ -1.05
CDRT1-202ENST00000354433 TP53TG1Q9Y2A0 90 aa8.49□□□□□ -1.05
CDRT1-202ENST00000354433 LYSTQ99698 3801 aa8.49□□□□□ -1.05
CDRT1-202ENST00000354433 TRAV8-2A0A0B4J237 113 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 FAM231BA6NCW3 169 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 NPIPB6E9PJ23 425 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 DAZAP1Q96EP5 407 aaKnown RBP8.48□□□□□ -1.05
CDRT1-202ENST00000354433 GFRA4Q9GZZ7 299 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 MS4A6AQ9H2W1 248 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 RYR2Q92736 4967 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 SOCS3O14543 225 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 PHOX2AO14813 284 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 P01737 135 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 TRGC2P03986 189 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 PRR27Q6MZM9 219 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 RASL11AQ6T310 242 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 ZFP82Q8N141 532 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 TSKUQ8WUA8 353 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 C16orf92Q96LL3 132 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 RPP21Q9H633 154 aaKnown RBP8.48□□□□□ -1.05
CDRT1-202ENST00000354433 NRN1Q9NPD7 142 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 PPP1R14DQ9NXH3 145 aa8.48□□□□□ -1.05
CDRT1-202ENST00000354433 IGKV2-40A0A087WW87 121 aaPredicted RBP8.47□□□□□ -1.05
CDRT1-202ENST00000354433 A8MWL6 223 aa8.47□□□□□ -1.05
CDRT1-202ENST00000354433 IGKV2D-40P01614 121 aaPredicted RBP8.47□□□□□ -1.05
CDRT1-202ENST00000354433 S100A6P06703 90 aa8.47□□□□□ -1.05
CDRT1-202ENST00000354433 CT45A10P0DMU9 189 aa8.47□□□□□ -1.05
CDRT1-202ENST00000354433 DEFB131AP59861 70 aa8.47□□□□□ -1.05
CDRT1-202ENST00000354433 ACTL10Q5JWF8 245 aa8.47□□□□□ -1.05
CDRT1-202ENST00000354433 RNF183Q96D59 192 aa8.47□□□□□ -1.05
CDRT1-202ENST00000354433 ZC2HC1AQ96GY0 325 aa8.47□□□□□ -1.05
CDRT1-202ENST00000354433 NDFIP1Q9BT67 221 aa8.47□□□□□ -1.05
CDRT1-202ENST00000354433 CSTL1Q9H114 145 aa8.47□□□□□ -1.05
CDRT1-202ENST00000354433 NAT8BQ9UHF3 227 aa8.47□□□□□ -1.05
CDRT1-202ENST00000354433 CA1P00915 261 aaPredicted RBP8.46□□□□□ -1.06
CDRT1-202ENST00000354433 HLA-DMBP28068 263 aa8.46□□□□□ -1.06
CDRT1-202ENST00000354433 WDR73Q6P4I2 378 aa8.46□□□□□ -1.06
CDRT1-202ENST00000354433 C9orf47Q6ZRZ4 202 aa8.46□□□□□ -1.06
CDRT1-202ENST00000354433 SAV1Q9H4B6 383 aaPredicted RBP8.46□□□□□ -1.06
CDRT1-202ENST00000354433 C5orf52A6NGY3 159 aa8.45□□□□□ -1.06
CDRT1-202ENST00000354433 ZNF705FA8MVS1 300 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms