RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 WI2-2373I1.2A0A1W2PRP0 233 aa10.76□□□□□ -0.69
TRIM4-201ENST00000349062 IGHV4-59P01825 116 aa10.76□□□□□ -0.69
TRIM4-201ENST00000349062 C12orf54Q6X4T0 127 aa10.76□□□□□ -0.69
TRIM4-201ENST00000349062 FAM110DQ8TAY7 271 aaPredicted RBP10.76□□□□□ -0.69
TRIM4-201ENST00000349062 EEF1AKMT3Q96AZ1 226 aa10.76□□□□□ -0.69
TRIM4-201ENST00000349062 URB1-AS1Q96HZ7 61 aa10.76□□□□□ -0.69
TRIM4-201ENST00000349062 IGLV2-11P01706 119 aa10.76□□□□□ -0.69
TRIM4-201ENST00000349062 PSG3Q16557 428 aa10.76□□□□□ -0.69
TRIM4-201ENST00000349062 C7orf71A4D174 169 aa10.76□□□□□ -0.69
TRIM4-201ENST00000349062 K7EP13 123 aa10.76□□□□□ -0.69
TRIM4-201ENST00000349062 SMAD7O15105 426 aaKnown RBP10.76□□□□□ -0.69
TRIM4-201ENST00000349062 PAX8Q06710 450 aa10.76□□□□□ -0.69
TRIM4-201ENST00000349062 OR5AL1P0C617 328 aa10.75□□□□□ -0.69
TRIM4-201ENST00000349062 ARL3P36405 182 aa10.75□□□□□ -0.69
TRIM4-201ENST00000349062 UNQ9165/PRO28630Q6UXU0 137 aa10.75□□□□□ -0.69
TRIM4-201ENST00000349062 Q6ZQT7 251 aa10.75□□□□□ -0.69
TRIM4-201ENST00000349062 ZNF502Q8TBZ5 544 aa10.75□□□□□ -0.69
TRIM4-201ENST00000349062 SRSF8Q9BRL6 282 aaKnown RBP10.75□□□□□ -0.69
TRIM4-201ENST00000349062 SMAD5-AS1Q9Y6J3 95 aa10.75□□□□□ -0.69
TRIM4-201ENST00000349062 TMEM213A2RRL7 107 aa10.75□□□□□ -0.69
TRIM4-201ENST00000349062 CRIP1P50238 77 aa10.75□□□□□ -0.69
TRIM4-201ENST00000349062 K7ERU9 68 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 METTL26Q96S19 204 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 MLST8Q9BVC4 326 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 TMEM189A5PLL7 270 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 H3BUT2 72 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 EBI3Q14213 229 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 KHDC1LQ5JSQ8 128 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 FA2HQ7L5A8 372 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 PIFOQ8TCI5 191 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 MBD6Q96DN6 1003 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 ST20Q9HBF5 79 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 TMEM14CQ9P0S9 112 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 KLF12Q9Y4X4 402 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 C2CD3Q4AC94 2353 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.74□□□□□ -0.69
TRIM4-201ENST00000349062 EDN2P20800 178 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 RBPMS2Q6ZRY4 209 aaKnown RBP10.74□□□□□ -0.69
TRIM4-201ENST00000349062 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
TRIM4-201ENST00000349062 SMKR1H3BMG3 65 aa10.73□□□□□ -0.69
TRIM4-201ENST00000349062 IGKV3-20P01619 116 aa10.73□□□□□ -0.69
TRIM4-201ENST00000349062 DEFB112Q30KQ8 113 aa10.73□□□□□ -0.69
TRIM4-201ENST00000349062 S100A7AQ86SG5 101 aa10.73□□□□□ -0.69
TRIM4-201ENST00000349062 SH2D1AO60880 128 aa10.73□□□□□ -0.69
TRIM4-201ENST00000349062 BEX4Q9NWD9 120 aaPredicted RBP10.73□□□□□ -0.69
TRIM4-201ENST00000349062 FAM231BA6NCW3 169 aa10.73□□□□□ -0.69
TRIM4-201ENST00000349062 B4DSR2 109 aa10.73□□□□□ -0.69
TRIM4-201ENST00000349062 ZNF80P51504 273 aaPredicted RBP10.73□□□□□ -0.69
TRIM4-201ENST00000349062 LYZL1Q6UWQ5 148 aa10.73□□□□□ -0.69
TRIM4-201ENST00000349062 PRSS57Q6UWY2 283 aa10.73□□□□□ -0.69
TRIM4-201ENST00000349062 ZNF843Q8N446 348 aa10.73□□□□□ -0.69
TRIM4-201ENST00000349062 DEFB104AQ8WTQ1 72 aa10.73□□□□□ -0.69
TRIM4-201ENST00000349062 F6UB75 175 aa10.72□□□□□ -0.69
TRIM4-201ENST00000349062 NMUP48645 174 aa10.72□□□□□ -0.69
TRIM4-201ENST00000349062 NCR2O95944 276 aa10.72□□□□□ -0.69
TRIM4-201ENST00000349062 RPL24P83731 157 aaKnown RBP10.72□□□□□ -0.69
TRIM4-201ENST00000349062 TWIST1Q15672 202 aa10.72□□□□□ -0.69
TRIM4-201ENST00000349062 FAM231DQ6ZW35 169 aa10.72□□□□□ -0.69
TRIM4-201ENST00000349062 C11orf44Q8N8P7 122 aa10.72□□□□□ -0.69
TRIM4-201ENST00000349062 AP5S1Q9NUS5 200 aa10.72□□□□□ -0.69
TRIM4-201ENST00000349062 FN1P02751 2386 aaKnown RBP10.72□□□□□ -0.69
TRIM4-201ENST00000349062 AGRNO00468 2067 aa10.72□□□□□ -0.69
TRIM4-201ENST00000349062 DEFB125Q8N687 156 aa10.71□□□□□ -0.69
TRIM4-201ENST00000349062 A0A1B0GUT8 65 aa10.71□□□□□ -0.69
TRIM4-201ENST00000349062 MRPS12O15235 138 aaKnown RBP10.71□□□□□ -0.69
TRIM4-201ENST00000349062 MSRB1Q9NZV6 116 aa10.71□□□□□ -0.69
TRIM4-201ENST00000349062 OR4X2Q8NGF9 303 aa10.71□□□□□ -0.7
TRIM4-201ENST00000349062 PEF1Q9UBV8 284 aaKnown RBP10.71□□□□□ -0.7
TRIM4-201ENST00000349062 HSPB8Q9UJY1 196 aa10.71□□□□□ -0.7
TRIM4-201ENST00000349062 C19orf71A6NCJ1 209 aa10.7□□□□□ -0.7
TRIM4-201ENST00000349062 BUB3O43684 328 aa10.7□□□□□ -0.7
TRIM4-201ENST00000349062 KLF5Q13887 457 aaPredicted RBP10.7□□□□□ -0.7
TRIM4-201ENST00000349062 HIVEP2P31629 2446 aa10.7□□□□□ -0.7
TRIM4-201ENST00000349062 TENM4Q6N022 2769 aa10.7□□□□□ -0.7
TRIM4-201ENST00000349062 FAM106AQ4KMX7 169 aa10.7□□□□□ -0.7
TRIM4-201ENST00000349062 FAM162BQ5T6X4 162 aa10.7□□□□□ -0.7
TRIM4-201ENST00000349062 AMN1Q8IY45 258 aa10.7□□□□□ -0.7
TRIM4-201ENST00000349062 IGF1P05019 195 aa10.69□□□□□ -0.7
TRIM4-201ENST00000349062 WIPF2Q8TF74 440 aaPredicted RBP10.69□□□□□ -0.7
TRIM4-201ENST00000349062 PRR25Q96S07 402 aa10.69□□□□□ -0.7
TRIM4-201ENST00000349062 SRSF1Q07955 248 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRIM4-201ENST00000349062 TMEM97Q5BJF2 176 aa10.69□□□□□ -0.7
TRIM4-201ENST00000349062 C18orf15Q96N68 181 aa10.69□□□□□ -0.7
TRIM4-201ENST00000349062 NDFIP1Q9BT67 221 aa10.69□□□□□ -0.7
TRIM4-201ENST00000349062 NBPF19A0A087WUL8 3843 aa10.69□□□□□ -0.7
TRIM4-201ENST00000349062 RASL11AQ6T310 242 aa10.69□□□□□ -0.7
TRIM4-201ENST00000349062 ZFAND3Q9H8U3 227 aa10.69□□□□□ -0.7
TRIM4-201ENST00000349062 UBR5O95071 2799 aaPredicted RBP10.69□□□□□ -0.7
TRIM4-201ENST00000349062 HIST1H1AQ02539 215 aaPredicted RBP10.68□□□□□ -0.7
TRIM4-201ENST00000349062 NACAE9PAV3 2078 aa10.68□□□□□ -0.7
TRIM4-201ENST00000349062 C8orf86Q6ZUL3 223 aa10.68□□□□□ -0.7
TRIM4-201ENST00000349062 PRSS22Q9GZN4 317 aa10.68□□□□□ -0.7
TRIM4-201ENST00000349062 UFC1Q9Y3C8 167 aa10.68□□□□□ -0.7
TRIM4-201ENST00000349062 CLPSL1A2RUU4 121 aa10.68□□□□□ -0.7
TRIM4-201ENST00000349062 TMEM8BA6NDV4 472 aa10.68□□□□□ -0.7
TRIM4-201ENST00000349062 CD5LO43866 347 aa10.68□□□□□ -0.7
TRIM4-201ENST00000349062 IFI27P40305 119 aaPredicted RBP10.68□□□□□ -0.7
TRIM4-201ENST00000349062 SCRT2Q9NQ03 307 aa10.68□□□□□ -0.7
TRIM4-201ENST00000349062 K7EMI3 77 aa10.67□□□□□ -0.7
TRIM4-201ENST00000349062 TMEM78Q5T7P6 136 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms