RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ATP6V0CP27449 155 aa10.08□□□□□ -0.8
HMGN3-202ENST00000344726 CSN1S1P47710 185 aa10.08□□□□□ -0.8
HMGN3-202ENST00000344726 ZNF266Q14584 549 aa10.08□□□□□ -0.8
HMGN3-202ENST00000344726 LGALS9BQ3B8N2 356 aa10.08□□□□□ -0.8
HMGN3-202ENST00000344726 ANXA2RQ3ZCQ2 193 aa10.08□□□□□ -0.8
HMGN3-202ENST00000344726 PQLC2Q6ZP29 291 aa10.08□□□□□ -0.8
HMGN3-202ENST00000344726 HYLS1Q96M11 299 aa10.08□□□□□ -0.8
HMGN3-202ENST00000344726 SH3BGRL3Q9H299 93 aa10.08□□□□□ -0.8
HMGN3-202ENST00000344726 TRBV7-9A0A0J9YWB2 115 aa10.07□□□□□ -0.8
HMGN3-202ENST00000344726 A0A1W2PPV4 95 aa10.07□□□□□ -0.8
HMGN3-202ENST00000344726 PGPA6NDG6 321 aa10.07□□□□□ -0.8
HMGN3-202ENST00000344726 NUDT3O95989 172 aa10.07□□□□□ -0.8
HMGN3-202ENST00000344726 RGS21Q2M5E4 152 aa10.07□□□□□ -0.8
HMGN3-202ENST00000344726 LINC00336Q6ZUF6 198 aa10.07□□□□□ -0.8
HMGN3-202ENST00000344726 ZNF680Q8NEM1 530 aa10.07□□□□□ -0.8
HMGN3-202ENST00000344726 ASB13Q8WXK3 278 aa10.07□□□□□ -0.8
HMGN3-202ENST00000344726 PSMG3Q9BT73 122 aaPredicted RBP10.07□□□□□ -0.8
HMGN3-202ENST00000344726 TMPRSS5Q9H3S3 457 aa10.07□□□□□ -0.8
HMGN3-202ENST00000344726 OTORQ9NRC9 128 aa10.07□□□□□ -0.8
HMGN3-202ENST00000344726 KLF12Q9Y4X4 402 aa10.07□□□□□ -0.8
HMGN3-202ENST00000344726 IGHV1OR15-1A0A075B7D0 117 aa10.06□□□□□ -0.8
HMGN3-202ENST00000344726 STAG3L2P0CL84 134 aa10.06□□□□□ -0.8
HMGN3-202ENST00000344726 STAG3L3P0CL85 134 aa10.06□□□□□ -0.8
HMGN3-202ENST00000344726 ARL14EPLP0DKL9 152 aa10.06□□□□□ -0.8
HMGN3-202ENST00000344726 CDC34P49427 236 aaPredicted RBP10.06□□□□□ -0.8
HMGN3-202ENST00000344726 OR5I1Q13606 314 aa10.06□□□□□ -0.8
HMGN3-202ENST00000344726 RXFP4Q8TDU9 374 aa10.06□□□□□ -0.8
HMGN3-202ENST00000344726 RPH3ALQ9UNE2 315 aa10.06□□□□□ -0.8
HMGN3-202ENST00000344726 TNFSF18Q9UNG2 199 aa10.06□□□□□ -0.8
HMGN3-202ENST00000344726 RYR1P21817 5038 aa10.05□□□□□ -0.8
HMGN3-202ENST00000344726 TRAV26-1A0A087WT03 109 aa10.05□□□□□ -0.8
HMGN3-202ENST00000344726 FXYD6-FXYD2A0A087WZ82 144 aa10.05□□□□□ -0.8
HMGN3-202ENST00000344726 A0A0J9YY99 117 aa10.05□□□□□ -0.8
HMGN3-202ENST00000344726 RGS13O14921 159 aa10.05□□□□□ -0.8
HMGN3-202ENST00000344726 TCL1AP56279 114 aa10.05□□□□□ -0.8
HMGN3-202ENST00000344726 RPL7L1Q6DKI1 246 aaKnown RBP10.05□□□□□ -0.8
HMGN3-202ENST00000344726 SSX7Q7RTT5 188 aa10.05□□□□□ -0.8
HMGN3-202ENST00000344726 OR2T35Q8NGX2 323 aa10.05□□□□□ -0.8
HMGN3-202ENST00000344726 RAB24Q969Q5 203 aa10.05□□□□□ -0.8
HMGN3-202ENST00000344726 TRGV1A0A0A0MS02 117 aa10.04□□□□□ -0.8
HMGN3-202ENST00000344726 TRAV8-1A0A0A6YYK1 113 aa10.04□□□□□ -0.8
HMGN3-202ENST00000344726 PRSS29PA6NIE9 313 aa10.04□□□□□ -0.8
HMGN3-202ENST00000344726 SPINK4O60575 86 aa10.04□□□□□ -0.8
HMGN3-202ENST00000344726 GNG5P63218 68 aa10.04□□□□□ -0.8
HMGN3-202ENST00000344726 MUC21Q5SSG8 566 aa10.04□□□□□ -0.8
HMGN3-202ENST00000344726 IBA57Q5T440 356 aaKnown RBP10.04□□□□□ -0.8
HMGN3-202ENST00000344726 Q6AWC8 147 aa10.04□□□□□ -0.8
HMGN3-202ENST00000344726 GOLT1AQ6ZVE7 132 aa10.04□□□□□ -0.8
HMGN3-202ENST00000344726 INO80EQ8NBZ0 244 aaPredicted RBP10.04□□□□□ -0.8
HMGN3-202ENST00000344726 SUN5Q8TC36 379 aa10.04□□□□□ -0.8
HMGN3-202ENST00000344726 TVP23CQ96ET8 276 aa10.04□□□□□ -0.8
HMGN3-202ENST00000344726 LINC00588Q9Y4M8 146 aa10.04□□□□□ -0.8
HMGN3-202ENST00000344726 LENEPQ9Y5L5 61 aa10.04□□□□□ -0.8
HMGN3-202ENST00000344726 SERF2P84101 59 aa10.03□□□□□ -0.8
HMGN3-202ENST00000344726 ZNRF2Q8NHG8 242 aa10.03□□□□□ -0.8
HMGN3-202ENST00000344726 CMTM2Q8TAZ6 248 aa10.03□□□□□ -0.8
HMGN3-202ENST00000344726 TMED6Q8WW62 240 aa10.03□□□□□ -0.8
HMGN3-202ENST00000344726 GNPNAT1Q96EK6 184 aaPredicted RBP10.03□□□□□ -0.8
HMGN3-202ENST00000344726 C18orf15Q96N68 181 aa10.03□□□□□ -0.8
HMGN3-202ENST00000344726 ATG101Q9BSB4 218 aa10.03□□□□□ -0.8
HMGN3-202ENST00000344726 KRTAP17-1Q9BYP8 105 aa10.03□□□□□ -0.8
HMGN3-202ENST00000344726 TRGV2A0A075B6R0 118 aa10.02□□□□□ -0.81
HMGN3-202ENST00000344726 GCHFRP30047 84 aa10.02□□□□□ -0.81
HMGN3-202ENST00000344726 FAM3BP58499 235 aaPredicted RBP10.02□□□□□ -0.81
HMGN3-202ENST00000344726 FAM74A1Q5RGS3 127 aa10.02□□□□□ -0.81
HMGN3-202ENST00000344726 ARL6IP6Q8N6S5 226 aa10.02□□□□□ -0.81
HMGN3-202ENST00000344726 VSIG2Q96IQ7 327 aa10.02□□□□□ -0.81
HMGN3-202ENST00000344726 ARPC5LQ9BPX5 153 aa10.02□□□□□ -0.81
HMGN3-202ENST00000344726 MRPL16Q9NX20 251 aaKnown RBP10.02□□□□□ -0.81
HMGN3-202ENST00000344726 MDFICQ9P1T7 246 aa10.02□□□□□ -0.81
HMGN3-202ENST00000344726 SMLR1H3BR10 107 aa10.01□□□□□ -0.81
HMGN3-202ENST00000344726 MBP02144 154 aa10.01□□□□□ -0.81
HMGN3-202ENST00000344726 ZNF726P1Q15940 193 aa10.01□□□□□ -0.81
HMGN3-202ENST00000344726 ST6GAL2Q96JF0 529 aa10.01□□□□□ -0.81
HMGN3-202ENST00000344726 SGK494Q96LW2 274 aa10.01□□□□□ -0.81
HMGN3-202ENST00000344726 F6UZH7 168 aa10□□□□□ -0.81
HMGN3-202ENST00000344726 H3BNG1 76 aa10□□□□□ -0.81
HMGN3-202ENST00000344726 CCL18P55774 89 aa10□□□□□ -0.81
HMGN3-202ENST00000344726 ZNF415Q09FC8 603 aa10□□□□□ -0.81
HMGN3-202ENST00000344726 ACTR3CQ9C0K3 210 aaPredicted RBP10□□□□□ -0.81
HMGN3-202ENST00000344726 CYTL1Q9NRR1 136 aa10□□□□□ -0.81
HMGN3-202ENST00000344726 ABCA13Q86UQ4 5058 aa10□□□□□ -0.81
HMGN3-202ENST00000344726 BORCS7-ASMTA0A0B4J1R7 106 aa9.99□□□□□ -0.81
HMGN3-202ENST00000344726 GGTLC3B5MD39 225 aa9.99□□□□□ -0.81
HMGN3-202ENST00000344726 ARPC5O15511 151 aa9.99□□□□□ -0.81
HMGN3-202ENST00000344726 IGHV3-53P01767 116 aa9.99□□□□□ -0.81
HMGN3-202ENST00000344726 TMEM183BQ1AE95 376 aa9.99□□□□□ -0.81
HMGN3-202ENST00000344726 TMEM183AQ8IXX5 376 aa9.99□□□□□ -0.81
HMGN3-202ENST00000344726 LRP1BQ9NZR2 4599 aa9.99□□□□□ -0.81
HMGN3-202ENST00000344726 A0A096LPF7 62 aa9.98□□□□□ -0.81
HMGN3-202ENST00000344726 NBDYA0A0U1RRE5 68 aa9.98□□□□□ -0.81
HMGN3-202ENST00000344726 CXorf1O96002 111 aa9.98□□□□□ -0.81
HMGN3-202ENST00000344726 IGLV2-11P01706 119 aa9.98□□□□□ -0.81
HMGN3-202ENST00000344726 TCRAP04437 139 aa9.98□□□□□ -0.81
HMGN3-202ENST00000344726 SUMO1P63165 101 aaKnown RBP9.98□□□□□ -0.81
HMGN3-202ENST00000344726 ESRGQ1W209 222 aa9.98□□□□□ -0.81
HMGN3-202ENST00000344726 TDRG1Q3Y452 100 aa9.98□□□□□ -0.81
HMGN3-202ENST00000344726 C1orf134Q5TEV5 83 aa9.98□□□□□ -0.81
HMGN3-202ENST00000344726 FAM159AQ6UWV7 190 aa9.98□□□□□ -0.81
HMGN3-202ENST00000344726 C5orf17Q8NAS9 161 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms