RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 FAM104BQ5XKR9 115 aa6.4□□□□□ -1.38
UBE4B-202ENST00000343090 DKK2Q9UBU2 259 aa6.4□□□□□ -1.38
UBE4B-202ENST00000343090 ERG28Q9UKR5 140 aa6.4□□□□□ -1.38
UBE4B-202ENST00000343090 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.4□□□□□ -1.381e-7■■■■■ 29.1
UBE4B-202ENST00000343090 MRPL51Q4U2R6 128 aaKnown RBP6.4□□□□□ -1.39
UBE4B-202ENST00000343090 CT83Q5H943 113 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 MED13Q9UHV7 2174 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 ZNF106Q9H2Y7 1883 aaKnown RBP6.4□□□□□ -1.39
UBE4B-202ENST00000343090 C2orf16Q68DN1 1984 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 FAM223BA6NKX1 122 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 KNCNA6PVL3 124 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 C22orf46C9J442 243 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 WISP2O76076 250 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 PLNP26678 52 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 C12orf74Q32Q52 190 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 LINC01559Q495D7 138 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 FAM120AOSQ5T036 256 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 FAM223AQ8IWN6 122 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 PHLDA1Q8WV24 401 aaPredicted RBP6.4□□□□□ -1.39
UBE4B-202ENST00000343090 CHCHD5Q9BSY4 110 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 SIGLEC8Q9NYZ4 499 aa6.4□□□□□ -1.39
UBE4B-202ENST00000343090 TRGV1A0A0A0MS02 117 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 C2orf70A6NJV1 201 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 K7EMI3 77 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 HLA-DMBP28068 263 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 LINC01545Q5VT33 79 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 FAM110DQ8TAY7 271 aaPredicted RBP6.39□□□□□ -1.39
UBE4B-202ENST00000343090 LINC01549A6NIU2 74 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 H3BRN7 92 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 CMC4P56277 68 aaPredicted RBP6.39□□□□□ -1.39
UBE4B-202ENST00000343090 C8orf86Q6ZUL3 223 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 ARFGEF3Q5TH69 2177 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 PRSS46E5RG02 174 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 VCYO14598 125 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 RPL35AP18077 110 aaKnown RBP6.39□□□□□ -1.39
UBE4B-202ENST00000343090 UBE2E1P51965 193 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 LINC00311Q8N616 119 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 USMG5Q96IX5 58 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 RITA1Q96K30 269 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 PRR25Q96S07 402 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 DAZ1Q9NQZ3 744 aaKnown RBP6.39□□□□□ -1.39
UBE4B-202ENST00000343090 ZGRF1Q86YA3 2104 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 IGLL5B9A064 214 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 NDUFS7O75251 213 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 MORN5Q5VZ52 161 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 C16orf54Q6UWD8 224 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 NEGR1Q7Z3B1 354 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 KLK9Q9UKQ9 250 aa6.39□□□□□ -1.39
UBE4B-202ENST00000343090 ADARB2-AS1A8MUL3 147 aa6.38□□□□□ -1.39
UBE4B-202ENST00000343090 CDK2AP2O75956 126 aa6.38□□□□□ -1.39
UBE4B-202ENST00000343090 Q6ZSR3 168 aa6.38□□□□□ -1.39
UBE4B-202ENST00000343090 TTC28Q96AY4 2481 aa6.38□□□□□ -1.39
UBE4B-202ENST00000343090 PCNX2A6NKB5 2137 aa6.38□□□□□ -1.39
UBE4B-202ENST00000343090 A0A1W2PNU3 283 aaPredicted RBP6.38□□□□□ -1.39
UBE4B-202ENST00000343090 FXYD2P54710 66 aa6.38□□□□□ -1.39
UBE4B-202ENST00000343090 FOXI2Q6ZQN5 318 aa6.38□□□□□ -1.39
UBE4B-202ENST00000343090 THAP8Q8NA92 274 aa6.38□□□□□ -1.39
UBE4B-202ENST00000343090 SPXQ9BT56 116 aa6.38□□□□□ -1.39
UBE4B-202ENST00000343090 SPINK13Q1W4C9 94 aa6.38□□□□□ -1.39
UBE4B-202ENST00000343090 C9orf153Q5TBE3 101 aa6.38□□□□□ -1.39
UBE4B-202ENST00000343090 KLHL30-AS1Q8NEE0 82 aa6.38□□□□□ -1.39
UBE4B-202ENST00000343090 FREM1Q5H8C1 2179 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 NPYP01303 97 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 C2orf82Q6UX34 121 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 MSRB2Q9Y3D2 182 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 M0R2P5 195 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 SPANXA1Q9NS26 97 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 TRAV12-2A0A075B6T6 113 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 BDP1A6H8Y1 2624 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 RNF223E7ERA6 249 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 SPRY2O43597 315 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 DEFB131AP59861 70 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 ATXN8Q156A1 80 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 POU2AF1Q16633 256 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 PRSS33Q8NF86 280 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 TMEM190Q8WZ59 177 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 DKK4Q9UBT3 224 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 PRSS29PA6NIE9 313 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 IGLV2-14P01704 120 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 LINC00158P58513 81 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 DSCR9P59020 149 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 RNF183Q96D59 192 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 C1orf159Q96HA4 380 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 TP53TG1Q9Y2A0 90 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 ARHGAP21Q5T5U3 1957 aa6.37□□□□□ -1.39
UBE4B-202ENST00000343090 SHISA9B4DS77 424 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 PIP4P1Q86T03 277 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 ZNF295-AS1Q8N0V1 137 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 ZNF491Q8N8L2 437 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 SVIPQ8NHG7 77 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 IGF2BP2-AS1Q96M15 143 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 TMEM14CQ9P0S9 112 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 IGHV1-69DA0A0B4J2H0 117 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 IGHV1-69P01742 117 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 TRAV13-1A0A0B4J241 112 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 IGHV3-16A0A0C4DH30 117 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 LHBP01229 141 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 MSMBP08118 114 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 TCTEX1D4Q5JR98 221 aa6.36□□□□□ -1.39
UBE4B-202ENST00000343090 SPAG8Q99932 426 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms