RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ZNF561-AS1K7EIQ3 104 aa9.94□□□□□ -0.82
LIN54-201ENST00000340417 NCR2O95944 276 aa9.94□□□□□ -0.82
LIN54-201ENST00000340417 U3KQE9 123 aa9.94□□□□□ -0.82
LIN54-201ENST00000340417 TMEM238LA0A1B0GVL6 79 aa9.94□□□□□ -0.82
LIN54-201ENST00000340417 A6NJY4 79 aa9.94□□□□□ -0.82
LIN54-201ENST00000340417 M0R2P5 195 aa9.94□□□□□ -0.82
LIN54-201ENST00000340417 CRYGCP07315 174 aa9.94□□□□□ -0.82
LIN54-201ENST00000340417 LINC01548A6NM66 108 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 TRBV12-3P01733 135 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 TMEM61Q8N0U2 210 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 RHOHQ15669 191 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 C16orf54Q6UWD8 224 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 ICOSQ9Y6W8 199 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 TEX22C9J3V5 150 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 COX6CP09669 75 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 EML5Q05BV3 1969 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 TRAV13-1A0A0B4J241 112 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 WIPF3A6NGB9 483 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 HLA-DMBP28068 263 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 Q9HAA7 133 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 SIGLEC8Q9NYZ4 499 aa9.93□□□□□ -0.82
LIN54-201ENST00000340417 CEP295Q9C0D2 2601 aa9.92□□□□□ -0.82
LIN54-201ENST00000340417 TEX43Q6ZNM6 134 aa9.92□□□□□ -0.82
LIN54-201ENST00000340417 ZNF493Q6ZR52 646 aa9.92□□□□□ -0.82
LIN54-201ENST00000340417 LINC00479Q96M42 142 aa9.92□□□□□ -0.82
LIN54-201ENST00000340417 DERL1Q9BUN8 251 aa9.92□□□□□ -0.82
LIN54-201ENST00000340417 VAMP3Q15836 100 aa9.92□□□□□ -0.82
LIN54-201ENST00000340417 C11orf45Q8TAV5 145 aa9.92□□□□□ -0.82
LIN54-201ENST00000340417 MRPL53Q96EL3 112 aaKnown RBP9.92□□□□□ -0.82
LIN54-201ENST00000340417 HIST1H4GQ99525 98 aa9.92□□□□□ -0.82
LIN54-201ENST00000340417 ANKRD11Q6UB99 2663 aaPredicted RBP9.92□□□□□ -0.82
LIN54-201ENST00000340417 SHANK1Q9Y566 2161 aa9.92□□□□□ -0.82
LIN54-201ENST00000340417 IGF1P05019 195 aa9.92□□□□□ -0.82
LIN54-201ENST00000340417 ZNF702PQ9H963 129 aa9.92□□□□□ -0.82
LIN54-201ENST00000340417 IGKV2D-24A0A075B6R9 120 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 UBE2CO00762 179 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 GAGE6Q13070 117 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 HIST2H2BDQ6DRA6 164 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 RNF152Q8N8N0 203 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 CHD3Q12873 2000 aaKnown RBP9.91□□□□□ -0.82
LIN54-201ENST00000340417 IGKV1OR2-108A0A075B7D4 117 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 M0R143 59 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 MRPL23Q16540 153 aaKnown RBP9.91□□□□□ -0.82
LIN54-201ENST00000340417 C6orf226Q5I0X4 101 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 TRAV1-1A0A0B4J248 108 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 A0A1W2PPR1 153 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 LINC01549A6NIU2 74 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 LAGE3Q14657 143 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 TMEM243Q9BU79 118 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 ESM1Q9NQ30 184 aa9.91□□□□□ -0.82
LIN54-201ENST00000340417 LINC00158P58513 81 aa9.9□□□□□ -0.82
LIN54-201ENST00000340417 ATP5L2Q7Z4Y8 100 aa9.9□□□□□ -0.82
LIN54-201ENST00000340417 ANGP03950 147 aaKnown RBP9.9□□□□□ -0.82
LIN54-201ENST00000340417 IGHV3-38A0A0C4DH36 116 aa9.9□□□□□ -0.82
LIN54-201ENST00000340417 NDUFA7O95182 113 aa9.9□□□□□ -0.82
LIN54-201ENST00000340417 JOSD1Q15040 202 aaPredicted RBP9.9□□□□□ -0.82
LIN54-201ENST00000340417 DNLZQ5SXM8 178 aa9.9□□□□□ -0.82
LIN54-201ENST00000340417 CYTL1Q9NRR1 136 aa9.9□□□□□ -0.82
LIN54-201ENST00000340417 GGTLC3B5MD39 225 aa9.9□□□□□ -0.83
LIN54-201ENST00000340417 SEC11AP67812 179 aa9.9□□□□□ -0.83
LIN54-201ENST00000340417 C17orf77Q96MU5 243 aa9.9□□□□□ -0.83
LIN54-201ENST00000340417 D6R8Y8 96 aa9.89□□□□□ -0.83
LIN54-201ENST00000340417 ARL6IP6Q8N6S5 226 aa9.89□□□□□ -0.83
LIN54-201ENST00000340417 COL4A2P08572 1712 aa9.89□□□□□ -0.83
LIN54-201ENST00000340417 RBMY1BA6NDE4 496 aaKnown RBP9.89□□□□□ -0.83
LIN54-201ENST00000340417 RBMY1EA6NEQ0 496 aaKnown RBP9.89□□□□□ -0.83
LIN54-201ENST00000340417 RBMY1DP0C7P1 496 aaKnown RBP9.89□□□□□ -0.83
LIN54-201ENST00000340417 RBMY1A1P0DJD3 496 aaKnown RBP9.89□□□□□ -0.83
LIN54-201ENST00000340417 RBMY1CP0DJD4 496 aa9.89□□□□□ -0.83
LIN54-201ENST00000340417 RNF183Q96D59 192 aa9.89□□□□□ -0.83
LIN54-201ENST00000340417 PAM16Q9Y3D7 125 aa9.89□□□□□ -0.83
LIN54-201ENST00000340417 AVPP01185 164 aa9.89□□□□□ -0.83
LIN54-201ENST00000340417 PRB2P02812 416 aaPredicted RBP9.88□□□□□ -0.83
LIN54-201ENST00000340417 UNQ9165/PRO28630Q6UXU0 137 aa9.88□□□□□ -0.83
LIN54-201ENST00000340417 PCNX3Q9H6A9 2034 aa9.88□□□□□ -0.83
LIN54-201ENST00000340417 LINC00574Q9H8X3 128 aa9.88□□□□□ -0.83
LIN54-201ENST00000340417 HBDP02042 147 aa9.88□□□□□ -0.83
LIN54-201ENST00000340417 TRBV7-9A0A0J9YWB2 115 aa9.88□□□□□ -0.83
LIN54-201ENST00000340417 BUB3O43684 328 aa9.88□□□□□ -0.83
LIN54-201ENST00000340417 IGKV1-17P01599 117 aa9.88□□□□□ -0.83
LIN54-201ENST00000340417 NAV3Q8IVL0 2385 aa9.87□□□□□ -0.83
LIN54-201ENST00000340417 IGHV3-64A0A075B6Q5 118 aa9.87□□□□□ -0.83
LIN54-201ENST00000340417 VWC2LB2RUY7 222 aa9.87□□□□□ -0.83
LIN54-201ENST00000340417 LYL1P12980 280 aa9.87□□□□□ -0.83
LIN54-201ENST00000340417 PMCHL1Q16048 86 aa9.87□□□□□ -0.83
LIN54-201ENST00000340417 PRR14LQ5THK1 2151 aa9.87□□□□□ -0.83
LIN54-201ENST00000340417 RASL11AQ6T310 242 aa9.87□□□□□ -0.83
LIN54-201ENST00000340417 C10orf99Q6UWK7 81 aa9.87□□□□□ -0.83
LIN54-201ENST00000340417 CHTOPQ9Y3Y2 248 aaKnown RBP9.87□□□□□ -0.83
LIN54-201ENST00000340417 GYPEP15421 78 aa9.87□□□□□ -0.83
LIN54-201ENST00000340417 SH2D6Q7Z4S9 175 aa9.87□□□□□ -0.83
LIN54-201ENST00000340417 MAP6D1Q9H9H5 199 aa9.87□□□□□ -0.83
LIN54-201ENST00000340417 A0A0U1RRA0 63 aa9.86□□□□□ -0.83
LIN54-201ENST00000340417 FAM110AQ9BQ89 295 aa9.86□□□□□ -0.83
LIN54-201ENST00000340417 AGPAT4-IT1Q9H0P7 198 aa9.86□□□□□ -0.83
LIN54-201ENST00000340417 A6NDN8 102 aa9.86□□□□□ -0.83
LIN54-201ENST00000340417 RASL10AQ92737 203 aa9.86□□□□□ -0.83
LIN54-201ENST00000340417 FXYD5Q96DB9 178 aa9.86□□□□□ -0.83
LIN54-201ENST00000340417 S100A7L2Q5SY68 101 aa9.86□□□□□ -0.83
LIN54-201ENST00000340417 SMIM12Q96EX1 92 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms