RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CCDC28AQ8IWP9 274 aa10.87□□□□□ -0.67
UBE3B-201ENST00000340074 MBD3L1Q8WWY6 194 aa10.87□□□□□ -0.67
UBE3B-201ENST00000340074 TRAV10A0A0B4J240 114 aa10.86□□□□□ -0.67
UBE3B-201ENST00000340074 A0A1B0GV50 99 aa10.86□□□□□ -0.67
UBE3B-201ENST00000340074 K7EQM0 130 aa10.86□□□□□ -0.67
UBE3B-201ENST00000340074 EIF5AL1Q6IS14 154 aaKnown RBP10.86□□□□□ -0.67
UBE3B-201ENST00000340074 C2CD4CQ8TF44 421 aa10.86□□□□□ -0.67
UBE3B-201ENST00000340074 TVP23CQ96ET8 276 aa10.86□□□□□ -0.67
UBE3B-201ENST00000340074 DEFB131BA0A096LNP1 70 aa10.85□□□□□ -0.67
UBE3B-201ENST00000340074 LYRM9A8MSI8 78 aa10.85□□□□□ -0.67
UBE3B-201ENST00000340074 IFNA7P01567 189 aa10.85□□□□□ -0.67
UBE3B-201ENST00000340074 H2AFB1P0C5Y9 115 aa10.85□□□□□ -0.67
UBE3B-201ENST00000340074 CYB561D1Q8N8Q1 229 aa10.85□□□□□ -0.67
UBE3B-201ENST00000340074 ATG101Q9BSB4 218 aa10.85□□□□□ -0.67
UBE3B-201ENST00000340074 NKX6-2Q9C056 277 aaPredicted RBP10.85□□□□□ -0.67
UBE3B-201ENST00000340074 TIMM8BQ9Y5J9 83 aaPredicted RBP10.85□□□□□ -0.67
UBE3B-201ENST00000340074 RGS13O14921 159 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 IGLV2-11P01706 119 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 DAD1P61803 113 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 EIF4E3Q8N5X7 224 aaKnown RBP10.84□□□□□ -0.67
UBE3B-201ENST00000340074 LINC00467Q9BRT7 94 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 TREM1Q9NP99 234 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 NOP10Q9NPE3 64 aaKnown RBP10.84□□□□□ -0.67
UBE3B-201ENST00000340074 CBY3A6NI87 242 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 IGLL5B9A064 214 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 F6UZH7 168 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 DEFB130BP0DP73 79 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 DEFB130AP0DP74 79 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 SULT1A2P50226 295 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 RAB5CP51148 216 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 NKX2-5P52952 324 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-201ENST00000340074 FLI1Q01543 452 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-201ENST00000340074 CST9LP1Q5W188 147 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 Q6AWC8 147 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 TMEM75Q8N9X5 138 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 LINC00479Q96M42 142 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 PSG8Q9UQ74 426 aa10.84□□□□□ -0.67
UBE3B-201ENST00000340074 SACSQ9NZJ4 4579 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 IGHV1OR15-1A0A075B7D0 117 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 TRAV34A0A0B4J273 112 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 LCE6AA0A183 80 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 SNURFLB1AK76 121 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 PEX7O00628 323 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 PAGE4O60829 102 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 ANXA2RQ3ZCQ2 193 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 MUC21Q5SSG8 566 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 PRNTQ86SH4 94 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 C8orf49Q96NF6 230 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 NDFIP1Q9BT67 221 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 TP53TG3Q9ULZ0 132 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 ARL2-SNX15V9GYD0 113 aa10.83□□□□□ -0.68
UBE3B-201ENST00000340074 ATP5G3P48201 142 aa10.82□□□□□ -0.68
UBE3B-201ENST00000340074 C11orf72Q8NBR9 251 aa10.82□□□□□ -0.68
UBE3B-201ENST00000340074 ZNF680Q8NEM1 530 aa10.82□□□□□ -0.68
UBE3B-201ENST00000340074 HIST1H2BAQ96A08 127 aa10.82□□□□□ -0.68
UBE3B-201ENST00000340074 FBLL1A6NHQ2 334 aaKnown RBP10.81□□□□□ -0.68
UBE3B-201ENST00000340074 HTN3P15516 51 aa10.81□□□□□ -0.68
UBE3B-201ENST00000340074 GSN-AS1Q9NRJ2 163 aa10.81□□□□□ -0.68
UBE3B-201ENST00000340074 IGHV4-4A0A075B6R2 117 aa10.8□□□□□ -0.68
UBE3B-201ENST00000340074 PPT1P50897 306 aa10.8□□□□□ -0.68
UBE3B-201ENST00000340074 CCL20P78556 96 aa10.8□□□□□ -0.68
UBE3B-201ENST00000340074 DAZ2Q13117 558 aaKnown RBP10.8□□□□□ -0.68
UBE3B-201ENST00000340074 FAM159AQ6UWV7 190 aa10.8□□□□□ -0.68
UBE3B-201ENST00000340074 NAGKQ9UJ70 344 aa10.8□□□□□ -0.68
UBE3B-201ENST00000340074 TRAV1-1A0A0B4J248 108 aa10.79□□□□□ -0.68
UBE3B-201ENST00000340074 TRAV21A0A0B4J279 112 aa10.79□□□□□ -0.68
UBE3B-201ENST00000340074 GCGP01275 180 aa10.79□□□□□ -0.68
UBE3B-201ENST00000340074 ZNF80P51504 273 aaPredicted RBP10.79□□□□□ -0.68
UBE3B-201ENST00000340074 TCL1AP56279 114 aa10.79□□□□□ -0.68
UBE3B-201ENST00000340074 IBA57Q5T440 356 aaKnown RBP10.79□□□□□ -0.68
UBE3B-201ENST00000340074 TCEAL7Q9BRU2 100 aa10.79□□□□□ -0.68
UBE3B-201ENST00000340074 APLNQ9ULZ1 77 aa10.79□□□□□ -0.68
UBE3B-201ENST00000340074 BOLA1Q9Y3E2 137 aa10.79□□□□□ -0.68
UBE3B-201ENST00000340074 KLF12Q9Y4X4 402 aa10.79□□□□□ -0.68
UBE3B-201ENST00000340074 RYR3Q15413 4870 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 GAGE12BA1L429 117 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 TEX46H3BTG2 121 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 GAGE7O76087 117 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 GAGE12FP0CL80 117 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 GAGE12GP0CL81 117 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 GAGE12IP0CL82 117 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 TCTAP57738 103 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 SMUG1Q53HV7 270 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 SAPCD1Q5SSQ6 148 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 Q86TA4 180 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 LINC00612Q8N6U2 182 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 LINC00476Q8WZB0 136 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 GNG13Q9P2W3 67 aa10.78□□□□□ -0.68
UBE3B-201ENST00000340074 UBE2G1P62253 170 aa10.77□□□□□ -0.68
UBE3B-201ENST00000340074 ZNF415Q09FC8 603 aa10.77□□□□□ -0.68
UBE3B-201ENST00000340074 TMEM183BQ1AE95 376 aa10.77□□□□□ -0.68
UBE3B-201ENST00000340074 TDRG1Q3Y452 100 aa10.77□□□□□ -0.68
UBE3B-201ENST00000340074 ALKAL2Q6UX46 152 aa10.77□□□□□ -0.68
UBE3B-201ENST00000340074 Q6ZTI0 123 aa10.77□□□□□ -0.68
UBE3B-201ENST00000340074 TMEM183AQ8IXX5 376 aa10.77□□□□□ -0.68
UBE3B-201ENST00000340074 FMC1Q96HJ9 113 aa10.77□□□□□ -0.68
UBE3B-201ENST00000340074 MANBALQ9NQG1 85 aa10.77□□□□□ -0.68
UBE3B-201ENST00000340074 MDFICQ9P1T7 246 aa10.77□□□□□ -0.68
UBE3B-201ENST00000340074 ALMS1Q8TCU4 4167 aa10.77□□□□□ -0.69
UBE3B-201ENST00000340074 SCO2A0A1W2PP80 73 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms