RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 RNF223E7ERA6 249 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 KLF5Q13887 457 aaPredicted RBP10.87□□□□□ -0.67
SPAST-201ENST00000315285 ADAMTSL5Q6ZMM2 481 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 KLK9Q9UKQ9 250 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 KMT2EQ8IZD2 1858 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 MYMXA0A1B0GTQ4 84 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 MORN5Q5VZ52 161 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 C1orf122Q6ZSJ8 110 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 SMIM2Q9BVW6 85 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 A0A087WX48 190 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 HLA-DMBP28068 263 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 MAJINQ3KP22 176 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 MRPL35Q9NZE8 188 aaKnown RBP10.87□□□□□ -0.67
SPAST-201ENST00000315285 ANKHD1Q8IWZ3 2542 aaKnown RBP10.87□□□□□ -0.67
SPAST-201ENST00000315285 SLC25A20O43772 301 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 GRNP28799 593 aaKnown RBP10.87□□□□□ -0.67
SPAST-201ENST00000315285 PMVKQ15126 192 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 PRSS33Q8NF86 280 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 TMEM141Q96I45 108 aa10.87□□□□□ -0.67
SPAST-201ENST00000315285 A0A1W2PNU3 283 aaPredicted RBP10.86□□□□□ -0.67
SPAST-201ENST00000315285 C1QTNF4Q9BXJ3 329 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 CST9LQ9H4G1 147 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 C11orf1Q9H5F2 150 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 COL4A4P53420 1690 aaPredicted RBP10.86□□□□□ -0.67
SPAST-201ENST00000315285 C9orf118A6NHY6 69 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 CRPP02741 224 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 PATE2Q6UY27 113 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 MAPK1IP1LQ8NDC0 245 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 IGHV1OR15-1A0A075B7D0 117 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 GP9P14770 177 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 DPH3Q96FX2 82 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 PCDH15Q96QU1 1955 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 KIR2DL5BA0A0G2JN68 375 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 KIR2DL5BA0A0G2JPC4 375 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 RHODO00212 210 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 C2orf82Q6UX34 121 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 KIR2DL5AQ8N109 375 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 GTSF1LQ9H1H1 148 aa10.86□□□□□ -0.67
SPAST-201ENST00000315285 PAX4O43316 350 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 NUPR1O60356 82 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 CKS1BP61024 79 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 OCIAD2Q56VL3 154 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 DYNAPQ8N1N2 210 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 OR11H6Q8NGC7 330 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 PTPRQQ9UMZ3 2332 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 NDUFS7O75251 213 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 EGR2P11161 476 aaPredicted RBP10.85□□□□□ -0.67
SPAST-201ENST00000315285 PRIMA1Q86XR5 153 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 C11orf68Q9H3H3 251 aaKnown RBP10.85□□□□□ -0.67
SPAST-201ENST00000315285 GHRHP01286 108 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 IGKV1-17P01599 117 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 GAGE2BQ13066 116 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 GAGE2EQ4V326 116 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 ZNF747Q9BV97 191 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 GAGE2DQ9UEU5 116 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 TECTAO75443 2155 aa10.85□□□□□ -0.67
SPAST-201ENST00000315285 ACACBO00763 2458 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 CDKN1BP46527 198 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 BVES-AS1Q5T3Y7 98 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 ALPK3Q96L96 1907 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 TRAV12-2A0A075B6T6 113 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 I3L2K1 104 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 RITA1Q96K30 269 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 AGPAT4-IT1Q9H0P7 198 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 XCL2Q9UBD3 114 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 F8VRH5 84 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 HOXB4P17483 251 aaPredicted RBP10.84□□□□□ -0.67
SPAST-201ENST00000315285 NEGR1Q7Z3B1 354 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 I3L3M4 83 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 K7EIM0 57 aa10.84□□□□□ -0.67
SPAST-201ENST00000315285 NBL1P41271 181 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 FAM167A-AS1Q96KT0 104 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 DENND4AQ7Z401 1863 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 EP400Q96L91 3159 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 SEM1Q6ZVN7 128 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 IGF2BP2-AS1Q96M15 143 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 PCNX3Q9H6A9 2034 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 IGHV7-4-1A0A0J9YVY3 117 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 HLA-DRB4P13762 266 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 GAGE1Q13065 139 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 IGF2-ASQ6U949 168 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 GATD1Q8NB37 220 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 IGFBPL1Q8WX77 278 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 DKK2Q9UBU2 259 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 HLA-DRB4X5D2U9 266 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 C9JAW5 83 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 TCTEX1D4Q5JR98 221 aa10.83□□□□□ -0.68
SPAST-201ENST00000315285 S100A7L2Q5SY68 101 aa10.82□□□□□ -0.68
SPAST-201ENST00000315285 IGKV1OR2-108A0A075B7D4 117 aa10.82□□□□□ -0.68
SPAST-201ENST00000315285 LINC01619G3V211 115 aa10.82□□□□□ -0.68
SPAST-201ENST00000315285 C6orf226Q5I0X4 101 aa10.82□□□□□ -0.68
SPAST-201ENST00000315285 Q5PR19 223 aa10.82□□□□□ -0.68
SPAST-201ENST00000315285 ZFAND6Q6FIF0 208 aa10.82□□□□□ -0.68
SPAST-201ENST00000315285 SP5Q6BEB4 398 aaPredicted RBP10.82□□□□□ -0.68
SPAST-201ENST00000315285 Q6ZPA2 131 aa10.81□□□□□ -0.68
SPAST-201ENST00000315285 C20orf78Q9BR46 151 aa10.81□□□□□ -0.68
SPAST-201ENST00000315285 TMEM131Q92545 1883 aa10.81□□□□□ -0.68
SPAST-201ENST00000315285 ARHGAP21Q5T5U3 1957 aa10.81□□□□□ -0.68
SPAST-201ENST00000315285 LEPROTO15243 131 aa10.81□□□□□ -0.68
SPAST-201ENST00000315285 CRIP3Q6Q6R5 217 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms