RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 IGKV3D-20A0A0C4DH25 116 aa10.67□□□□□ -0.7
MKS1-201ENST00000313863 TM4SF20Q53R12 229 aa10.67□□□□□ -0.7
MKS1-201ENST00000313863 EEF1AKMT3Q96AZ1 226 aa10.67□□□□□ -0.7
MKS1-201ENST00000313863 METTL26Q96S19 204 aa10.67□□□□□ -0.7
MKS1-201ENST00000313863 ZZEF1O43149 2961 aa10.67□□□□□ -0.7
MKS1-201ENST00000313863 CLEC3BP05452 202 aa10.67□□□□□ -0.7
MKS1-201ENST00000313863 C9orf47Q6ZRZ4 202 aa10.67□□□□□ -0.7
MKS1-201ENST00000313863 AGPAT4-IT1Q9H0P7 198 aa10.67□□□□□ -0.7
MKS1-201ENST00000313863 TMEM160Q9NX00 188 aa10.67□□□□□ -0.7
MKS1-201ENST00000313863 TRBV7-1A0A0A6YYK4 115 aa10.66□□□□□ -0.7
MKS1-201ENST00000313863 TRAV12-1A0A0B4J245 112 aa10.66□□□□□ -0.7
MKS1-201ENST00000313863 GAS8-AS1O95177 125 aa10.66□□□□□ -0.7
MKS1-201ENST00000313863 PPIFP30405 207 aaKnown RBP10.66□□□□□ -0.7
MKS1-201ENST00000313863 RIPPLY3P57055 190 aa10.66□□□□□ -0.7
MKS1-201ENST00000313863 SPANXN1Q5VSR9 72 aa10.66□□□□□ -0.7
MKS1-201ENST00000313863 RNF182Q8N6D2 247 aa10.66□□□□□ -0.7
MKS1-201ENST00000313863 NRACQ8N912 160 aa10.66□□□□□ -0.7
MKS1-201ENST00000313863 MSRB2Q9Y3D2 182 aa10.66□□□□□ -0.7
MKS1-201ENST00000313863 LENEPQ9Y5L5 61 aa10.66□□□□□ -0.7
MKS1-201ENST00000313863 DMXL1Q9Y485 3027 aa10.66□□□□□ -0.7
MKS1-201ENST00000313863 LINC01619G3V211 115 aa10.65□□□□□ -0.7
MKS1-201ENST00000313863 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.65□□□□□ -0.7
MKS1-201ENST00000313863 K7EMI3 77 aa10.65□□□□□ -0.7
MKS1-201ENST00000313863 GATA1P15976 413 aaPredicted RBP10.65□□□□□ -0.7
MKS1-201ENST00000313863 ECSCRQ19T08 205 aa10.65□□□□□ -0.7
MKS1-201ENST00000313863 ATP6V0BQ99437 205 aa10.65□□□□□ -0.7
MKS1-201ENST00000313863 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
MKS1-201ENST00000313863 MRPL35Q9NZE8 188 aaKnown RBP10.65□□□□□ -0.7
MKS1-201ENST00000313863 UFC1Q9Y3C8 167 aa10.65□□□□□ -0.7
MKS1-201ENST00000313863 TRAV40A0A0B4J280 105 aa10.65□□□□□ -0.7
MKS1-201ENST00000313863 IGHV3-35A0A0C4DH35 117 aa10.65□□□□□ -0.7
MKS1-201ENST00000313863 J3QR89 54 aa10.65□□□□□ -0.7
MKS1-201ENST00000313863 ZNF207O43670 478 aaKnown RBP10.65□□□□□ -0.7
MKS1-201ENST00000313863 SLC25A16P16260 332 aa10.65□□□□□ -0.7
MKS1-201ENST00000313863 PHLDA1Q8WV24 401 aaPredicted RBP10.65□□□□□ -0.7
MKS1-201ENST00000313863 AKAP13Q12802 2813 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 IGHV3OR16-8A0A075B7F1 116 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 IGHV7-4-1A0A0J9YVY3 117 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 F8W1H4 67 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 H7C1H1 209 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 LY6HO94772 140 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 TRGV3P03979 118 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 ORMDL2Q53FV1 153 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 C11orf71Q6IPW1 123 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 E9PLD3 99 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 RPL24P83731 157 aaKnown RBP10.64□□□□□ -0.71
MKS1-201ENST00000313863 CLEC2AQ6UVW9 174 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 C8orf86Q6ZUL3 223 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 C11orf21Q9P2W6 132 aa10.64□□□□□ -0.71
MKS1-201ENST00000313863 RIF1Q5UIP0 2472 aaKnown RBP10.63□□□□□ -0.71
MKS1-201ENST00000313863 CLPSL1A2RUU4 121 aa10.63□□□□□ -0.71
MKS1-201ENST00000313863 ATP6V0E1O15342 81 aa10.63□□□□□ -0.71
MKS1-201ENST00000313863 UBE2E1P51965 193 aa10.63□□□□□ -0.71
MKS1-201ENST00000313863 CLEC19AQ6UXS0 136 aa10.63□□□□□ -0.71
MKS1-201ENST00000313863 SMIM2Q9BVW6 85 aa10.63□□□□□ -0.71
MKS1-201ENST00000313863 SIRPDQ9H106 197 aa10.63□□□□□ -0.71
MKS1-201ENST00000313863 ADGRG4Q8IZF6 3080 aa10.63□□□□□ -0.71
MKS1-201ENST00000313863 BSNQ9UPA5 3926 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 TRAV8-2A0A0B4J237 113 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 IGLL5B9A064 214 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 F8VRH5 84 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 K7ENP7 123 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 CCL21O00585 134 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 GRNP28799 593 aaKnown RBP10.62□□□□□ -0.71
MKS1-201ENST00000313863 TCF15Q12870 199 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 C9orf139Q6ZV77 190 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 SVIPQ8NHG7 77 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 TTTY13Q9BZ97 58 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 GVINP1Q7Z2Y8 2422 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 KALRNO60229 2985 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 FOXI2Q6ZQN5 318 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 ZNF479Q96JC4 524 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 CCDC140Q96MF4 163 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 HIST1H4GQ99525 98 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 C20orf78Q9BR46 151 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 U3KQE9 123 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 WNK2Q9Y3S1 2297 aa10.62□□□□□ -0.71
MKS1-201ENST00000313863 K7ERJ3 54 aa10.61□□□□□ -0.71
MKS1-201ENST00000313863 ABCA4P78363 2273 aa10.61□□□□□ -0.71
MKS1-201ENST00000313863 IGHV3-66A0A0C4DH42 116 aa10.61□□□□□ -0.71
MKS1-201ENST00000313863 OR11H12B2RN74 326 aa10.61□□□□□ -0.71
MKS1-201ENST00000313863 PPP1R17O96001 155 aa10.61□□□□□ -0.71
MKS1-201ENST00000313863 ATP5G2Q06055 141 aa10.61□□□□□ -0.71
MKS1-201ENST00000313863 C12orf74Q32Q52 190 aa10.61□□□□□ -0.71
MKS1-201ENST00000313863 OR11H1Q8NG94 326 aa10.61□□□□□ -0.71
MKS1-201ENST00000313863 OR11H2Q8NH07 326 aa10.61□□□□□ -0.71
MKS1-201ENST00000313863 C16orf92Q96LL3 132 aa10.61□□□□□ -0.71
MKS1-201ENST00000313863 LINC00477Q96M19 166 aa10.61□□□□□ -0.71
MKS1-201ENST00000313863 SAMD13Q5VXD3 122 aa10.6□□□□□ -0.71
MKS1-201ENST00000313863 SCGB3A1Q96QR1 104 aa10.6□□□□□ -0.71
MKS1-201ENST00000313863 TRAV26-2A0A0B4J265 109 aa10.59□□□□□ -0.71
MKS1-201ENST00000313863 TEX48A0A1B0GUV7 120 aa10.59□□□□□ -0.71
MKS1-201ENST00000313863 H3BVH4 76 aa10.59□□□□□ -0.71
MKS1-201ENST00000313863 TOMM6Q96B49 74 aa10.59□□□□□ -0.71
MKS1-201ENST00000313863 SELENOKQ9Y6D0 94 aa10.59□□□□□ -0.71
MKS1-201ENST00000313863 LAMA5O15230 3695 aa10.59□□□□□ -0.71
MKS1-201ENST00000313863 TACC2O95359 2948 aa10.59□□□□□ -0.71
MKS1-201ENST00000313863 MYMXA0A1B0GTQ4 84 aa10.59□□□□□ -0.71
MKS1-201ENST00000313863 FAM223BA6NKX1 122 aa10.59□□□□□ -0.71
MKS1-201ENST00000313863 M0R381 172 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms