RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 PRB2P02812 416 aaPredicted RBP3.79□□□□□ -1.8
CKS1B-201ENST00000308987 TCRAP04437 139 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 LIPFP07098 398 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 CRYGBP07316 175 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 PYYP10082 97 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 GP9P14770 177 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 NTF3P20783 257 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 RPL27AP46776 148 aaKnown RBP3.79□□□□□ -1.8
CKS1B-201ENST00000308987 DLX6P56179 175 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 UBE2V1Q13404 147 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 TMEM155Q4W5P6 130 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 LRRC10Q5BKY1 277 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 PSMG4Q5JS54 123 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 GDF5OSQ5U4N7 250 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 EBLN2Q6P2I7 272 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 SPATA12Q7Z6I5 190 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 FAM19A2Q8N3H0 131 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 STPG4Q8N801 248 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 OR4F17Q8NGA8 305 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 C8orf46Q8TAG6 207 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 DAZAP1Q96EP5 407 aaKnown RBP3.79□□□□□ -1.8
CKS1B-201ENST00000308987 TIMD4Q96H15 378 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 TMEM191AQ9H0A3 160 aa3.79□□□□□ -1.8
CKS1B-201ENST00000308987 TENM2Q9NT68 2774 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 TRAV30A0A087WSZ9 112 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 LOC102724200A0A096LPH7 203 aaPredicted RBP3.78□□□□□ -1.8
CKS1B-201ENST00000308987 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.78□□□□□ -1.8
CKS1B-201ENST00000308987 IGHV2-70DA0A0C4DH43 119 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 SERTM2A0A1B0GWG4 89 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 A0A1W2PPI3 338 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 HSBP1L1C9JCN9 74 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 G3V4G9 280 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 SYS1-DBNDD2H3BUS1 97 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 SPINK4O60575 86 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 NDUFA7O95182 113 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 LEPROTL1O95214 131 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 MOSP00540 346 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 PPIAL4GP0DN37 164 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 IGLL1P15814 213 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 SLC35B1P78383 322 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 RHOGP84095 191 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 BATFQ16520 125 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 MRGPRG-AS1Q2M3A8 158 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 LEMD1Q68G75 181 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 RNASEKQ6P5S7 137 aaKnown RBP3.78□□□□□ -1.8
CKS1B-201ENST00000308987 SLC25A34Q6PIV7 304 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 DUX4L9Q6RFH8 374 aaPredicted RBP3.78□□□□□ -1.8
CKS1B-201ENST00000308987 LYPD2Q6UXB3 125 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 ZNF841Q6ZN19 808 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 TMEM75Q8N9X5 138 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 LINC01006Q8NI28 216 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 URB1-AS1Q96HZ7 61 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 LINC00479Q96M42 142 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 NPFFR1Q9GZQ6 430 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 HSPB8Q9UJY1 196 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 HIGD1AQ9Y241 93 aa3.78□□□□□ -1.8
CKS1B-201ENST00000308987 F11RQ9Y624 299 aaKnown RBP3.78□□□□□ -1.8
CKS1B-201ENST00000308987 HYDINQ4G0P3 5121 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 TRAV34A0A0B4J273 112 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 CENPVL3A0A0U1RRI6 287 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 A0A1B0GUT8 65 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 CLPSL1A2RUU4 121 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 OR4C46A6NHA9 309 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 E7EUB6 86 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 K7EQM0 130 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 CHEK1O14757 476 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 SLC25A17O43808 307 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 CA1P00915 261 aaPredicted RBP3.77□□□□□ -1.81
CKS1B-201ENST00000308987 IGHV4-59P01825 116 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 APOHP02749 345 aaPredicted RBP3.77□□□□□ -1.81
CKS1B-201ENST00000308987 IGLC1P0CG04 106 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 IGHV1-8P0DP01 117 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 CAMPP49913 170 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 RIGQ13278 110 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 PDE6HQ13956 83 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 Q56UQ5 140 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 SAPCD1Q5SSQ6 148 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 KPRPQ5T749 579 aaPredicted RBP3.77□□□□□ -1.81
CKS1B-201ENST00000308987 LINC01545Q5VT33 79 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 ZNF493Q6ZR52 646 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 Q6ZSV7 163 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 COX8CQ7Z4L0 72 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 Q86TA4 180 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 OR1B1Q8NGR6 318 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 FAM110DQ8TAY7 271 aaPredicted RBP3.77□□□□□ -1.81
CKS1B-201ENST00000308987 H1FXQ92522 213 aaKnown RBP3.77□□□□□ -1.81
CKS1B-201ENST00000308987 MAP1LC3CQ9BXW4 147 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 TMEM133Q9H2Q1 129 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 Q9H3A6 140 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 SIGLEC9Q9Y336 463 aa3.77□□□□□ -1.81
CKS1B-201ENST00000308987 IGHV1-24A0A0C4DH33 117 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 TEX22C9J3V5 150 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 M0QZ24 198 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 CCL25O15444 150 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 IGLV1-47P01700 117 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 IGLV2-11P01706 119 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 CCL3L1P16619 93 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 ORM2P19652 201 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 S100A7P31151 101 aa3.76□□□□□ -1.81
CKS1B-201ENST00000308987 CDKN1BP46527 198 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 1763.1 ms