RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 C9orf118A6NHY6 69 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 COX8AP10176 69 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 PSCAO43653 123 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 TCF15Q12870 199 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 TCTEX1D4Q5JR98 221 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 TRBV25-1A0A075B6N4 114 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 K7EN84 100 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 IGHV3-38A0A0C4DH36 116 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 SSC4DQ8WTU2 575 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 KLF12Q9Y4X4 402 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 VWC2LB2RUY7 222 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 PLA2G2CQ5R387 149 aa11.06□□□□□ -0.64
PRKCB-201ENST00000303531 MRPL35Q9NZE8 188 aaKnown RBP11.06□□□□□ -0.64
PRKCB-201ENST00000303531 K7EM74 188 aa11.05□□□□□ -0.64
PRKCB-201ENST00000303531 FAM120AOSQ5T036 256 aa11.05□□□□□ -0.64
PRKCB-201ENST00000303531 F8WEM9 126 aa11.05□□□□□ -0.64
PRKCB-201ENST00000303531 POU2AF1Q16633 256 aa11.05□□□□□ -0.64
PRKCB-201ENST00000303531 EDA2RQ9HAV5 297 aa11.05□□□□□ -0.64
PRKCB-201ENST00000303531 VOPP1Q96AW1 172 aa11.05□□□□□ -0.64
PRKCB-201ENST00000303531 ZNRF2Q8NHG8 242 aa11.04□□□□□ -0.64
PRKCB-201ENST00000303531 LTAP01374 205 aa11.04□□□□□ -0.64
PRKCB-201ENST00000303531 PFN2P35080 140 aa11.04□□□□□ -0.64
PRKCB-201ENST00000303531 SMIM2Q9BVW6 85 aa11.04□□□□□ -0.64
PRKCB-201ENST00000303531 VWC2Q2TAL6 325 aa11.04□□□□□ -0.64
PRKCB-201ENST00000303531 ZNF491Q8N8L2 437 aa11.04□□□□□ -0.64
PRKCB-201ENST00000303531 C17orf77Q96MU5 243 aa11.04□□□□□ -0.64
PRKCB-201ENST00000303531 Q96MF0 132 aa11.04□□□□□ -0.64
PRKCB-201ENST00000303531 H3BMM0 161 aa11.04□□□□□ -0.64
PRKCB-201ENST00000303531 UBE2WQ96B02 151 aa11.04□□□□□ -0.64
PRKCB-201ENST00000303531 KAAG1Q9UBP8 84 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 HLA-DRB4P13762 266 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 HLA-DRB4X5D2U9 266 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 GAGE7O76087 117 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 GAGE12FP0CL80 117 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 GAGE12GP0CL81 117 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 GAGE12IP0CL82 117 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 F5H768 121 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 LURAP1LQ8IV03 231 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 KIAA1671Q9BY89 1806 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 TRBV20-1A0A075B6N2 111 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 Q8NFD4 153 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 C11orf53Q8IXP5 236 aa11.03□□□□□ -0.64
PRKCB-201ENST00000303531 NPSP0C0P6 89 aa11.02□□□□□ -0.64
PRKCB-201ENST00000303531 LYPD6BQ8NI32 183 aa11.02□□□□□ -0.64
PRKCB-201ENST00000303531 PCNX2A6NKB5 2137 aa11.02□□□□□ -0.64
PRKCB-201ENST00000303531 IGHV7-4-1A0A0J9YVY3 117 aa11.02□□□□□ -0.65
PRKCB-201ENST00000303531 DAD1P61803 113 aa11.02□□□□□ -0.65
PRKCB-201ENST00000303531 OR11H6Q8NGC7 330 aa11.02□□□□□ -0.65
PRKCB-201ENST00000303531 IGLC7A0M8Q6 106 aa11.02□□□□□ -0.65
PRKCB-201ENST00000303531 NDUFA12Q9UI09 145 aa11.02□□□□□ -0.65
PRKCB-201ENST00000303531 F8VRH5 84 aa11.02□□□□□ -0.65
PRKCB-201ENST00000303531 HLA-DMBP28068 263 aa11.02□□□□□ -0.65
PRKCB-201ENST00000303531 BVES-AS1Q5T3Y7 98 aa11.02□□□□□ -0.65
PRKCB-201ENST00000303531 TMEM243Q9BU79 118 aa11.01□□□□□ -0.65
PRKCB-201ENST00000303531 CR1LQ2VPA4 569 aa11.01□□□□□ -0.65
PRKCB-201ENST00000303531 CDK2AP2O75956 126 aa11.01□□□□□ -0.65
PRKCB-201ENST00000303531 C22orf46C9J442 243 aa11.01□□□□□ -0.65
PRKCB-201ENST00000303531 GAGE6Q13070 117 aa11.01□□□□□ -0.65
PRKCB-201ENST00000303531 CTSZQ9UBR2 303 aa11.01□□□□□ -0.65
PRKCB-201ENST00000303531 DYSFO75923 2080 aa11.01□□□□□ -0.65
PRKCB-201ENST00000303531 NOTCH4Q99466 2003 aa11.01□□□□□ -0.65
PRKCB-201ENST00000303531 ZNF561-AS1K7EIQ3 104 aa11□□□□□ -0.65
PRKCB-201ENST00000303531 FGF6P10767 208 aa11□□□□□ -0.65
PRKCB-201ENST00000303531 PYGO2Q9BRQ0 406 aa11□□□□□ -0.65
PRKCB-201ENST00000303531 MAJINQ3KP22 176 aa11□□□□□ -0.65
PRKCB-201ENST00000303531 MORN5Q5VZ52 161 aa11□□□□□ -0.65
PRKCB-201ENST00000303531 CEND1Q8N111 149 aa11□□□□□ -0.65
PRKCB-201ENST00000303531 FGF23Q9GZV9 251 aaPredicted RBP11□□□□□ -0.65
PRKCB-201ENST00000303531 DKK2Q9UBU2 259 aa11□□□□□ -0.65
PRKCB-201ENST00000303531 NDUFS7O75251 213 aa11□□□□□ -0.65
PRKCB-201ENST00000303531 ETDBQ3ZM63 59 aa11□□□□□ -0.65
PRKCB-201ENST00000303531 K7EP34 96 aa11□□□□□ -0.65
PRKCB-201ENST00000303531 DYNAPQ8N1N2 210 aa11□□□□□ -0.65
PRKCB-201ENST00000303531 TANC1Q9C0D5 1861 aa10.99□□□□□ -0.65
PRKCB-201ENST00000303531 C3orf56Q8N813 242 aa10.99□□□□□ -0.65
PRKCB-201ENST00000303531 C8orf31Q8N9H6 132 aa10.99□□□□□ -0.65
PRKCB-201ENST00000303531 K7ERJ3 54 aa10.99□□□□□ -0.65
PRKCB-201ENST00000303531 SOCS3O14543 225 aa10.99□□□□□ -0.65
PRKCB-201ENST00000303531 HOXB4P17483 251 aaPredicted RBP10.99□□□□□ -0.65
PRKCB-201ENST00000303531 SPRNQ5BIV9 151 aa10.99□□□□□ -0.65
PRKCB-201ENST00000303531 SHISA9B4DS77 424 aa10.99□□□□□ -0.65
PRKCB-201ENST00000303531 C20orf78Q9BR46 151 aa10.99□□□□□ -0.65
PRKCB-201ENST00000303531 EML6Q6ZMW3 1958 aa10.99□□□□□ -0.65
PRKCB-201ENST00000303531 PLCE1Q9P212 2302 aa10.99□□□□□ -0.65
PRKCB-201ENST00000303531 TSSC4Q9Y5U2 329 aaPredicted RBP10.99□□□□□ -0.65
PRKCB-201ENST00000303531 F8W1H4 67 aa10.98□□□□□ -0.65
PRKCB-201ENST00000303531 INAFM2P0DMQ5 153 aa10.98□□□□□ -0.65
PRKCB-201ENST00000303531 PPDPFLQ8WWR9 84 aa10.98□□□□□ -0.65
PRKCB-201ENST00000303531 J3QLI3 93 aa10.98□□□□□ -0.65
PRKCB-201ENST00000303531 K7EP13 123 aa10.98□□□□□ -0.65
PRKCB-201ENST00000303531 EGR2P11161 476 aaPredicted RBP10.98□□□□□ -0.65
PRKCB-201ENST00000303531 A0A1W2PPM0 123 aa10.98□□□□□ -0.65
PRKCB-201ENST00000303531 F6UB75 175 aa10.98□□□□□ -0.65
PRKCB-201ENST00000303531 NXPH4O95158 308 aa10.98□□□□□ -0.65
PRKCB-201ENST00000303531 PRO1854Q9UHT4 67 aa10.98□□□□□ -0.65
PRKCB-201ENST00000303531 RNASE13Q5GAN3 156 aaKnown RBP10.98□□□□□ -0.65
PRKCB-201ENST00000303531 J3QQQ9 107 aa10.97□□□□□ -0.65
PRKCB-201ENST00000303531 FOXE3Q13461 319 aa10.97□□□□□ -0.65
PRKCB-201ENST00000303531 CFHR4Q92496 578 aa10.97□□□□□ -0.65
PRKCB-201ENST00000303531 WIPF2Q8TF74 440 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms