RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 GAGE2BQ13066 116 aa13.96□□□□□ -0.17
CDC42EP3-201ENST00000295324 DEFB136Q30KP8 78 aa13.96□□□□□ -0.17
CDC42EP3-201ENST00000295324 GAGE2EQ4V326 116 aa13.96□□□□□ -0.17
CDC42EP3-201ENST00000295324 GAGE2DQ9UEU5 116 aa13.96□□□□□ -0.17
CDC42EP3-201ENST00000295324 ERG28Q9UKR5 140 aa13.96□□□□□ -0.17
CDC42EP3-201ENST00000295324 M0R2P5 195 aa13.96□□□□□ -0.17
CDC42EP3-201ENST00000295324 LOXL1Q08397 574 aaPredicted RBP13.96□□□□□ -0.17
CDC42EP3-201ENST00000295324 SPXQ9BT56 116 aa13.96□□□□□ -0.17
CDC42EP3-201ENST00000295324 CT83Q5H943 113 aa13.96□□□□□ -0.17
CDC42EP3-201ENST00000295324 ZFAND6Q6FIF0 208 aa13.96□□□□□ -0.18
CDC42EP3-201ENST00000295324 TRBV25-1A0A075B6N4 114 aa13.95□□□□□ -0.18
CDC42EP3-201ENST00000295324 HAPLN4Q86UW8 402 aa13.95□□□□□ -0.18
CDC42EP3-201ENST00000295324 C8orf49Q96NF6 230 aa13.95□□□□□ -0.18
CDC42EP3-201ENST00000295324 IGHV3-16A0A0C4DH30 117 aa13.95□□□□□ -0.18
CDC42EP3-201ENST00000295324 ZFP36P26651 326 aaKnown RBP13.95□□□□□ -0.18
CDC42EP3-201ENST00000295324 SLAQ13239 276 aa13.95□□□□□ -0.18
CDC42EP3-201ENST00000295324 WIPF3A6NGB9 483 aa13.95□□□□□ -0.18
CDC42EP3-201ENST00000295324 ANXA2RQ3ZCQ2 193 aa13.95□□□□□ -0.18
CDC42EP3-201ENST00000295324 CXCL1P09341 107 aa13.94□□□□□ -0.18
CDC42EP3-201ENST00000295324 LY6G5BQ8NDX9 201 aa13.94□□□□□ -0.18
CDC42EP3-201ENST00000295324 CST9LQ9H4G1 147 aa13.94□□□□□ -0.18
CDC42EP3-201ENST00000295324 TMEM238C9JI98 176 aa13.94□□□□□ -0.18
CDC42EP3-201ENST00000295324 HIST3H2BBQ8N257 126 aa13.94□□□□□ -0.18
CDC42EP3-201ENST00000295324 TMEM158Q8WZ71 300 aa13.94□□□□□ -0.18
CDC42EP3-201ENST00000295324 PRSS46E5RG02 174 aa13.93□□□□□ -0.18
CDC42EP3-201ENST00000295324 EREGO14944 169 aa13.93□□□□□ -0.18
CDC42EP3-201ENST00000295324 PAX4O43316 350 aa13.93□□□□□ -0.18
CDC42EP3-201ENST00000295324 PRR31Q5SQ13 230 aa13.93□□□□□ -0.18
CDC42EP3-201ENST00000295324 COL4A4P53420 1690 aaPredicted RBP13.93□□□□□ -0.18
CDC42EP3-201ENST00000295324 SMKR1H3BMG3 65 aa13.92□□□□□ -0.18
CDC42EP3-201ENST00000295324 TNFRSF6BO95407 300 aa13.92□□□□□ -0.18
CDC42EP3-201ENST00000295324 GP9P14770 177 aa13.92□□□□□ -0.18
CDC42EP3-201ENST00000295324 Q8N9W7 124 aa13.92□□□□□ -0.18
CDC42EP3-201ENST00000295324 C5orf56Q8N8D9 126 aa13.92□□□□□ -0.18
CDC42EP3-201ENST00000295324 ZNF843Q8N446 348 aa13.92□□□□□ -0.18
CDC42EP3-201ENST00000295324 IGF2RP11717 2491 aa13.92□□□□□ -0.18
CDC42EP3-201ENST00000295324 DOCK11Q5JSL3 2073 aa13.92□□□□□ -0.18
CDC42EP3-201ENST00000295324 SLURP1P55000 103 aa13.91□□□□□ -0.18
CDC42EP3-201ENST00000295324 RMI2Q96E14 147 aa13.91□□□□□ -0.18
CDC42EP3-201ENST00000295324 CLPSL1A2RUU4 121 aa13.91□□□□□ -0.18
CDC42EP3-201ENST00000295324 HIST1H4AP62805 103 aaKnown RBP13.91□□□□□ -0.18
CDC42EP3-201ENST00000295324 TMEM256Q8N2U0 113 aa13.91□□□□□ -0.18
CDC42EP3-201ENST00000295324 C19orf84I3L1E1 186 aa13.91□□□□□ -0.18
CDC42EP3-201ENST00000295324 IGLV1-47P01700 117 aa13.91□□□□□ -0.18
CDC42EP3-201ENST00000295324 PRR20EP86478 221 aa13.91□□□□□ -0.18
CDC42EP3-201ENST00000295324 PRR20CP86479 221 aa13.91□□□□□ -0.18
CDC42EP3-201ENST00000295324 PRR20DP86480 221 aa13.91□□□□□ -0.18
CDC42EP3-201ENST00000295324 PRR20BP86481 221 aa13.91□□□□□ -0.18
CDC42EP3-201ENST00000295324 PRR20AP86496 221 aa13.91□□□□□ -0.18
CDC42EP3-201ENST00000295324 AJUBAQ96IF1 538 aa13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 NAV2Q8IVL1 2488 aa13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 ZNF561-AS1K7EIQ3 104 aa13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 GUSBP1Q15486 140 aa13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 Q8N7P7 452 aa13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 IGFBPL1Q8WX77 278 aa13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 ZNF114Q8NC26 417 aa13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 ZNRF2Q8NHG8 242 aa13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 MRPL53Q96EL3 112 aaKnown RBP13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 NAA38Q9BRA0 125 aaKnown RBP13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 SIRPDQ9H106 197 aa13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 GATD1Q8NB37 220 aa13.9□□□□□ -0.18
CDC42EP3-201ENST00000295324 TMEM213A2RRL7 107 aa13.89□□□□□ -0.19
CDC42EP3-201ENST00000295324 MSMPQ1L6U9 139 aa13.89□□□□□ -0.19
CDC42EP3-201ENST00000295324 FXYD5Q96DB9 178 aa13.89□□□□□ -0.19
CDC42EP3-201ENST00000295324 I3L3M4 83 aa13.89□□□□□ -0.19
CDC42EP3-201ENST00000295324 MYO18BQ8IUG5 2567 aa13.89□□□□□ -0.19
CDC42EP3-201ENST00000295324 IGLV11-55A0A075B6I3 123 aa13.89□□□□□ -0.19
CDC42EP3-201ENST00000295324 MYCNOSP40205 109 aa13.89□□□□□ -0.19
CDC42EP3-201ENST00000295324 PYGO2Q9BRQ0 406 aa13.89□□□□□ -0.19
CDC42EP3-201ENST00000295324 TMEM89A2RUT3 159 aa13.89□□□□□ -0.19
CDC42EP3-201ENST00000295324 COLCA2A8K830 154 aa13.89□□□□□ -0.19
CDC42EP3-201ENST00000295324 TMEM243Q9BU79 118 aa13.88□□□□□ -0.19
CDC42EP3-201ENST00000295324 CCDC168Q8NDH2 2452 aa13.88□□□□□ -0.19
CDC42EP3-201ENST00000295324 NPC2P61916 151 aa13.88□□□□□ -0.19
CDC42EP3-201ENST00000295324 BCL6BQ8N143 479 aaPredicted RBP13.88□□□□□ -0.19
CDC42EP3-201ENST00000295324 LENEPQ9Y5L5 61 aa13.88□□□□□ -0.19
CDC42EP3-201ENST00000295324 COL4A3Q01955 1670 aa13.88□□□□□ -0.19
CDC42EP3-201ENST00000295324 MYMXA0A1B0GTQ4 84 aa13.88□□□□□ -0.19
CDC42EP3-201ENST00000295324 VWC2Q2TAL6 325 aa13.88□□□□□ -0.19
CDC42EP3-201ENST00000295324 OCIAD2Q56VL3 154 aa13.88□□□□□ -0.19
CDC42EP3-201ENST00000295324 SRSF2Q01130 221 aaKnown RBP13.88□□□□□ -0.19
CDC42EP3-201ENST00000295324 FAM104BQ5XKR9 115 aa13.88□□□□□ -0.19
CDC42EP3-201ENST00000295324 DLEU1O43261 78 aa13.87□□□□□ -0.19
CDC42EP3-201ENST00000295324 FREM1Q5H8C1 2179 aa13.87□□□□□ -0.19
CDC42EP3-201ENST00000295324 FAM231DQ6ZW35 169 aa13.87□□□□□ -0.19
CDC42EP3-201ENST00000295324 LURAP1LQ8IV03 231 aa13.87□□□□□ -0.19
CDC42EP3-201ENST00000295324 PRIMA1Q86XR5 153 aa13.87□□□□□ -0.19
CDC42EP3-201ENST00000295324 PIFOQ8TCI5 191 aa13.87□□□□□ -0.19
CDC42EP3-201ENST00000295324 IGF2BP2-AS1Q96M15 143 aa13.87□□□□□ -0.19
CDC42EP3-201ENST00000295324 TIMM21Q9BVV7 248 aa13.86□□□□□ -0.19
CDC42EP3-201ENST00000295324 SDHAF1A6NFY7 115 aa13.86□□□□□ -0.19
CDC42EP3-201ENST00000295324 ZNF48Q96MX3 618 aaPredicted RBP13.86□□□□□ -0.19
CDC42EP3-201ENST00000295324 K7EIM0 57 aa13.86□□□□□ -0.19
CDC42EP3-201ENST00000295324 I3L2K1 104 aa13.86□□□□□ -0.19
CDC42EP3-201ENST00000295324 IGHG2P01859 326 aa13.86□□□□□ -0.19
CDC42EP3-201ENST00000295324 LMO4P61968 165 aa13.86□□□□□ -0.19
CDC42EP3-201ENST00000295324 PRSS57Q6UWY2 283 aa13.86□□□□□ -0.19
CDC42EP3-201ENST00000295324 ZNF726P1Q15940 193 aa13.85□□□□□ -0.19
CDC42EP3-201ENST00000295324 TEX48A0A1B0GUV7 120 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms