RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 NDUFA12Q9UI09 145 aa10.95□□□□□ -0.66
NOTCH1-201ENST00000277541 EFNA4P52798 201 aa10.95□□□□□ -0.66
NOTCH1-201ENST00000277541 SPACA3Q8IXA5 215 aa10.95□□□□□ -0.66
NOTCH1-201ENST00000277541 DEFB125Q8N687 156 aa10.95□□□□□ -0.66
NOTCH1-201ENST00000277541 TRAV26-2A0A0B4J265 109 aa10.95□□□□□ -0.66
NOTCH1-201ENST00000277541 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.95□□□□□ -0.66
NOTCH1-201ENST00000277541 E9PQ18 207 aa10.95□□□□□ -0.66
NOTCH1-201ENST00000277541 J3QQQ9 107 aa10.95□□□□□ -0.66
NOTCH1-201ENST00000277541 WDR87Q6ZQQ6 2873 aa10.95□□□□□ -0.66
NOTCH1-201ENST00000277541 TRBV25-1A0A075B6N4 114 aa10.95□□□□□ -0.66
NOTCH1-201ENST00000277541 SS18L2Q9UHA2 77 aa10.95□□□□□ -0.66
NOTCH1-201ENST00000277541 DKK1O94907 266 aa10.94□□□□□ -0.66
NOTCH1-201ENST00000277541 LINC00527Q9UJ94 153 aa10.94□□□□□ -0.66
NOTCH1-201ENST00000277541 NDUFS7O75251 213 aa10.94□□□□□ -0.66
NOTCH1-201ENST00000277541 C3orf36Q3SXR2 165 aa10.94□□□□□ -0.66
NOTCH1-201ENST00000277541 POU2AF1Q16633 256 aa10.94□□□□□ -0.66
NOTCH1-201ENST00000277541 PRR25Q96S07 402 aa10.94□□□□□ -0.66
NOTCH1-201ENST00000277541 NAV3Q8IVL0 2385 aa10.94□□□□□ -0.66
NOTCH1-201ENST00000277541 CRLF1O75462 422 aa10.94□□□□□ -0.66
NOTCH1-201ENST00000277541 C15orf53Q8NAA6 179 aa10.94□□□□□ -0.66
NOTCH1-201ENST00000277541 IGHG3P01860 377 aa10.94□□□□□ -0.66
NOTCH1-201ENST00000277541 LMO1P25800 156 aa10.94□□□□□ -0.66
NOTCH1-201ENST00000277541 SHISA9B4DS77 424 aa10.93□□□□□ -0.66
NOTCH1-201ENST00000277541 IGHV3-53P01767 116 aa10.93□□□□□ -0.66
NOTCH1-201ENST00000277541 NPYP01303 97 aa10.93□□□□□ -0.66
NOTCH1-201ENST00000277541 FOXG1P55316 489 aaPredicted RBP10.93□□□□□ -0.66
NOTCH1-201ENST00000277541 DSCAMO60469 2012 aa10.93□□□□□ -0.66
NOTCH1-201ENST00000277541 B5MCH6 92 aa10.93□□□□□ -0.66
NOTCH1-201ENST00000277541 HERVK_113P63121 156 aa10.93□□□□□ -0.66
NOTCH1-201ENST00000277541 NSUN5P1Q3KNT7 163 aa10.93□□□□□ -0.66
NOTCH1-201ENST00000277541 FXYD5Q96DB9 178 aa10.93□□□□□ -0.66
NOTCH1-201ENST00000277541 K7EN84 100 aa10.93□□□□□ -0.66
NOTCH1-201ENST00000277541 C8orf86Q6ZUL3 223 aa10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 UBE2DNLQ8IWF7 75 aa10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 H3BRN7 92 aa10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 COA6Q5JTJ3 125 aaKnown RBP10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 AMTNQ6UX39 209 aa10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 B3GALT5-AS1P59052 145 aa10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 HAMPP81172 84 aa10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 PIP4P2Q8N4L2 257 aa10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 GATA4P43694 442 aa10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 TCTEX1D4Q5JR98 221 aa10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 MLANAQ16655 118 aa10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 PTPRQQ9UMZ3 2332 aa10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 B4DSR2 109 aa10.92□□□□□ -0.66
NOTCH1-201ENST00000277541 CDPF1Q6NVV7 123 aa10.91□□□□□ -0.66
NOTCH1-201ENST00000277541 MSRB2Q9Y3D2 182 aa10.91□□□□□ -0.66
NOTCH1-201ENST00000277541 THSD7BQ9C0I4 1608 aa10.91□□□□□ -0.66
NOTCH1-201ENST00000277541 DKK2Q9UBU2 259 aa10.91□□□□□ -0.66
NOTCH1-201ENST00000277541 LTBRP36941 435 aa10.91□□□□□ -0.66
NOTCH1-201ENST00000277541 H3BUX3 64 aa10.91□□□□□ -0.66
NOTCH1-201ENST00000277541 ZNF134P52741 427 aa10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 THAP8Q8NA92 274 aa10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 CSRP1P21291 193 aaKnown RBP10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 CRYBA4P53673 196 aa10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 RBM3P98179 157 aaKnown RBP10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 RPL35AP18077 110 aaKnown RBP10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 C1orf147Q96MC9 270 aaPredicted RBP10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 J3KT08 172 aa10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 CEACAM8P31997 349 aaPredicted RBP10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 SCRT2Q9NQ03 307 aa10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 FOXI2Q6ZQN5 318 aa10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 ZNF493Q6ZR52 646 aa10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 NKAPP1Q8N9T2 125 aa10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 FAM208BQ5VWN6 2430 aa10.9□□□□□ -0.66
NOTCH1-201ENST00000277541 PSCAO43653 123 aa10.9□□□□□ -0.67
NOTCH1-201ENST00000277541 SAA4P35542 130 aa10.9□□□□□ -0.67
NOTCH1-201ENST00000277541 ZNF561-AS1K7EIQ3 104 aa10.89□□□□□ -0.67
NOTCH1-201ENST00000277541 PFN2P35080 140 aa10.89□□□□□ -0.67
NOTCH1-201ENST00000277541 FAM110DQ8TAY7 271 aaPredicted RBP10.89□□□□□ -0.67
NOTCH1-201ENST00000277541 Q0VFX4 171 aa10.89□□□□□ -0.67
NOTCH1-201ENST00000277541 KLHL30-AS1Q8NEE0 82 aa10.89□□□□□ -0.67
NOTCH1-201ENST00000277541 PRSS47A8MTI9 375 aa10.89□□□□□ -0.67
NOTCH1-201ENST00000277541 EGR2P11161 476 aaPredicted RBP10.89□□□□□ -0.67
NOTCH1-201ENST00000277541 ZNF747Q9BV97 191 aa10.89□□□□□ -0.67
NOTCH1-201ENST00000277541 RHOHQ15669 191 aa10.88□□□□□ -0.67
NOTCH1-201ENST00000277541 CFHR4Q92496 578 aa10.88□□□□□ -0.67
NOTCH1-201ENST00000277541 RNF166Q96A37 237 aaPredicted RBP10.88□□□□□ -0.67
NOTCH1-201ENST00000277541 NDUFC2O95298 119 aa10.88□□□□□ -0.67
NOTCH1-201ENST00000277541 Q8TCH9 128 aa10.88□□□□□ -0.67
NOTCH1-201ENST00000277541 TEX48A0A1B0GUV7 120 aa10.88□□□□□ -0.67
NOTCH1-201ENST00000277541 TMEM243Q9BU79 118 aa10.88□□□□□ -0.67
NOTCH1-201ENST00000277541 VWC2Q2TAL6 325 aa10.88□□□□□ -0.67
NOTCH1-201ENST00000277541 MDS2Q8NDY4 140 aa10.88□□□□□ -0.67
NOTCH1-201ENST00000277541 MYO18BQ8IUG5 2567 aa10.88□□□□□ -0.67
NOTCH1-201ENST00000277541 TRAV12-1A0A0B4J245 112 aa10.88□□□□□ -0.67
NOTCH1-201ENST00000277541 IGHV1OR15-1A0A075B7D0 117 aa10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 A0A0G2JNJ9 132 aa10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 Q9UFV3 132 aa10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 MBD3L4A6NDZ8 208 aaPredicted RBP10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 MBD3L3A6NE82 208 aaPredicted RBP10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 MBD3L5A6NJ08 208 aaPredicted RBP10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 CFC1BP0CG36 223 aa10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 CFC1P0CG37 223 aa10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 MBD3L2Q8NHZ7 208 aaPredicted RBP10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 ORMDL1Q9P0S3 153 aa10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 CUL9Q8IWT3 2517 aa10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 IGKV1-39P01597 117 aa10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 IGKV1D-39P04432 117 aa10.87□□□□□ -0.67
NOTCH1-201ENST00000277541 SYNJ2BPP57105 145 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms